RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 C9orf131Q5VYM1 1079 aa21.7■■□□□ 1.06
PSEN1-212ENST00000555254 C7orf43Q8WVR3 580 aa21.7■■□□□ 1.06
PSEN1-212ENST00000555254 CCDC85AQ96PX6 553 aaPredicted RBP21.7■■□□□ 1.06
PSEN1-212ENST00000555254 BRCA1P38398 1863 aaKnown RBP21.69■■□□□ 1.06
PSEN1-212ENST00000555254 PPEF1O14829 653 aaPredicted RBP21.69■■□□□ 1.06
PSEN1-212ENST00000555254 SMARCA5O60264 1052 aaPredicted RBP21.69■■□□□ 1.06
PSEN1-212ENST00000555254 CCDC57Q2TAC2 916 aa21.69■■□□□ 1.06
PSEN1-212ENST00000555254 CCDC93Q567U6 631 aa21.69■■□□□ 1.06
PSEN1-212ENST00000555254 RNF181Q9P0P0 153 aa21.69■■□□□ 1.06
PSEN1-212ENST00000555254 NFKBIEO00221 500 aa21.68■■□□□ 1.06
PSEN1-212ENST00000555254 APLP1P51693 650 aa21.68■■□□□ 1.06
PSEN1-212ENST00000555254 SF3B3Q15393 1217 aaKnown RBP21.68■■□□□ 1.06
PSEN1-212ENST00000555254 TAF7LQ5H9L4 462 aa21.68■■□□□ 1.06
PSEN1-212ENST00000555254 RHPN1Q8TCX5 695 aa21.68■■□□□ 1.06
PSEN1-212ENST00000555254 TMX4Q9H1E5 349 aaPredicted RBP21.68■■□□□ 1.06
PSEN1-212ENST00000555254 COPRSQ9NQ92 184 aa21.68■■□□□ 1.06
PSEN1-212ENST00000555254 PA2G4Q9UQ80 394 aaKnown RBP21.68■■□□□ 1.06
PSEN1-212ENST00000555254 DLEC1Q9Y238 1755 aa21.68■■□□□ 1.06
PSEN1-212ENST00000555254 PCNTO95613 3336 aa21.67■■□□□ 1.06
PSEN1-212ENST00000555254 TNS4Q8IZW8 715 aa21.67■■□□□ 1.06
PSEN1-212ENST00000555254 KIF3CO14782 793 aa21.66■■□□□ 1.06
PSEN1-212ENST00000555254 BBOX1O75936 387 aa21.66■■□□□ 1.06
PSEN1-212ENST00000555254 CSF1RP07333 972 aa21.66■■□□□ 1.06
PSEN1-212ENST00000555254 LMNB1P20700 586 aa21.66■■□□□ 1.06
PSEN1-212ENST00000555254 CTSWP56202 376 aa21.66■■□□□ 1.06
PSEN1-212ENST00000555254 IFIT5Q13325 482 aaKnown RBP21.66■■□□□ 1.06
PSEN1-212ENST00000555254 GRAPQ13588 217 aa21.66■■□□□ 1.06
PSEN1-212ENST00000555254 SLC51AQ86UW1 340 aa21.66■■□□□ 1.06
PSEN1-212ENST00000555254 RTKN2Q8IZC4 609 aa21.66■■□□□ 1.06
PSEN1-212ENST00000555254 GRAPLQ8TC17 118 aaPredicted RBP21.66■■□□□ 1.06
PSEN1-212ENST00000555254 TAOK3Q9H2K8 898 aa21.66■■□□□ 1.06
PSEN1-212ENST00000555254 SLX4Q8IY92 1834 aa21.66■■□□□ 1.06
PSEN1-212ENST00000555254 RFX5P48382 616 aaPredicted RBP21.65■■□□□ 1.06
PSEN1-212ENST00000555254 CCDC152Q4G0S7 254 aa21.65■■□□□ 1.06
PSEN1-212ENST00000555254 CLASRPQ8N2M8 674 aaKnown RBP21.65■■□□□ 1.06
PSEN1-212ENST00000555254 SIL1Q9H173 461 aa21.65■■□□□ 1.06
PSEN1-212ENST00000555254 WDR90Q96KV7 1748 aa21.65■■□□□ 1.06
PSEN1-212ENST00000555254 ANKRD18BA2A2Z9 1011 aa21.64■■□□□ 1.05
PSEN1-212ENST00000555254 PTPN12Q05209 780 aaKnown RBP21.64■■□□□ 1.05
PSEN1-212ENST00000555254 SEC31BQ9NQW1 1179 aa21.64■■□□□ 1.05
PSEN1-212ENST00000555254 ATP6V0A2Q9Y487 856 aa21.64■■□□□ 1.05
PSEN1-212ENST00000555254 ARFGEF1Q9Y6D6 1849 aa21.64■■□□□ 1.05
PSEN1-212ENST00000555254 CC2D2BQ6DHV5 1058 aa21.63■■□□□ 1.05
PSEN1-212ENST00000555254 PLEKHM2Q8IWE5 1019 aa21.63■■□□□ 1.05
PSEN1-212ENST00000555254 C16orf71Q8IYS4 520 aaPredicted RBP21.63■■□□□ 1.05
PSEN1-212ENST00000555254 TTLL11Q8NHH1 800 aa21.63■■□□□ 1.05
PSEN1-212ENST00000555254 CELF1Q92879 486 aaKnown RBP21.63■■□□□ 1.05
PSEN1-212ENST00000555254 IL1RAPL2Q9NP60 686 aa21.63■■□□□ 1.05
PSEN1-212ENST00000555254 FBXO3Q9UK99 471 aa21.63■■□□□ 1.05
PSEN1-212ENST00000555254 FKBP4Q02790 459 aaKnown RBP eCLIP21.62■■□□□ 1.05
PSEN1-212ENST00000555254 FAM161AQ3B820 660 aa21.62■■□□□ 1.05
PSEN1-212ENST00000555254 ZNF277Q9NRM2 450 aaPredicted RBP21.62■■□□□ 1.05
PSEN1-212ENST00000555254 IFIT2P09913 472 aaKnown RBP21.61■■□□□ 1.05
PSEN1-212ENST00000555254 IL15P40933 162 aaPredicted RBP21.61■■□□□ 1.05
PSEN1-212ENST00000555254 RPS8P62241 208 aaKnown RBP21.61■■□□□ 1.05
PSEN1-212ENST00000555254 SP8Q8IXZ3 490 aa21.61■■□□□ 1.05
PSEN1-212ENST00000555254 KLHDC4Q8TBB5 520 aa21.61■■□□□ 1.05
PSEN1-212ENST00000555254 GPATCH3Q96I76 525 aa21.61■■□□□ 1.05
PSEN1-212ENST00000555254 EYA2O00167 538 aa21.6■■□□□ 1.05
PSEN1-212ENST00000555254 CIAO1O76071 339 aa21.6■■□□□ 1.05
PSEN1-212ENST00000555254 GREM2Q9H772 168 aa21.6■■□□□ 1.05
PSEN1-212ENST00000555254 LTBP3Q9NS15 1303 aa21.59■■□□□ 1.05
PSEN1-212ENST00000555254 ITGA6P23229 1130 aa21.59■■□□□ 1.05
PSEN1-212ENST00000555254 DDX60Q8IY21 1712 aaKnown RBP21.58■■□□□ 1.05
PSEN1-212ENST00000555254 MX1P20591 662 aa21.58■■□□□ 1.05
PSEN1-212ENST00000555254 PDE1AP54750 535 aa21.58■■□□□ 1.05
PSEN1-212ENST00000555254 GRIPAP1Q4V328 841 aa21.58■■□□□ 1.05
PSEN1-212ENST00000555254 BMP2KLQ5H9B9 411 aa21.58■■□□□ 1.05
PSEN1-212ENST00000555254 DPP8Q6V1X1 898 aaPredicted RBP21.58■■□□□ 1.05
PSEN1-212ENST00000555254 TMC4Q7Z404 712 aa21.58■■□□□ 1.05
PSEN1-212ENST00000555254 CACNA1SQ13698 1873 aa21.58■■□□□ 1.04
PSEN1-212ENST00000555254 SASH1O94885 1247 aa21.57■■□□□ 1.04
PSEN1-212ENST00000555254 AACSQ86V21 672 aa21.57■■□□□ 1.04
PSEN1-212ENST00000555254 ANKRD18AQ8IVF6 992 aa21.57■■□□□ 1.04
PSEN1-212ENST00000555254 MPNDQ8N594 471 aa21.57■■□□□ 1.04
PSEN1-212ENST00000555254 OTUD7AQ8TE49 926 aaPredicted RBP21.57■■□□□ 1.04
PSEN1-212ENST00000555254 ZNF594Q96JF6 807 aaPredicted RBP21.57■■□□□ 1.04
PSEN1-212ENST00000555254 PSMD1Q99460 953 aa21.57■■□□□ 1.04
PSEN1-212ENST00000555254 OSBPL3Q9H4L5 887 aa21.57■■□□□ 1.04
PSEN1-212ENST00000555254 CEP126Q9P2H0 1117 aa21.57■■□□□ 1.04
PSEN1-212ENST00000555254 STAP2Q9UGK3 403 aa21.57■■□□□ 1.04
PSEN1-212ENST00000555254 AOX1Q06278 1338 aa21.56■■□□□ 1.04
PSEN1-212ENST00000555254 TFCP2Q12800 502 aa21.56■■□□□ 1.04
PSEN1-212ENST00000555254 TTC22Q5TAA0 569 aa21.56■■□□□ 1.04
PSEN1-212ENST00000555254 LDHAL6AQ6ZMR3 332 aa21.56■■□□□ 1.04
PSEN1-212ENST00000555254 CDC5LQ99459 802 aaKnown RBP21.56■■□□□ 1.04
PSEN1-212ENST00000555254 CNNM1Q9NRU3 951 aa21.56■■□□□ 1.04
PSEN1-212ENST00000555254 NSFL1CQ9UNZ2 370 aaKnown RBP21.56■■□□□ 1.04
PSEN1-212ENST00000555254 LAMB2P55268 1798 aa21.56■■□□□ 1.04
PSEN1-212ENST00000555254 IARSP41252 1262 aaKnown RBP21.55■■□□□ 1.04
PSEN1-212ENST00000555254 BACH2Q9BYV9 841 aa21.55■■□□□ 1.04
PSEN1-212ENST00000555254 RTL9Q8NET4 1388 aa21.54■■□□□ 1.04
PSEN1-212ENST00000555254 ERC2O15083 957 aa21.54■■□□□ 1.04
PSEN1-212ENST00000555254 IGHMBP2P38935 993 aaKnown RBP21.54■■□□□ 1.04
PSEN1-212ENST00000555254 JMYQ8N9B5 988 aa21.54■■□□□ 1.04
PSEN1-212ENST00000555254 MPHOSPH8Q99549 860 aa21.54■■□□□ 1.04
PSEN1-212ENST00000555254 GPR108Q9NPR9 543 aa21.54■■□□□ 1.04
PSEN1-212ENST00000555254 TSHZ2Q9NRE2 1034 aa21.54■■□□□ 1.04
PSEN1-212ENST00000555254 AKAP2Q9Y2D5 859 aa21.54■■□□□ 1.04
PSEN1-212ENST00000555254 GPSM2P81274 684 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms