RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 MPNDQ8N594 471 aa17.73■□□□□ 0.43
CHD8-208ENST00000555301 PA2G4Q9UQ80 394 aaKnown RBP17.73■□□□□ 0.43
CHD8-208ENST00000555301 RIPOR2Q9Y4F9 1068 aa17.73■□□□□ 0.43
CHD8-208ENST00000555301 PCDHB15Q9Y5E8 787 aa17.73■□□□□ 0.43
CHD8-208ENST00000555301 CHRNDQ07001 517 aa17.72■□□□□ 0.43
CHD8-208ENST00000555301 G3BP1Q13283 466 aaKnown RBP eCLIP17.72■□□□□ 0.431e-7■■■□□ 18.8
CHD8-208ENST00000555301 LRRC24Q50LG9 513 aa17.72■□□□□ 0.43
CHD8-208ENST00000555301 OLFM4Q6UX06 510 aa17.72■□□□□ 0.43
CHD8-208ENST00000555301 DPP8Q6V1X1 898 aaPredicted RBP17.72■□□□□ 0.43
CHD8-208ENST00000555301 PUS3Q9BZE2 481 aaKnown RBP17.72■□□□□ 0.43
CHD8-208ENST00000555301 SIL1Q9H173 461 aa17.72■□□□□ 0.43
CHD8-208ENST00000555301 PODXL2Q9NZ53 605 aa17.72■□□□□ 0.43
CHD8-208ENST00000555301 ANKIB1Q9P2G1 1089 aa17.72■□□□□ 0.43
CHD8-208ENST00000555301 NSFL1CQ9UNZ2 370 aaKnown RBP17.72■□□□□ 0.43
CHD8-208ENST00000555301 XDHP47989 1333 aa17.72■□□□□ 0.43
CHD8-208ENST00000555301 COL4A1P02462 1669 aa17.71■□□□□ 0.43
CHD8-208ENST00000555301 SURF6O75683 361 aaKnown RBP17.71■□□□□ 0.43
CHD8-208ENST00000555301 GPSM2P81274 684 aa17.71■□□□□ 0.43
CHD8-208ENST00000555301 HSP90AB4PQ58FF6 505 aa17.71■□□□□ 0.43
CHD8-208ENST00000555301 NOP58Q9Y2X3 529 aaKnown RBP17.71■□□□□ 0.43
CHD8-208ENST00000555301 BRCA1P38398 1863 aaKnown RBP17.71■□□□□ 0.43
CHD8-208ENST00000555301 FKBP4Q02790 459 aaKnown RBP eCLIP17.7■□□□□ 0.42
CHD8-208ENST00000555301 METTL24Q5JXM2 366 aa17.7■□□□□ 0.42
CHD8-208ENST00000555301 ARHGAP27Q6ZUM4 889 aa17.7■□□□□ 0.42
CHD8-208ENST00000555301 ATG9AQ7Z3C6 839 aa17.7■□□□□ 0.42
CHD8-208ENST00000555301 SUPT20HQ8NEM7 779 aa17.7■□□□□ 0.42
CHD8-208ENST00000555301 PSMD1Q99460 953 aa17.7■□□□□ 0.42
CHD8-208ENST00000555301 SLX4Q8IY92 1834 aa17.7■□□□□ 0.42
CHD8-208ENST00000555301 ATP2B4P23634 1241 aa17.69■□□□□ 0.42
CHD8-208ENST00000555301 OS9Q13438 667 aaPredicted RBP17.69■□□□□ 0.42
CHD8-208ENST00000555301 HDAC1Q13547 482 aaPredicted RBP17.69■□□□□ 0.42
CHD8-208ENST00000555301 SLC51AQ86UW1 340 aa17.69■□□□□ 0.42
CHD8-208ENST00000555301 RTFDC1Q9BY42 306 aaPredicted RBP17.69■□□□□ 0.42
CHD8-208ENST00000555301 TAOK3Q9H2K8 898 aa17.69■□□□□ 0.42
CHD8-208ENST00000555301 CEP126Q9P2H0 1117 aa17.69■□□□□ 0.42
CHD8-208ENST00000555301 GGA1Q9UJY5 639 aa17.69■□□□□ 0.42
CHD8-208ENST00000555301 LEMD3Q9Y2U8 911 aa17.69■□□□□ 0.42
CHD8-208ENST00000555301 SNED1Q8TER0 1413 aa17.69■□□□□ 0.42
CHD8-208ENST00000555301 LTBP3Q9NS15 1303 aa17.69■□□□□ 0.42
CHD8-208ENST00000555301 NFKBIEO00221 500 aa17.68■□□□□ 0.42
CHD8-208ENST00000555301 PDE8BO95263 885 aa17.68■□□□□ 0.42
CHD8-208ENST00000555301 ERC1Q8IUD2 1116 aa17.68■□□□□ 0.42
CHD8-208ENST00000555301 RWDD1Q9H446 243 aaPredicted RBP17.68■□□□□ 0.42
CHD8-208ENST00000555301 C6orf229H3BNL8 230 aa17.67■□□□□ 0.42
CHD8-208ENST00000555301 TAF5LO75529 589 aa17.67■□□□□ 0.42
CHD8-208ENST00000555301 UFL1O94874 794 aa17.67■□□□□ 0.42
CHD8-208ENST00000555301 KCNJ4P48050 445 aa17.67■□□□□ 0.42
CHD8-208ENST00000555301 HELBQ8NG08 1087 aaPredicted RBP17.67■□□□□ 0.42
CHD8-208ENST00000555301 TBC1D16Q8TBP0 767 aa17.67■□□□□ 0.42
CHD8-208ENST00000555301 EYA3Q99504 573 aa17.67■□□□□ 0.42
CHD8-208ENST00000555301 VPS33BQ9H267 617 aa17.67■□□□□ 0.42
CHD8-208ENST00000555301 EXOC6BQ9Y2D4 811 aa17.67■□□□□ 0.42
CHD8-208ENST00000555301 RAB11FIP3O75154 756 aa17.66■□□□□ 0.42
CHD8-208ENST00000555301 UBE4AQ14139 1066 aa17.66■□□□□ 0.42
CHD8-208ENST00000555301 ERICH6BQ5W0A0 696 aa17.66■□□□□ 0.42
CHD8-208ENST00000555301 VGLL2Q8N8G2 317 aa17.66■□□□□ 0.42
CHD8-208ENST00000555301 DCTPP1Q9H773 170 aa17.66■□□□□ 0.42
CHD8-208ENST00000555301 POLLQ9UGP5 575 aa17.66■□□□□ 0.42
CHD8-208ENST00000555301 LRRC37AA6NMS7 1700 aa17.66■□□□□ 0.42
CHD8-208ENST00000555301 ZNF804BA4D1E1 1349 aa17.66■□□□□ 0.42
CHD8-208ENST00000555301 GOLGB1Q14789 3259 aaKnown RBP17.65■□□□□ 0.42
CHD8-208ENST00000555301 PUM3Q15397 648 aaKnown RBP17.65■□□□□ 0.42
CHD8-208ENST00000555301 AKAP2Q9Y2D5 859 aa17.65■□□□□ 0.42
CHD8-208ENST00000555301 ARFGEF1Q9Y6D6 1849 aa17.65■□□□□ 0.42
CHD8-208ENST00000555301 SASH1O94885 1247 aa17.64■□□□□ 0.41
CHD8-208ENST00000555301 TFCP2Q12800 502 aa17.64■□□□□ 0.41
CHD8-208ENST00000555301 WASHC4Q2M389 1173 aa17.64■□□□□ 0.41
CHD8-208ENST00000555301 LPIN2Q92539 896 aa17.64■□□□□ 0.41
CHD8-208ENST00000555301 GCC1Q96CN9 775 aa17.64■□□□□ 0.41
CHD8-208ENST00000555301 KIF1BPQ96EK5 621 aa17.64■□□□□ 0.41
CHD8-208ENST00000555301 ZC3H12CQ9C0D7 883 aaKnown RBP17.64■□□□□ 0.41
CHD8-208ENST00000555301 TAF1P21675 1872 aa17.64■□□□□ 0.41
CHD8-208ENST00000555301 LMNB1P20700 586 aa17.63■□□□□ 0.41
CHD8-208ENST00000555301 IARSP41252 1262 aaKnown RBP17.63■□□□□ 0.41
CHD8-208ENST00000555301 RASSF7Q02833 373 aa17.63■□□□□ 0.41
CHD8-208ENST00000555301 KIAA2012Q0VF49 1180 aa17.63■□□□□ 0.41
CHD8-208ENST00000555301 RHPN1Q8TCX5 695 aa17.63■□□□□ 0.41
CHD8-208ENST00000555301 GPR108Q9NPR9 543 aa17.63■□□□□ 0.41
CHD8-208ENST00000555301 ZNF277Q9NRM2 450 aaPredicted RBP17.63■□□□□ 0.41
CHD8-208ENST00000555301 MED23Q9ULK4 1368 aa17.63■□□□□ 0.41
CHD8-208ENST00000555301 PPIP5K2O43314 1243 aa17.62■□□□□ 0.41
CHD8-208ENST00000555301 IFIT1P09914 478 aaKnown RBP17.62■□□□□ 0.41
CHD8-208ENST00000555301 FGFR2P21802 821 aa17.62■□□□□ 0.41
CHD8-208ENST00000555301 ATP2B3Q16720 1220 aa17.62■□□□□ 0.41
CHD8-208ENST00000555301 C15orf52Q6ZUT6 534 aaKnown RBP17.62■□□□□ 0.41
CHD8-208ENST00000555301 CACNA1SQ13698 1873 aa17.62■□□□□ 0.41
CHD8-208ENST00000555301 SNAP23O00161 211 aa17.61■□□□□ 0.41
CHD8-208ENST00000555301 SLC5A1P13866 664 aa17.61■□□□□ 0.41
CHD8-208ENST00000555301 LARGE2Q8N3Y3 721 aa17.61■□□□□ 0.41
CHD8-208ENST00000555301 LRRCC1Q9C099 1032 aa17.61■□□□□ 0.41
CHD8-208ENST00000555301 DUOX1Q9NRD9 1551 aa17.61■□□□□ 0.41
CHD8-208ENST00000555301 WTIPA6NIX2 430 aaPredicted RBP17.6■□□□□ 0.41
CHD8-208ENST00000555301 APBB1O00213 710 aa17.6■□□□□ 0.41
CHD8-208ENST00000555301 RIMBP2O15034 1052 aa17.6■□□□□ 0.41
CHD8-208ENST00000555301 IGHDP01880 384 aa17.6■□□□□ 0.41
CHD8-208ENST00000555301 AOC3Q16853 763 aa17.6■□□□□ 0.41
CHD8-208ENST00000555301 CLASRPQ8N2M8 674 aaKnown RBP17.6■□□□□ 0.41
CHD8-208ENST00000555301 JDP2Q8WYK2 163 aa17.6■□□□□ 0.41
CHD8-208ENST00000555301 GPR101Q96P66 508 aaPredicted RBP17.6■□□□□ 0.41
CHD8-208ENST00000555301 LTBP1Q14766 1721 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms