RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 STX8Q9UNK0 236 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 TACC3Q9Y6A5 838 aa7.81□□□□□ -1.16
SYNE2-216ENST00000555002 PDE1CQ14123 709 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-216ENST00000555002 ZHX1Q9UKY1 873 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-216ENST00000555002 SCAPERQ9BY12 1400 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 C11orf95C9JLR9 678 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-216ENST00000555002 TNNI2P48788 182 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 LRRC27Q9C0I9 530 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 RSPH14Q9UHP6 348 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 WDR46O15213 610 aaKnown RBP7.8□□□□□ -1.16
SYNE2-216ENST00000555002 PPP4R3BQ5MIZ7 849 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 CEP57Q86XR8 500 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 WDR63Q8IWG1 891 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 SCAND2PQ9GZW5 306 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-216ENST00000555002 ANKFY1Q9P2R3 1169 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 RAB11FIP3O75154 756 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 ALDH3A1P30838 453 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 ATP2A2P16615 1042 aaKnown RBP7.8□□□□□ -1.16
SYNE2-216ENST00000555002 NUF2Q9BZD4 464 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 TFIP11Q9UBB9 837 aaKnown RBP7.8□□□□□ -1.16
SYNE2-216ENST00000555002 ORC3Q9UBD5 711 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-216ENST00000555002 GINS2Q9Y248 185 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 RFC1P35251 1148 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-216ENST00000555002 C6orf50Q9HD87 102 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 PPP4R4Q6NUP7 873 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 JAG2Q9Y219 1238 aa7.8□□□□□ -1.16
SYNE2-216ENST00000555002 AKNAQ7Z591 1439 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 CTAGE5O15320 804 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 VPS52Q8N1B4 723 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 DNAAF4Q8WXU2 420 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 ACSBG1Q96GR2 724 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 PPP1R12AO14974 1030 aaPredicted RBP7.79□□□□□ -1.16
SYNE2-216ENST00000555002 TMEM57Q8N5G2 664 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 ATP5J2-PTCD1G3V325 749 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 GJA3Q9Y6H8 435 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 LRRC43Q8N309 656 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 IFT81Q8WYA0 676 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 NAIPQ13075 1403 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 GLRX3O76003 335 aaKnown RBP7.79□□□□□ -1.16
SYNE2-216ENST00000555002 LDHCP07864 332 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 TTC14Q96N46 770 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 RMND1Q9NWS8 449 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 GOLGA6L9A6NEM1 432 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 ESPNB1AK53 854 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 BIRC3Q13489 604 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 CEP85LQ5SZL2 805 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 USP25Q9UHP3 1055 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 AGTPBP1Q9UPW5 1226 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 GOLGA1Q92805 767 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 ATP6V0A2Q9Y487 856 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 PRPHP41219 470 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 OGFOD1Q8N543 542 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 PLIN2Q99541 437 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 ZNF644Q9H582 1327 aaPredicted RBP7.79□□□□□ -1.16
SYNE2-216ENST00000555002 TTLL3Q9Y4R7 772 aa7.79□□□□□ -1.16
SYNE2-216ENST00000555002 DAPK3O43293 454 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 POLD1P28340 1107 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 MCM6Q14566 821 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 TSHZ3Q63HK5 1081 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 SLC12A5Q9H2X9 1139 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 MYOM3Q5VTT5 1437 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 DCAF17Q5H9S7 520 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-216ENST00000555002 STK10O94804 968 aaKnown RBP7.78□□□□□ -1.16
SYNE2-216ENST00000555002 WTAPQ15007 396 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 GDPD2Q9HCC8 539 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 KIF21BO75037 1637 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 SYKP43405 635 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 TSTA3Q13630 321 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-216ENST00000555002 LRRC2Q9BYS8 371 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 FAM204AQ9H8W3 233 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 PPARDQ03181 441 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 IARSP41252 1262 aaKnown RBP7.78□□□□□ -1.16
SYNE2-216ENST00000555002 IFIT1BQ5T764 474 aaKnown RBP7.78□□□□□ -1.16
SYNE2-216ENST00000555002 CSPG5O95196 566 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 HMGB1P09429 215 aaKnown RBP7.78□□□□□ -1.16
SYNE2-216ENST00000555002 KCNA4P22459 653 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 MCM7P33993 719 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 GTF2A1P52655 376 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-216ENST00000555002 GSDMDP57764 484 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 RTN1Q16799 776 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 MCM4P33991 863 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 FAM200AQ8TCP9 573 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 CYP7A1P22680 504 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 ITIH3Q06033 890 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 CHMP2AO43633 222 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 GJB2P29033 226 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 STMN2Q93045 179 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 PPME1Q9Y570 386 aa7.78□□□□□ -1.16
SYNE2-216ENST00000555002 RBM27Q9P2N5 1060 aaKnown RBP7.77□□□□□ -1.16
SYNE2-216ENST00000555002 MAP3K2Q9Y2U5 619 aa7.77□□□□□ -1.16
SYNE2-216ENST00000555002 GIPC1O14908 333 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 CASQ2O14958 399 aaPredicted RBP7.77□□□□□ -1.17
SYNE2-216ENST00000555002 TAF7Q15545 349 aaPredicted RBP7.77□□□□□ -1.17
SYNE2-216ENST00000555002 UBLCP1Q8WVY7 318 aaPredicted RBP7.77□□□□□ -1.17
SYNE2-216ENST00000555002 PYM1Q9BRP8 204 aaKnown RBP7.77□□□□□ -1.17
SYNE2-216ENST00000555002 GPHNQ9NQX3 736 aaPredicted RBP7.77□□□□□ -1.17
SYNE2-216ENST00000555002 IRAK4Q9NWZ3 460 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 AK9Q5TCS8 1911 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 STIM2Q9P246 746 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 FAM170AA1A519 330 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms