RNA–Protein interactions for RNA: ENST00000555137.5

HNRNPC-216, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-216ENST00000555137 RBM26Q5T8P6 1007 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-216ENST00000555137 KRT26Q7Z3Y9 468 aa12.55□□□□□ -0.4
HNRNPC-216ENST00000555137 MCOLN1Q9GZU1 580 aa12.55□□□□□ -0.4
HNRNPC-216ENST00000555137 PHAXQ9H814 394 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-216ENST00000555137 SEC31BQ9NQW1 1179 aa12.55□□□□□ -0.4
HNRNPC-216ENST00000555137 HYPKQ9NX55 129 aa12.55□□□□□ -0.4
HNRNPC-216ENST00000555137 FAM155AB1AL88 458 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-216ENST00000555137 ZNF853P0CG23 659 aa12.54□□□□□ -0.4
HNRNPC-216ENST00000555137 RPS8P62241 208 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-216ENST00000555137 NOGQ13253 232 aa12.54□□□□□ -0.4
HNRNPC-216ENST00000555137 WDR43Q15061 677 aaKnown RBP eCLIP12.54□□□□□ -0.4
HNRNPC-216ENST00000555137 JARID2Q92833 1246 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-216ENST00000555137 RPS12P25398 132 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-216ENST00000555137 RGS19P49795 217 aa12.53□□□□□ -0.4
HNRNPC-216ENST00000555137 ZBTB38Q8NAP3 1195 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-216ENST00000555137 GBA2Q9HCG7 927 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-216ENST00000555137 GGA3Q9NZ52 723 aa12.53□□□□□ -0.4
HNRNPC-216ENST00000555137 PODXL2Q9NZ53 605 aa12.53□□□□□ -0.4
HNRNPC-216ENST00000555137 ELL2O00472 640 aaPredicted RBP12.52□□□□□ -0.41
HNRNPC-216ENST00000555137 UFL1O94874 794 aa12.52□□□□□ -0.41
HNRNPC-216ENST00000555137 VIL1P09327 827 aaKnown RBP12.52□□□□□ -0.41
HNRNPC-216ENST00000555137 KIF4BQ2VIQ3 1234 aa12.52□□□□□ -0.41
HNRNPC-216ENST00000555137 RGMBQ6NW40 437 aa12.52□□□□□ -0.41
HNRNPC-216ENST00000555137 RIC3Q7Z5B4 369 aa12.52□□□□□ -0.41
HNRNPC-216ENST00000555137 CCDC85AQ96PX6 553 aaPredicted RBP12.52□□□□□ -0.41
HNRNPC-216ENST00000555137 EYA3Q99504 573 aa12.52□□□□□ -0.41
HNRNPC-216ENST00000555137 MYD88Q99836 296 aa12.52□□□□□ -0.41
HNRNPC-216ENST00000555137 PSME4Q14997 1843 aa12.52□□□□□ -0.41
HNRNPC-216ENST00000555137 WTIPA6NIX2 430 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-216ENST00000555137 ZEB1P37275 1124 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-216ENST00000555137 MLLT1Q03111 559 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-216ENST00000555137 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
HNRNPC-216ENST00000555137 DGKZQ13574 1117 aa12.51□□□□□ -0.41
HNRNPC-216ENST00000555137 DCPSQ96C86 337 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-216ENST00000555137 ZC3H12CQ9C0D7 883 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-216ENST00000555137 ZNF609O15014 1411 aa12.51□□□□□ -0.41
HNRNPC-216ENST00000555137 APAF1O14727 1248 aa12.5□□□□□ -0.41
HNRNPC-216ENST00000555137 PCCAP05165 728 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-216ENST00000555137 ZNF280AP59817 542 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-216ENST00000555137 KIF23Q02241 960 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-216ENST00000555137 C2orf69Q8N8R5 385 aa12.5□□□□□ -0.41
HNRNPC-216ENST00000555137 C8orf58Q8NAV2 365 aa12.5□□□□□ -0.41
HNRNPC-216ENST00000555137 CDCA5Q96FF9 252 aa12.5□□□□□ -0.41
HNRNPC-216ENST00000555137 IFT57Q9NWB7 429 aa12.5□□□□□ -0.41
HNRNPC-216ENST00000555137 ANKIB1Q9P2G1 1089 aa12.5□□□□□ -0.41
HNRNPC-216ENST00000555137 GGA1Q9UJY5 639 aa12.5□□□□□ -0.41
HNRNPC-216ENST00000555137 PDE4DIPQ5VU43 2346 aa12.49□□□□□ -0.41
HNRNPC-216ENST00000555137 ZNF646O15015 1829 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-216ENST00000555137 SLC10A3P09131 477 aa12.49□□□□□ -0.41
HNRNPC-216ENST00000555137 ZNF157P51786 506 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-216ENST00000555137 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
HNRNPC-216ENST00000555137 GMLQ99445 158 aa12.49□□□□□ -0.41
HNRNPC-216ENST00000555137 PDE8AO60658 829 aa12.48□□□□□ -0.41
HNRNPC-216ENST00000555137 SLC34A2O95436 690 aa12.48□□□□□ -0.41
HNRNPC-216ENST00000555137 SCARF1Q14162 830 aa12.48□□□□□ -0.41
HNRNPC-216ENST00000555137 CCDC152Q4G0S7 254 aa12.48□□□□□ -0.41
HNRNPC-216ENST00000555137 ANGEL2Q5VTE6 544 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-216ENST00000555137 RSBN1LQ6PCB5 846 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-216ENST00000555137 SULF1Q8IWU6 871 aa12.48□□□□□ -0.41
HNRNPC-216ENST00000555137 TSPYL6Q8N831 410 aa12.48□□□□□ -0.41
HNRNPC-216ENST00000555137 CCDC102AQ96A19 550 aa12.48□□□□□ -0.41
HNRNPC-216ENST00000555137 PRKRIP1Q9H875 184 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-216ENST00000555137 CWC25Q9NXE8 425 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-216ENST00000555137 SCAF8Q9UPN6 1271 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-216ENST00000555137 SPEF2Q9C093 1822 aa12.48□□□□□ -0.41
HNRNPC-216ENST00000555137 XDHP47989 1333 aa12.47□□□□□ -0.41
HNRNPC-216ENST00000555137 TRPA1O75762 1119 aa12.47□□□□□ -0.41
HNRNPC-216ENST00000555137 IGKV5-2P06315 115 aa12.47□□□□□ -0.41
HNRNPC-216ENST00000555137 GNAI1P63096 354 aa12.47□□□□□ -0.41
HNRNPC-216ENST00000555137 AGBL3Q8NEM8 1001 aa12.47□□□□□ -0.41
HNRNPC-216ENST00000555137 CSRNP1Q96S65 589 aa12.47□□□□□ -0.41
HNRNPC-216ENST00000555137 METTL22Q9BUU2 404 aaPredicted RBP12.47□□□□□ -0.41
HNRNPC-216ENST00000555137 RNF186Q9NXI6 227 aa12.47□□□□□ -0.41
HNRNPC-216ENST00000555137 SAGE1Q9NXZ1 904 aa12.47□□□□□ -0.41
HNRNPC-216ENST00000555137 AKAP11Q9UKA4 1901 aa12.47□□□□□ -0.41
HNRNPC-216ENST00000555137 PAPPA2Q9BXP8 1791 aa12.46□□□□□ -0.41
HNRNPC-216ENST00000555137 G3V3G9 751 aa12.46□□□□□ -0.41
HNRNPC-216ENST00000555137 CTSWP56202 376 aa12.46□□□□□ -0.41
HNRNPC-216ENST00000555137 DCAF8Q5TAQ9 597 aa12.46□□□□□ -0.41
HNRNPC-216ENST00000555137 MOB2Q70IA6 237 aa12.46□□□□□ -0.41
HNRNPC-216ENST00000555137 RASAL3Q86YV0 1011 aa12.46□□□□□ -0.41
HNRNPC-216ENST00000555137 ANKRD18AQ8IVF6 992 aa12.46□□□□□ -0.41
HNRNPC-216ENST00000555137 MXD3Q9BW11 206 aa12.46□□□□□ -0.41
HNRNPC-216ENST00000555137 MYOZ2Q9NPC6 264 aa12.46□□□□□ -0.41
HNRNPC-216ENST00000555137 MAP3K2Q9Y2U5 619 aa12.46□□□□□ -0.41
HNRNPC-216ENST00000555137 MYH3P11055 1940 aa12.45□□□□□ -0.42
HNRNPC-216ENST00000555137 USP17L8P0C7I0 530 aa12.45□□□□□ -0.42
HNRNPC-216ENST00000555137 HSP90B1P14625 803 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-216ENST00000555137 PRAMEF18Q5VWM3 479 aa12.45□□□□□ -0.42
HNRNPC-216ENST00000555137 GREM2Q9H772 168 aa12.45□□□□□ -0.42
HNRNPC-216ENST00000555137 MED23Q9ULK4 1368 aa12.44□□□□□ -0.42
HNRNPC-216ENST00000555137 PI4KAP2A4QPH2 592 aa12.44□□□□□ -0.42
HNRNPC-216ENST00000555137 USP17L3A6NCW0 530 aa12.44□□□□□ -0.42
HNRNPC-216ENST00000555137 USP17L4A6NCW7 530 aa12.44□□□□□ -0.42
HNRNPC-216ENST00000555137 ATP2B4P23634 1241 aa12.44□□□□□ -0.42
HNRNPC-216ENST00000555137 CWF19L2Q2TBE0 894 aaKnown RBP12.44□□□□□ -0.42
HNRNPC-216ENST00000555137 NBPF9Q3BBW0 867 aa12.44□□□□□ -0.42
HNRNPC-216ENST00000555137 USP17L1Q7RTZ2 530 aa12.44□□□□□ -0.42
HNRNPC-216ENST00000555137 PODNQ7Z5L7 613 aa12.44□□□□□ -0.42
HNRNPC-216ENST00000555137 TXNRD3Q86VQ6 643 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms