RNA–Protein interactions for RNA: ENST00000554996.5

CCDC85C-203, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-203ENST00000554996 MEIS3Q99687 375 aa13.16□□□□□ -0.3
CCDC85C-203ENST00000554996 RTFDC1Q9BY42 306 aaPredicted RBP13.16□□□□□ -0.3
CCDC85C-203ENST00000554996 TAF1DQ9H5J8 278 aaPredicted RBP13.16□□□□□ -0.3
CCDC85C-203ENST00000554996 YDJCA8MPS7 323 aa13.15□□□□□ -0.3
CCDC85C-203ENST00000554996 ZBTB7BO15156 539 aaPredicted RBP13.15□□□□□ -0.3
CCDC85C-203ENST00000554996 PPIP5K2O43314 1243 aa13.15□□□□□ -0.3
CCDC85C-203ENST00000554996 SCNN1DP51172 638 aa13.15□□□□□ -0.3
CCDC85C-203ENST00000554996 ITPRIPQ8IWB1 547 aa13.15□□□□□ -0.3
CCDC85C-203ENST00000554996 LARGE2Q8N3Y3 721 aa13.15□□□□□ -0.3
CCDC85C-203ENST00000554996 COG6Q9Y2V7 657 aa13.15□□□□□ -0.3
CCDC85C-203ENST00000554996 BBOX1O75936 387 aa13.14□□□□□ -0.31
CCDC85C-203ENST00000554996 GPSM2P81274 684 aa13.14□□□□□ -0.31
CCDC85C-203ENST00000554996 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
CCDC85C-203ENST00000554996 C9orf78Q9NZ63 289 aaPredicted RBP13.14□□□□□ -0.31
CCDC85C-203ENST00000554996 TRPM7Q96QT4 1865 aa13.13□□□□□ -0.31
CCDC85C-203ENST00000554996 RTL9Q8NET4 1388 aa13.13□□□□□ -0.31
CCDC85C-203ENST00000554996 FOXO4P98177 505 aa13.13□□□□□ -0.31
CCDC85C-203ENST00000554996 KIAA2012Q0VF49 1180 aa13.13□□□□□ -0.31
CCDC85C-203ENST00000554996 RABL6Q3YEC7 729 aaPredicted RBP13.13□□□□□ -0.31
CCDC85C-203ENST00000554996 EPHA10Q5JZY3 1008 aa13.13□□□□□ -0.31
CCDC85C-203ENST00000554996 GPC2Q8N158 579 aa13.13□□□□□ -0.31
CCDC85C-203ENST00000554996 MPNDQ8N594 471 aa13.13□□□□□ -0.31
CCDC85C-203ENST00000554996 SUCLG2Q96I99 432 aa13.13□□□□□ -0.31
CCDC85C-203ENST00000554996 ZBTB40Q9NUA8 1239 aa13.13□□□□□ -0.31
CCDC85C-203ENST00000554996 POLLQ9UGP5 575 aa13.13□□□□□ -0.31
CCDC85C-203ENST00000554996 DDX19BQ9UMR2 479 aa13.13□□□□□ -0.31
CCDC85C-203ENST00000554996 GJA3Q9Y6H8 435 aa13.13□□□□□ -0.31
CCDC85C-203ENST00000554996 SHTN1A0MZ66 631 aa13.12□□□□□ -0.31
CCDC85C-203ENST00000554996 WTIPA6NIX2 430 aaPredicted RBP13.12□□□□□ -0.31
CCDC85C-203ENST00000554996 PDE8AO60658 829 aa13.12□□□□□ -0.31
CCDC85C-203ENST00000554996 CSF1RP07333 972 aa13.12□□□□□ -0.31
CCDC85C-203ENST00000554996 GNAI3P08754 354 aa13.12□□□□□ -0.31
CCDC85C-203ENST00000554996 UBTFL1P0CB47 393 aaPredicted RBP13.12□□□□□ -0.31
CCDC85C-203ENST00000554996 HSP90B1P14625 803 aaKnown RBP13.12□□□□□ -0.31
CCDC85C-203ENST00000554996 EPHX2P34913 555 aa13.12□□□□□ -0.31
CCDC85C-203ENST00000554996 CTSWP56202 376 aa13.12□□□□□ -0.31
CCDC85C-203ENST00000554996 GRIPAP1Q4V328 841 aa13.12□□□□□ -0.31
CCDC85C-203ENST00000554996 NIM1KQ8IY84 436 aa13.12□□□□□ -0.31
CCDC85C-203ENST00000554996 ANKRD44Q8N8A2 993 aa13.12□□□□□ -0.31
CCDC85C-203ENST00000554996 JDP2Q8WYK2 163 aa13.12□□□□□ -0.31
CCDC85C-203ENST00000554996 PASKQ96RG2 1323 aa13.12□□□□□ -0.31
CCDC85C-203ENST00000554996 EPS15P42566 896 aa13.11□□□□□ -0.31
CCDC85C-203ENST00000554996 CXCL9Q07325 125 aa13.11□□□□□ -0.31
CCDC85C-203ENST00000554996 CHADLQ6NUI6 762 aa13.11□□□□□ -0.31
CCDC85C-203ENST00000554996 TTLL11Q8NHH1 800 aa13.11□□□□□ -0.31
CCDC85C-203ENST00000554996 BICC1Q9H694 974 aaKnown RBP13.11□□□□□ -0.31
CCDC85C-203ENST00000554996 GREM2Q9H772 168 aa13.11□□□□□ -0.31
CCDC85C-203ENST00000554996 HACL1Q9UJ83 578 aa13.11□□□□□ -0.31
CCDC85C-203ENST00000554996 LRRFIP2Q9Y608 721 aaKnown RBP13.11□□□□□ -0.31
CCDC85C-203ENST00000554996 IQCA1LA6NCM1 817 aa13.1□□□□□ -0.31
CCDC85C-203ENST00000554996 RAD17O75943 681 aa13.1□□□□□ -0.31
CCDC85C-203ENST00000554996 EIF6P56537 245 aaKnown RBP13.1□□□□□ -0.31
CCDC85C-203ENST00000554996 FMR1Q06787 632 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC85C-203ENST00000554996 MTX1Q13505 466 aa13.1□□□□□ -0.31
CCDC85C-203ENST00000554996 EAPPQ56P03 285 aaPredicted RBP13.1□□□□□ -0.31
CCDC85C-203ENST00000554996 IFFO2Q5TF58 517 aa13.1□□□□□ -0.31
CCDC85C-203ENST00000554996 LDHDQ86WU2 507 aa13.1□□□□□ -0.31
CCDC85C-203ENST00000554996 CRBNQ96SW2 442 aa13.1□□□□□ -0.31
CCDC85C-203ENST00000554996 DBNDD1Q9H9R9 158 aa13.1□□□□□ -0.31
CCDC85C-203ENST00000554996 GNAI2P04899 355 aa13.09□□□□□ -0.31
CCDC85C-203ENST00000554996 RPS8P62241 208 aaKnown RBP13.09□□□□□ -0.31
CCDC85C-203ENST00000554996 FAM161AQ3B820 660 aa13.09□□□□□ -0.31
CCDC85C-203ENST00000554996 CCDC152Q4G0S7 254 aa13.09□□□□□ -0.31
CCDC85C-203ENST00000554996 TMC4Q7Z404 712 aa13.09□□□□□ -0.31
CCDC85C-203ENST00000554996 SUPT20HQ8NEM7 779 aa13.09□□□□□ -0.31
CCDC85C-203ENST00000554996 TBC1D16Q8TBP0 767 aa13.09□□□□□ -0.31
CCDC85C-203ENST00000554996 KLRG1Q96E93 195 aa13.09□□□□□ -0.31
CCDC85C-203ENST00000554996 KCNQ5Q9NR82 932 aa13.09□□□□□ -0.31
CCDC85C-203ENST00000554996 NSFL1CQ9UNZ2 370 aaKnown RBP13.09□□□□□ -0.31
CCDC85C-203ENST00000554996 POLR2AP24928 1970 aaKnown RBP13.09□□□□□ -0.31
CCDC85C-203ENST00000554996 RIMBP2O15034 1052 aa13.08□□□□□ -0.32
CCDC85C-203ENST00000554996 ITGBL1O95965 494 aaPredicted RBP13.08□□□□□ -0.32
CCDC85C-203ENST00000554996 GMPSP49915 693 aaPredicted RBP13.08□□□□□ -0.32
CCDC85C-203ENST00000554996 MAP1SQ66K74 1059 aaPredicted RBP13.08□□□□□ -0.32
CCDC85C-203ENST00000554996 VPS33BQ9H267 617 aa13.08□□□□□ -0.32
CCDC85C-203ENST00000554996 CHMP4BQ9H444 224 aaKnown RBP13.08□□□□□ -0.32
CCDC85C-203ENST00000554996 GPRC5DQ9NZD1 345 aa13.08□□□□□ -0.32
CCDC85C-203ENST00000554996 ZNRF3Q9ULT6 936 aa13.08□□□□□ -0.32
CCDC85C-203ENST00000554996 HDAC5Q9UQL6 1122 aa13.08□□□□□ -0.32
CCDC85C-203ENST00000554996 THSD7BQ9C0I4 1608 aa13.07□□□□□ -0.32
CCDC85C-203ENST00000554996 DOK7Q18PE1 504 aa13.07□□□□□ -0.32
CCDC85C-203ENST00000554996 LMBR1LQ6UX01 489 aa13.07□□□□□ -0.32
CCDC85C-203ENST00000554996 C1orf115Q9H7X2 142 aa13.07□□□□□ -0.32
CCDC85C-203ENST00000554996 PODXL2Q9NZ53 605 aa13.07□□□□□ -0.32
CCDC85C-203ENST00000554996 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
CCDC85C-203ENST00000554996 C6orf229H3BNL8 230 aa13.06□□□□□ -0.32
CCDC85C-203ENST00000554996 PSMD14O00487 310 aa13.06□□□□□ -0.32
CCDC85C-203ENST00000554996 ECE2O60344 883 aa13.06□□□□□ -0.32
CCDC85C-203ENST00000554996 UFL1O94874 794 aa13.06□□□□□ -0.32
CCDC85C-203ENST00000554996 EGFRP00533 1210 aa13.06□□□□□ -0.32
CCDC85C-203ENST00000554996 RFX5P48382 616 aaPredicted RBP13.06□□□□□ -0.32
CCDC85C-203ENST00000554996 AAMPQ13685 434 aa13.06□□□□□ -0.32
CCDC85C-203ENST00000554996 CIAPIN1Q6FI81 312 aa13.06□□□□□ -0.32
CCDC85C-203ENST00000554996 CEP85Q6P2H3 762 aa13.06□□□□□ -0.32
CCDC85C-203ENST00000554996 EXOC6Q8TAG9 804 aa13.06□□□□□ -0.32
CCDC85C-203ENST00000554996 TRPM4Q8TD43 1214 aa13.06□□□□□ -0.32
CCDC85C-203ENST00000554996 TMX4Q9H1E5 349 aaPredicted RBP13.06□□□□□ -0.32
CCDC85C-203ENST00000554996 ITGA6P23229 1130 aa13.05□□□□□ -0.32
CCDC85C-203ENST00000554996 KLRK1P26718 216 aa13.05□□□□□ -0.32
CCDC85C-203ENST00000554996 HIRAP54198 1017 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms