RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 XAGE2Q96GT9 111 aa17.45■□□□□ 0.38
IFT43-209ENST00000555305 FAM227BQ96M60 508 aa17.45■□□□□ 0.38
IFT43-209ENST00000555305 BCL11BQ9C0K0 894 aaPredicted RBP17.45■□□□□ 0.38
IFT43-209ENST00000555305 NARFQ9UHQ1 456 aa17.45■□□□□ 0.38
IFT43-209ENST00000555305 BTAF1O14981 1849 aa17.44■□□□□ 0.38
IFT43-209ENST00000555305 PUM3Q15397 648 aaKnown RBP17.44■□□□□ 0.38
IFT43-209ENST00000555305 SYNE4Q8N205 404 aa17.44■□□□□ 0.38
IFT43-209ENST00000555305 GBP4Q96PP9 640 aa17.44■□□□□ 0.38
IFT43-209ENST00000555305 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
IFT43-209ENST00000555305 RTCBQ9Y3I0 505 aaKnown RBP17.44■□□□□ 0.38
IFT43-209ENST00000555305 RIC1Q4ADV7 1423 aa17.44■□□□□ 0.38
IFT43-209ENST00000555305 MYH14Q7Z406 1995 aaKnown RBP17.44■□□□□ 0.38
IFT43-209ENST00000555305 A0A0D9SFI3 127 aa17.43■□□□□ 0.38
IFT43-209ENST00000555305 SSFA2P28290 1259 aa17.43■□□□□ 0.38
IFT43-209ENST00000555305 IGHMBP2P38935 993 aaKnown RBP17.43■□□□□ 0.38
IFT43-209ENST00000555305 KRT32Q14532 448 aa17.43■□□□□ 0.38
IFT43-209ENST00000555305 RAB3GAP1Q15042 981 aa17.43■□□□□ 0.38
IFT43-209ENST00000555305 CCDC85AQ96PX6 553 aaPredicted RBP17.43■□□□□ 0.38
IFT43-209ENST00000555305 CDC5LQ99459 802 aaKnown RBP17.43■□□□□ 0.38
IFT43-209ENST00000555305 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
IFT43-209ENST00000555305 LAMB2P55268 1798 aa17.43■□□□□ 0.38
IFT43-209ENST00000555305 ZPR1O75312 459 aa17.43■□□□□ 0.38
IFT43-209ENST00000555305 TTF1Q15361 905 aaPredicted RBP17.43■□□□□ 0.38
IFT43-209ENST00000555305 TSGA10IPQ3SY00 556 aa17.43■□□□□ 0.38
IFT43-209ENST00000555305 VGLL2Q8N8G2 317 aa17.43■□□□□ 0.38
IFT43-209ENST00000555305 LPIN2Q92539 896 aa17.43■□□□□ 0.38
IFT43-209ENST00000555305 RBM8AQ9Y5S9 174 aaKnown RBP17.43■□□□□ 0.38
IFT43-209ENST00000555305 SCN7AQ01118 1682 aa17.43■□□□□ 0.38
IFT43-209ENST00000555305 DDX11L8A8MPP1 907 aa17.42■□□□□ 0.38
IFT43-209ENST00000555305 GOLIM4O00461 696 aa17.42■□□□□ 0.38
IFT43-209ENST00000555305 FRAT2O75474 233 aaPredicted RBP17.42■□□□□ 0.38
IFT43-209ENST00000555305 UQCRFS1P1P0C7P4 283 aa17.42■□□□□ 0.38
IFT43-209ENST00000555305 PTH1RQ03431 593 aa17.42■□□□□ 0.38
IFT43-209ENST00000555305 USPL1Q5W0Q7 1092 aa17.42■□□□□ 0.38
IFT43-209ENST00000555305 FAM196AQ6ZSG2 479 aa17.42■□□□□ 0.38
IFT43-209ENST00000555305 DDX46Q7L014 1031 aaKnown RBP17.42■□□□□ 0.38
IFT43-209ENST00000555305 QTRT2Q9H974 415 aaKnown RBP17.42■□□□□ 0.38
IFT43-209ENST00000555305 TAF5LO75529 589 aa17.41■□□□□ 0.38
IFT43-209ENST00000555305 ADRA2BP18089 450 aa17.41■□□□□ 0.38
IFT43-209ENST00000555305 CUL4AQ13619 759 aa17.41■□□□□ 0.38
IFT43-209ENST00000555305 VPS53Q5VIR6 699 aa17.41■□□□□ 0.38
IFT43-209ENST00000555305 ZSCAN25Q6NSZ9 544 aa17.41■□□□□ 0.38
IFT43-209ENST00000555305 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
IFT43-209ENST00000555305 TMX3Q96JJ7 454 aa17.41■□□□□ 0.38
IFT43-209ENST00000555305 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.41■□□□□ 0.38
IFT43-209ENST00000555305 CYP46A1Q9Y6A2 500 aa17.41■□□□□ 0.38
IFT43-209ENST00000555305 GNPATO15228 680 aa17.4■□□□□ 0.38
IFT43-209ENST00000555305 RNF113AO15541 343 aaKnown RBP17.4■□□□□ 0.38
IFT43-209ENST00000555305 SLC5A1P13866 664 aa17.4■□□□□ 0.38
IFT43-209ENST00000555305 HCLS1P14317 486 aaPredicted RBP17.4■□□□□ 0.38
IFT43-209ENST00000555305 SF3B3Q15393 1217 aaKnown RBP17.4■□□□□ 0.38
IFT43-209ENST00000555305 SLC10A5Q5PT55 438 aa17.4■□□□□ 0.38
IFT43-209ENST00000555305 CREB3L3Q68CJ9 461 aa17.4■□□□□ 0.38
IFT43-209ENST00000555305 ZSWIM6Q9HCJ5 1215 aa17.4■□□□□ 0.38
IFT43-209ENST00000555305 LY75O60449 1722 aa17.4■□□□□ 0.38
IFT43-209ENST00000555305 ANKRD1Q15327 319 aa17.4■□□□□ 0.38
IFT43-209ENST00000555305 ZMYM1Q5SVZ6 1142 aa17.4■□□□□ 0.38
IFT43-209ENST00000555305 SETDB2Q96T68 719 aa17.4■□□□□ 0.38
IFT43-209ENST00000555305 GTF2E1P29083 439 aaPredicted RBP17.39■□□□□ 0.37
IFT43-209ENST00000555305 SLC27A3Q5K4L6 730 aa17.39■□□□□ 0.37
IFT43-209ENST00000555305 RASEFQ8IZ41 740 aa17.39■□□□□ 0.37
IFT43-209ENST00000555305 EDC3Q96F86 508 aaKnown RBP17.39■□□□□ 0.37
IFT43-209ENST00000555305 ZSCAN31Q96LW9 406 aaPredicted RBP17.39■□□□□ 0.37
IFT43-209ENST00000555305 DSCC1Q9BVC3 393 aa17.39■□□□□ 0.37
IFT43-209ENST00000555305 UPF3BQ9BZI7 483 aaKnown RBP17.39■□□□□ 0.37
IFT43-209ENST00000555305 LIMCH1Q9UPQ0 1083 aa17.39■□□□□ 0.37
IFT43-209ENST00000555305 SLC27A2O14975 620 aa17.38■□□□□ 0.37
IFT43-209ENST00000555305 CASTP20810 708 aaKnown RBP17.38■□□□□ 0.37
IFT43-209ENST00000555305 MCM4P33991 863 aa17.38■□□□□ 0.37
IFT43-209ENST00000555305 FKBP4Q02790 459 aaKnown RBP eCLIP17.38■□□□□ 0.37
IFT43-209ENST00000555305 CLEC17AQ6ZS10 378 aa17.38■□□□□ 0.37
IFT43-209ENST00000555305 RUFY3Q7L099 469 aa17.38■□□□□ 0.37
IFT43-209ENST00000555305 TTC14Q96N46 770 aa17.38■□□□□ 0.37
IFT43-209ENST00000555305 ALDH8A1Q9H2A2 487 aaPredicted RBP17.38■□□□□ 0.37
IFT43-209ENST00000555305 SH2B1Q9NRF2 756 aaPredicted RBP17.38■□□□□ 0.37
IFT43-209ENST00000555305 FGFR2P21802 821 aa17.38■□□□□ 0.37
IFT43-209ENST00000555305 ARID4AP29374 1257 aaPredicted RBP17.38■□□□□ 0.37
IFT43-209ENST00000555305 TPTE2Q6XPS3 522 aa17.38■□□□□ 0.37
IFT43-209ENST00000555305 JAKMIP1Q96N16 626 aaKnown RBP17.38■□□□□ 0.37
IFT43-209ENST00000555305 DDX60Q8IY21 1712 aaKnown RBP17.37■□□□□ 0.37
IFT43-209ENST00000555305 RPAP1Q9BWH6 1393 aaPredicted RBP17.37■□□□□ 0.37
IFT43-209ENST00000555305 FAM177BA6PVY3 158 aa17.37■□□□□ 0.37
IFT43-209ENST00000555305 GOLGA6L22H0YM25 854 aa17.37■□□□□ 0.37
IFT43-209ENST00000555305 PDIA4P13667 645 aaKnown RBP17.37■□□□□ 0.37
IFT43-209ENST00000555305 ADORA1P30542 326 aa17.37■□□□□ 0.37
IFT43-209ENST00000555305 TRAPPC3LQ5T215 181 aa17.37■□□□□ 0.37
IFT43-209ENST00000555305 ZNF589Q86UQ0 364 aaPredicted RBP17.37■□□□□ 0.37
IFT43-209ENST00000555305 PDRG1Q9NUG6 133 aa17.37■□□□□ 0.37
IFT43-209ENST00000555305 HMGB1P09429 215 aaKnown RBP17.36■□□□□ 0.37
IFT43-209ENST00000555305 ZNF772Q68DY9 489 aaPredicted RBP17.36■□□□□ 0.37
IFT43-209ENST00000555305 ANKRD18AQ8IVF6 992 aa17.36■□□□□ 0.37
IFT43-209ENST00000555305 TNPO1Q92973 898 aaKnown RBP17.36■□□□□ 0.37
IFT43-209ENST00000555305 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.36■□□□□ 0.37
IFT43-209ENST00000555305 RFC4P35249 363 aa17.35■□□□□ 0.37
IFT43-209ENST00000555305 BLOC1S2Q6QNY1 142 aa17.35■□□□□ 0.37
IFT43-209ENST00000555305 PTF1AQ7RTS3 328 aa17.35■□□□□ 0.37
IFT43-209ENST00000555305 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
IFT43-209ENST00000555305 FOXD4L1Q9NU39 408 aa17.35■□□□□ 0.37
IFT43-209ENST00000555305 CTNNA3Q9UI47 895 aa17.35■□□□□ 0.37
IFT43-209ENST00000555305 SBF2Q86WG5 1849 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms