RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 RPS8P62241 208 aaKnown RBP13.32□□□□□ -0.28
TDP1-211ENST00000555178 TAF7LQ5H9L4 462 aa13.32□□□□□ -0.28
TDP1-211ENST00000555178 ZNF622Q969S3 477 aaKnown RBP eCLIP13.32□□□□□ -0.28
TDP1-211ENST00000555178 SPON1Q9HCB6 807 aa13.32□□□□□ -0.28
TDP1-211ENST00000555178 TLR7Q9NYK1 1049 aaKnown RBP13.32□□□□□ -0.28
TDP1-211ENST00000555178 PDE6BP35913 854 aa13.31□□□□□ -0.28
TDP1-211ENST00000555178 OS9Q13438 667 aaPredicted RBP13.31□□□□□ -0.28
TDP1-211ENST00000555178 TSHZ3Q63HK5 1081 aa13.31□□□□□ -0.28
TDP1-211ENST00000555178 VGLL2Q8N8G2 317 aa13.31□□□□□ -0.28
TDP1-211ENST00000555178 LRRC37AA6NMS7 1700 aa13.31□□□□□ -0.28
TDP1-211ENST00000555178 G3BP1Q13283 466 aaKnown RBP eCLIP13.31□□□□□ -0.28
TDP1-211ENST00000555178 GRAPQ13588 217 aa13.31□□□□□ -0.28
TDP1-211ENST00000555178 ANKRD18AQ8IVF6 992 aa13.31□□□□□ -0.28
TDP1-211ENST00000555178 GRAPLQ8TC17 118 aaPredicted RBP13.31□□□□□ -0.28
TDP1-211ENST00000555178 EAF2Q96CJ1 260 aaPredicted RBP13.31□□□□□ -0.28
TDP1-211ENST00000555178 GPR101Q96P66 508 aaPredicted RBP13.31□□□□□ -0.28
TDP1-211ENST00000555178 LRRCC1Q9C099 1032 aa13.31□□□□□ -0.28
TDP1-211ENST00000555178 CNNM1Q9NRU3 951 aa13.31□□□□□ -0.28
TDP1-211ENST00000555178 LTBP1Q14766 1721 aa13.3□□□□□ -0.28
TDP1-211ENST00000555178 MINPP1Q9UNW1 487 aa13.3□□□□□ -0.28
TDP1-211ENST00000555178 H0YIN7 160 aa13.29□□□□□ -0.28
TDP1-211ENST00000555178 NPR1P16066 1061 aa13.29□□□□□ -0.28
TDP1-211ENST00000555178 TIMM10P62072 90 aa13.29□□□□□ -0.28
TDP1-211ENST00000555178 CHRNDQ07001 517 aa13.29□□□□□ -0.28
TDP1-211ENST00000555178 RBM17Q96I25 401 aaKnown RBP13.29□□□□□ -0.28
TDP1-211ENST00000555178 HSP90B1P14625 803 aaKnown RBP13.29□□□□□ -0.28
TDP1-211ENST00000555178 KLRK1P26718 216 aa13.29□□□□□ -0.28
TDP1-211ENST00000555178 MASTLQ96GX5 879 aa13.29□□□□□ -0.28
TDP1-211ENST00000555178 CRAMP1Q96RY5 1269 aa13.29□□□□□ -0.28
TDP1-211ENST00000555178 CDC5LQ99459 802 aaKnown RBP13.29□□□□□ -0.28
TDP1-211ENST00000555178 MPHOSPH8Q99549 860 aa13.29□□□□□ -0.28
TDP1-211ENST00000555178 CCDC8Q9H0W5 538 aaPredicted RBP13.29□□□□□ -0.28
TDP1-211ENST00000555178 CIAO1O76071 339 aa13.28□□□□□ -0.28
TDP1-211ENST00000555178 ADORA1P30542 326 aa13.28□□□□□ -0.28
TDP1-211ENST00000555178 IGHMBP2P38935 993 aaKnown RBP13.28□□□□□ -0.28
TDP1-211ENST00000555178 FHDC1Q9C0D6 1143 aaPredicted RBP13.28□□□□□ -0.28
TDP1-211ENST00000555178 BSDC1Q9NW68 430 aaPredicted RBP13.28□□□□□ -0.28
TDP1-211ENST00000555178 DUOX1Q9NRD9 1551 aa13.28□□□□□ -0.28
TDP1-211ENST00000555178 METTL24Q5JXM2 366 aa13.28□□□□□ -0.28
TDP1-211ENST00000555178 PRPF40BQ6NWY9 871 aaKnown RBP13.28□□□□□ -0.28
TDP1-211ENST00000555178 MYO5AQ9Y4I1 1855 aaKnown RBP13.28□□□□□ -0.28
TDP1-211ENST00000555178 CHD4Q14839 1912 aa13.27□□□□□ -0.28
TDP1-211ENST00000555178 RAB11FIP3O75154 756 aa13.27□□□□□ -0.28
TDP1-211ENST00000555178 IL15P40933 162 aaPredicted RBP13.27□□□□□ -0.28
TDP1-211ENST00000555178 GPSM2P81274 684 aa13.27□□□□□ -0.28
TDP1-211ENST00000555178 KIF1BPQ96EK5 621 aa13.27□□□□□ -0.28
TDP1-211ENST00000555178 ARAP2Q8WZ64 1704 aa13.27□□□□□ -0.29
TDP1-211ENST00000555178 SALL3Q9BXA9 1300 aa13.27□□□□□ -0.29
TDP1-211ENST00000555178 PPEF1O14829 653 aaPredicted RBP13.27□□□□□ -0.29
TDP1-211ENST00000555178 TNNI3KQ59H18 835 aa13.27□□□□□ -0.29
TDP1-211ENST00000555178 STYK1Q6J9G0 422 aa13.27□□□□□ -0.29
TDP1-211ENST00000555178 TXNRD3Q86VQ6 643 aa13.27□□□□□ -0.29
TDP1-211ENST00000555178 C7orf43Q8WVR3 580 aa13.27□□□□□ -0.29
TDP1-211ENST00000555178 DBNDD2Q9BQY9 259 aa13.27□□□□□ -0.29
TDP1-211ENST00000555178 FPGT-TNNI3KV9GXZ4 949 aa13.27□□□□□ -0.29
TDP1-211ENST00000555178 PDE8BO95263 885 aa13.26□□□□□ -0.29
TDP1-211ENST00000555178 HSP90AB4PQ58FF6 505 aa13.26□□□□□ -0.29
TDP1-211ENST00000555178 AACSQ86V21 672 aa13.26□□□□□ -0.29
TDP1-211ENST00000555178 PLEKHM2Q8IWE5 1019 aa13.26□□□□□ -0.29
TDP1-211ENST00000555178 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
TDP1-211ENST00000555178 DBNLQ9UJU6 430 aaKnown RBP13.26□□□□□ -0.29
TDP1-211ENST00000555178 ZNF609O15014 1411 aa13.26□□□□□ -0.29
TDP1-211ENST00000555178 FGFR2P21802 821 aa13.25□□□□□ -0.29
TDP1-211ENST00000555178 CEP126Q9P2H0 1117 aa13.25□□□□□ -0.29
TDP1-211ENST00000555178 AKAP11Q9UKA4 1901 aa13.25□□□□□ -0.29
TDP1-211ENST00000555178 A0A1B0GUL7 405 aa13.25□□□□□ -0.29
TDP1-211ENST00000555178 C21orf2O43822 256 aa13.25□□□□□ -0.29
TDP1-211ENST00000555178 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
TDP1-211ENST00000555178 SNED1Q8TER0 1413 aa13.25□□□□□ -0.29
TDP1-211ENST00000555178 CD2APQ9Y5K6 639 aa13.25□□□□□ -0.29
TDP1-211ENST00000555178 NDUFB9Q9Y6M9 179 aa13.25□□□□□ -0.29
TDP1-211ENST00000555178 BBOX1O75936 387 aa13.24□□□□□ -0.29
TDP1-211ENST00000555178 ERC1Q8IUD2 1116 aa13.24□□□□□ -0.29
TDP1-211ENST00000555178 NEUROD6Q96NK8 337 aa13.24□□□□□ -0.29
TDP1-211ENST00000555178 POLLQ9UGP5 575 aa13.24□□□□□ -0.29
TDP1-211ENST00000555178 ATP6V0A2Q9Y487 856 aa13.24□□□□□ -0.29
TDP1-211ENST00000555178 MROH5Q6ZUA9 1318 aa13.24□□□□□ -0.29
TDP1-211ENST00000555178 IRS2Q9Y4H2 1338 aa13.24□□□□□ -0.29
TDP1-211ENST00000555178 TGFB2P61812 414 aa13.24□□□□□ -0.29
TDP1-211ENST00000555178 SYT17Q9BSW7 474 aa13.24□□□□□ -0.29
TDP1-211ENST00000555178 NSFL1CQ9UNZ2 370 aaKnown RBP13.24□□□□□ -0.29
TDP1-211ENST00000555178 FER1L6Q2WGJ9 1857 aa13.23□□□□□ -0.29
TDP1-211ENST00000555178 ALDH1B1P30837 517 aa13.23□□□□□ -0.29
TDP1-211ENST00000555178 ATP2B3Q16720 1220 aa13.23□□□□□ -0.29
TDP1-211ENST00000555178 SP8Q8IXZ3 490 aa13.23□□□□□ -0.29
TDP1-211ENST00000555178 TTLL6Q8N841 843 aa13.23□□□□□ -0.29
TDP1-211ENST00000555178 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
TDP1-211ENST00000555178 ARFGEF1Q9Y6D6 1849 aa13.23□□□□□ -0.29
TDP1-211ENST00000555178 GSPT1P15170 499 aaKnown RBP13.23□□□□□ -0.29
TDP1-211ENST00000555178 MX1P20591 662 aa13.23□□□□□ -0.29
TDP1-211ENST00000555178 PDE1AP54750 535 aa13.23□□□□□ -0.29
TDP1-211ENST00000555178 CLASRPQ8N2M8 674 aaKnown RBP13.23□□□□□ -0.29
TDP1-211ENST00000555178 XAGE2Q96GT9 111 aa13.23□□□□□ -0.29
TDP1-211ENST00000555178 GYG1P46976 350 aa13.22□□□□□ -0.29
TDP1-211ENST00000555178 SCARF1Q14162 830 aa13.22□□□□□ -0.29
TDP1-211ENST00000555178 CNKSR1Q969H4 720 aa13.22□□□□□ -0.29
TDP1-211ENST00000555178 ANKIB1Q9P2G1 1089 aa13.22□□□□□ -0.29
TDP1-211ENST00000555178 MYH13Q9UKX3 1938 aa13.22□□□□□ -0.29
TDP1-211ENST00000555178 MAP4K4O95819 1239 aaPredicted RBP13.21□□□□□ -0.29
TDP1-211ENST00000555178 BCAMP50895 628 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms