RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 ANKRD36CQ5JPF3 1778 aa17.32■□□□□ 0.36
TUBB3-207ENST00000554927 AKAP11Q9UKA4 1901 aa17.31■□□□□ 0.36
TUBB3-207ENST00000554927 TBC1D8O95759 1140 aa17.31■□□□□ 0.36
TUBB3-207ENST00000554927 ZNF296Q8WUU4 475 aaPredicted RBP17.31■□□□□ 0.36
TUBB3-207ENST00000554927 PLEKHF1Q96S99 279 aa17.31■□□□□ 0.36
TUBB3-207ENST00000554927 ZC3H12CQ9C0D7 883 aaKnown RBP17.31■□□□□ 0.36
TUBB3-207ENST00000554927 DLG5Q8TDM6 1919 aa17.3■□□□□ 0.36
TUBB3-207ENST00000554927 SCARF1Q14162 830 aa17.3■□□□□ 0.36
TUBB3-207ENST00000554927 VIL1P09327 827 aaKnown RBP17.29■□□□□ 0.36
TUBB3-207ENST00000554927 FKBP1BP68106 108 aa17.29■□□□□ 0.36
TUBB3-207ENST00000554927 RTL5Q5HYW3 569 aaPredicted RBP17.29■□□□□ 0.36
TUBB3-207ENST00000554927 TBC1D16Q8TBP0 767 aa17.29■□□□□ 0.36
TUBB3-207ENST00000554927 FAM89AQ96GI7 184 aa17.29■□□□□ 0.36
TUBB3-207ENST00000554927 TAF1P21675 1872 aa17.29■□□□□ 0.36
TUBB3-207ENST00000554927 POLR2AP24928 1970 aaKnown RBP17.28■□□□□ 0.36
TUBB3-207ENST00000554927 LRRC37AA6NMS7 1700 aa17.28■□□□□ 0.36
TUBB3-207ENST00000554927 TTLL12Q14166 644 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-207ENST00000554927 RALBP1Q15311 655 aa17.28■□□□□ 0.36
TUBB3-207ENST00000554927 GCC1Q96CN9 775 aa17.28■□□□□ 0.36
TUBB3-207ENST00000554927 UFL1O94874 794 aa17.27■□□□□ 0.36
TUBB3-207ENST00000554927 SF3B3Q15393 1217 aaKnown RBP17.27■□□□□ 0.36
TUBB3-207ENST00000554927 MOB2Q70IA6 237 aa17.27■□□□□ 0.36
TUBB3-207ENST00000554927 ANKIB1Q9P2G1 1089 aa17.27■□□□□ 0.36
TUBB3-207ENST00000554927 ATP5J2-PTCD1G3V325 749 aa17.26■□□□□ 0.35
TUBB3-207ENST00000554927 UBE2Q2LH0YL09 131 aa17.26■□□□□ 0.35
TUBB3-207ENST00000554927 RIPK4P57078 832 aa17.26■□□□□ 0.35
TUBB3-207ENST00000554927 ZNF280AP59817 542 aaPredicted RBP17.26■□□□□ 0.35
TUBB3-207ENST00000554927 RPS8P62241 208 aaKnown RBP17.26■□□□□ 0.35
TUBB3-207ENST00000554927 RSBN1LQ6PCB5 846 aaPredicted RBP17.26■□□□□ 0.35
TUBB3-207ENST00000554927 SCAF8Q9UPN6 1271 aaKnown RBP17.26■□□□□ 0.35
TUBB3-207ENST00000554927 GPR25O00155 361 aa17.25■□□□□ 0.35
TUBB3-207ENST00000554927 MKRN3Q13064 507 aaKnown RBP17.25■□□□□ 0.35
TUBB3-207ENST00000554927 FBXO46Q6PJ61 603 aaPredicted RBP17.25■□□□□ 0.35
TUBB3-207ENST00000554927 AGBL3Q8NEM8 1001 aa17.25■□□□□ 0.35
TUBB3-207ENST00000554927 PLBD2Q8NHP8 589 aa17.25■□□□□ 0.35
TUBB3-207ENST00000554927 MYOZ2Q9NPC6 264 aa17.25■□□□□ 0.35
TUBB3-207ENST00000554927 CHPF2Q9P2E5 772 aa17.25■□□□□ 0.35
TUBB3-207ENST00000554927 GGA1Q9UJY5 639 aa17.25■□□□□ 0.35
TUBB3-207ENST00000554927 IRS4O14654 1257 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-207ENST00000554927 USP17L8P0C7I0 530 aa17.24■□□□□ 0.35
TUBB3-207ENST00000554927 DDX10Q13206 875 aaKnown RBP17.24■□□□□ 0.35
TUBB3-207ENST00000554927 PRAMEF18Q5VWM3 479 aa17.24■□□□□ 0.35
TUBB3-207ENST00000554927 BABAM1Q9NWV8 329 aa17.24■□□□□ 0.35
TUBB3-207ENST00000554927 DDX60Q8IY21 1712 aaKnown RBP17.24■□□□□ 0.35
TUBB3-207ENST00000554927 PAPPA2Q9BXP8 1791 aa17.23■□□□□ 0.35
TUBB3-207ENST00000554927 ANKRD13DQ6ZTN6 518 aa17.23■□□□□ 0.35
TUBB3-207ENST00000554927 PITPNM2Q9BZ72 1349 aa17.22■□□□□ 0.35
TUBB3-207ENST00000554927 FKTNO75072 461 aa17.22■□□□□ 0.35
TUBB3-207ENST00000554927 NF2P35240 595 aa17.22■□□□□ 0.35
TUBB3-207ENST00000554927 LMOD3Q0VAK6 560 aa17.22■□□□□ 0.35
TUBB3-207ENST00000554927 KRT24Q2M2I5 525 aa17.22■□□□□ 0.35
TUBB3-207ENST00000554927 ISCA1Q9BUE6 129 aa17.22■□□□□ 0.35
TUBB3-207ENST00000554927 PODXL2Q9NZ53 605 aa17.22■□□□□ 0.35
TUBB3-207ENST00000554927 LAS1LQ9Y4W2 734 aaKnown RBP17.22■□□□□ 0.35
TUBB3-207ENST00000554927 TM4SF4P48230 202 aa17.21■□□□□ 0.35
TUBB3-207ENST00000554927 SREBF2Q12772 1141 aa17.21■□□□□ 0.35
TUBB3-207ENST00000554927 HDGFL1Q5TGJ6 251 aa17.21■□□□□ 0.35
TUBB3-207ENST00000554927 SEC31BQ9NQW1 1179 aa17.21■□□□□ 0.35
TUBB3-207ENST00000554927 COL4A1P02462 1669 aa17.2■□□□□ 0.34
TUBB3-207ENST00000554927 HABP4Q5JVS0 413 aaKnown RBP17.2■□□□□ 0.34
TUBB3-207ENST00000554927 SCN9AQ15858 1988 aa17.19■□□□□ 0.34
TUBB3-207ENST00000554927 USP17L3A6NCW0 530 aa17.19■□□□□ 0.34
TUBB3-207ENST00000554927 USP17L4A6NCW7 530 aa17.19■□□□□ 0.34
TUBB3-207ENST00000554927 NOM1Q5C9Z4 860 aaKnown RBP17.19■□□□□ 0.34
TUBB3-207ENST00000554927 USP17L1Q7RTZ2 530 aa17.19■□□□□ 0.34
TUBB3-207ENST00000554927 FBXW7Q969H0 707 aa17.19■□□□□ 0.34
TUBB3-207ENST00000554927 HSP90B1P14625 803 aaKnown RBP17.18■□□□□ 0.34
TUBB3-207ENST00000554927 PRKG1Q13976 671 aa17.18■□□□□ 0.34
TUBB3-207ENST00000554927 NBPF9Q3BBW0 867 aa17.18■□□□□ 0.34
TUBB3-207ENST00000554927 CCDC85AQ96PX6 553 aaPredicted RBP17.18■□□□□ 0.34
TUBB3-207ENST00000554927 GMLQ99445 158 aa17.18■□□□□ 0.34
TUBB3-207ENST00000554927 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.18■□□□□ 0.34
TUBB3-207ENST00000554927 DBF4Q9UBU7 674 aaPredicted RBP17.18■□□□□ 0.34
TUBB3-207ENST00000554927 ZNF609O15014 1411 aa17.17■□□□□ 0.34
TUBB3-207ENST00000554927 TMPOP42166 694 aaKnown RBP17.17■□□□□ 0.34
TUBB3-207ENST00000554927 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
TUBB3-207ENST00000554927 CCDC152Q4G0S7 254 aa17.17■□□□□ 0.34
TUBB3-207ENST00000554927 ARMC9Q7Z3E5 817 aa17.17■□□□□ 0.34
TUBB3-207ENST00000554927 OGFOD1Q8N543 542 aa17.17■□□□□ 0.34
TUBB3-207ENST00000554927 R3HDMLQ9H3Y0 253 aa17.17■□□□□ 0.34
TUBB3-207ENST00000554927 XDHP47989 1333 aa17.17■□□□□ 0.34
TUBB3-207ENST00000554927 RIC3Q7Z5B4 369 aa17.16■□□□□ 0.34
TUBB3-207ENST00000554927 PODNQ7Z5L7 613 aa17.16■□□□□ 0.34
TUBB3-207ENST00000554927 ZBTB38Q8NAP3 1195 aaPredicted RBP17.16■□□□□ 0.34
TUBB3-207ENST00000554927 HYPKQ9NX55 129 aa17.16■□□□□ 0.34
TUBB3-207ENST00000554927 TRIM17Q9Y577 477 aa17.16■□□□□ 0.34
TUBB3-207ENST00000554927 MYBBP1AQ9BQG0 1328 aaKnown RBP17.16■□□□□ 0.34
TUBB3-207ENST00000554927 CHL1O00533 1208 aa17.15■□□□□ 0.34
TUBB3-207ENST00000554927 ATP2B4P23634 1241 aa17.15■□□□□ 0.34
TUBB3-207ENST00000554927 PTPN12Q05209 780 aaKnown RBP17.15■□□□□ 0.34
TUBB3-207ENST00000554927 TRIM28Q13263 835 aaKnown RBP17.15■□□□□ 0.34
TUBB3-207ENST00000554927 WDR43Q15061 677 aaKnown RBP eCLIP17.15■□□□□ 0.34
TUBB3-207ENST00000554927 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
TUBB3-207ENST00000554927 MXD3Q9BW11 206 aa17.15■□□□□ 0.34
TUBB3-207ENST00000554927 POTEFA5A3E0 1075 aa17.14■□□□□ 0.33
TUBB3-207ENST00000554927 ALDH1A1P00352 501 aa17.14■□□□□ 0.33
TUBB3-207ENST00000554927 GOLGA2Q08379 1002 aa17.14■□□□□ 0.33
TUBB3-207ENST00000554927 CFHR5Q9BXR6 569 aa17.14■□□□□ 0.33
TUBB3-207ENST00000554927 WNT10BO00744 389 aa17.13■□□□□ 0.33
TUBB3-207ENST00000554927 SASH1O94885 1247 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms