RNA–Protein interactions for RNA: ENST00000554621.1

CFAP54-206, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 724 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-206ENST00000554621 TBC1D16Q8TBP0 767 aa18.89■□□□□ 0.61
CFAP54-206ENST00000554621 RNF186Q9NXI6 227 aa18.89■□□□□ 0.61
CFAP54-206ENST00000554621 GGA3Q9NZ52 723 aa18.89■□□□□ 0.61
CFAP54-206ENST00000554621 POLLQ9UGP5 575 aa18.89■□□□□ 0.61
CFAP54-206ENST00000554621 FAM155AB1AL88 458 aaPredicted RBP18.88■□□□□ 0.61
CFAP54-206ENST00000554621 CHL1O00533 1208 aa18.88■□□□□ 0.61
CFAP54-206ENST00000554621 FKBP1BP68106 108 aa18.88■□□□□ 0.61
CFAP54-206ENST00000554621 GOLGA2Q08379 1002 aa18.88■□□□□ 0.61
CFAP54-206ENST00000554621 RTL5Q5HYW3 569 aaPredicted RBP18.88■□□□□ 0.61
CFAP54-206ENST00000554621 RIC3Q7Z5B4 369 aa18.88■□□□□ 0.61
CFAP54-206ENST00000554621 ZNF428Q96B54 188 aa18.88■□□□□ 0.61
CFAP54-206ENST00000554621 ZIC5Q96T25 663 aa18.88■□□□□ 0.61
CFAP54-206ENST00000554621 ISCA1Q9BUE6 129 aa18.88■□□□□ 0.61
CFAP54-206ENST00000554621 GGA1Q9UJY5 639 aa18.88■□□□□ 0.61
CFAP54-206ENST00000554621 UFL1O94874 794 aa18.87■□□□□ 0.61
CFAP54-206ENST00000554621 SLC10A3P09131 477 aa18.87■□□□□ 0.61
CFAP54-206ENST00000554621 VIL1P09327 827 aaKnown RBP18.87■□□□□ 0.61
CFAP54-206ENST00000554621 WDR43Q15061 677 aaKnown RBP eCLIP18.87■□□□□ 0.61
CFAP54-206ENST00000554621 AGBL3Q8NEM8 1001 aa18.87■□□□□ 0.61
CFAP54-206ENST00000554621 TRIM28Q13263 835 aaKnown RBP18.86■□□□□ 0.61
CFAP54-206ENST00000554621 CCDC152Q4G0S7 254 aa18.86■□□□□ 0.61
CFAP54-206ENST00000554621 CTU1Q7Z7A3 348 aaKnown RBP18.86■□□□□ 0.61
CFAP54-206ENST00000554621 CDCA5Q96FF9 252 aa18.86■□□□□ 0.61
CFAP54-206ENST00000554621 CHMP4AQ9BY43 222 aa18.86■□□□□ 0.61
CFAP54-206ENST00000554621 HDAC9Q9UKV0 1011 aa18.86■□□□□ 0.61
CFAP54-206ENST00000554621 LRRC37AA6NMS7 1700 aa18.86■□□□□ 0.61
CFAP54-206ENST00000554621 DUOX1Q9NRD9 1551 aa18.85■□□□□ 0.61
CFAP54-206ENST00000554621 PKN2Q16513 984 aaKnown RBP18.85■□□□□ 0.61
CFAP54-206ENST00000554621 DLK2Q6UY11 383 aa18.85■□□□□ 0.61
CFAP54-206ENST00000554621 ZBTB38Q8NAP3 1195 aaPredicted RBP18.85■□□□□ 0.61
CFAP54-206ENST00000554621 PODXL2Q9NZ53 605 aa18.85■□□□□ 0.61
CFAP54-206ENST00000554621 DDX60Q8IY21 1712 aaKnown RBP18.85■□□□□ 0.61
CFAP54-206ENST00000554621 EGFRP00533 1210 aa18.84■□□□□ 0.61
CFAP54-206ENST00000554621 NF2P35240 595 aa18.84■□□□□ 0.61
CFAP54-206ENST00000554621 SOX10P56693 466 aa18.84■□□□□ 0.61
CFAP54-206ENST00000554621 RSBN1LQ6PCB5 846 aaPredicted RBP18.84■□□□□ 0.61
CFAP54-206ENST00000554621 RUNDC1Q96C34 613 aa18.84■□□□□ 0.61
CFAP54-206ENST00000554621 CSRNP1Q96S65 589 aa18.84■□□□□ 0.61
CFAP54-206ENST00000554621 KCNQ5Q9NR82 932 aa18.84■□□□□ 0.61
CFAP54-206ENST00000554621 RTL9Q8NET4 1388 aa18.83■□□□□ 0.61
CFAP54-206ENST00000554621 USP17L8P0C7I0 530 aa18.83■□□□□ 0.6
CFAP54-206ENST00000554621 SCARF1Q14162 830 aa18.83■□□□□ 0.6
CFAP54-206ENST00000554621 KRT24Q2M2I5 525 aa18.83■□□□□ 0.6
CFAP54-206ENST00000554621 ANGEL2Q5VTE6 544 aaKnown RBP18.83■□□□□ 0.6
CFAP54-206ENST00000554621 CCDC146Q8IYE0 955 aa18.83■□□□□ 0.6
CFAP54-206ENST00000554621 TTLL12Q14166 644 aaPredicted RBP18.82■□□□□ 0.6
CFAP54-206ENST00000554621 ANKRD18AQ8IVF6 992 aa18.82■□□□□ 0.6
CFAP54-206ENST00000554621 OGFOD1Q8N543 542 aa18.82■□□□□ 0.6
CFAP54-206ENST00000554621 AKAP11Q9UKA4 1901 aa18.82■□□□□ 0.6
CFAP54-206ENST00000554621 TAF1P21675 1872 aa18.82■□□□□ 0.6
CFAP54-206ENST00000554621 XDHP47989 1333 aa18.81■□□□□ 0.6
CFAP54-206ENST00000554621 PITPNM2Q9BZ72 1349 aa18.81■□□□□ 0.6
CFAP54-206ENST00000554621 DDX58O95786 925 aaKnown RBP18.81■□□□□ 0.6
CFAP54-206ENST00000554621 ZNF280AP59817 542 aaPredicted RBP18.81■□□□□ 0.6
CFAP54-206ENST00000554621 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
CFAP54-206ENST00000554621 DUSP27Q5VZP5 1158 aa18.81■□□□□ 0.6
CFAP54-206ENST00000554621 PODNQ7Z5L7 613 aa18.81■□□□□ 0.6
CFAP54-206ENST00000554621 MYOZ2Q9NPC6 264 aa18.81■□□□□ 0.6
CFAP54-206ENST00000554621 USP17L3A6NCW0 530 aa18.8■□□□□ 0.6
CFAP54-206ENST00000554621 USP17L4A6NCW7 530 aa18.8■□□□□ 0.6
CFAP54-206ENST00000554621 PDE8AO60658 829 aa18.8■□□□□ 0.6
CFAP54-206ENST00000554621 ATP2B4P23634 1241 aa18.8■□□□□ 0.6
CFAP54-206ENST00000554621 USP17L1Q7RTZ2 530 aa18.8■□□□□ 0.6
CFAP54-206ENST00000554621 RASAL3Q86YV0 1011 aa18.8■□□□□ 0.6
CFAP54-206ENST00000554621 CCDC191Q8NCU4 936 aa18.8■□□□□ 0.6
CFAP54-206ENST00000554621 CDC5LQ99459 802 aaKnown RBP18.8■□□□□ 0.6
CFAP54-206ENST00000554621 SEC31BQ9NQW1 1179 aa18.79■□□□□ 0.6
CFAP54-206ENST00000554621 CWC25Q9NXE8 425 aaPredicted RBP18.79■□□□□ 0.6
CFAP54-206ENST00000554621 MYD88Q99836 296 aa18.78■□□□□ 0.6
CFAP54-206ENST00000554621 POLR2AP24928 1970 aaKnown RBP18.78■□□□□ 0.6
CFAP54-206ENST00000554621 MYBBP1AQ9BQG0 1328 aaKnown RBP18.77■□□□□ 0.6
CFAP54-206ENST00000554621 PCCAP05165 728 aaPredicted RBP18.77■□□□□ 0.6
CFAP54-206ENST00000554621 MMP14P50281 582 aa18.77■□□□□ 0.6
CFAP54-206ENST00000554621 SREBF2Q12772 1141 aa18.77■□□□□ 0.6
CFAP54-206ENST00000554621 PRPF38BQ5VTL8 546 aaKnown RBP18.77■□□□□ 0.6
CFAP54-206ENST00000554621 FBXW7Q969H0 707 aa18.77■□□□□ 0.6
CFAP54-206ENST00000554621 TRIM35Q9UPQ4 493 aa18.77■□□□□ 0.6
CFAP54-206ENST00000554621 MYO3BQ8WXR4 1341 aa18.76■□□□□ 0.59
CFAP54-206ENST00000554621 ZNF609O15014 1411 aa18.76■□□□□ 0.59
CFAP54-206ENST00000554621 HPS5Q9UPZ3 1129 aa18.76■□□□□ 0.59
CFAP54-206ENST00000554621 ASTN2O75129 1339 aaPredicted RBP18.75■□□□□ 0.59
CFAP54-206ENST00000554621 ARMC9Q7Z3E5 817 aa18.75■□□□□ 0.59
CFAP54-206ENST00000554621 CCDC85AQ96PX6 553 aaPredicted RBP18.75■□□□□ 0.59
CFAP54-206ENST00000554621 PAPPA2Q9BXP8 1791 aa18.75■□□□□ 0.59
CFAP54-206ENST00000554621 UBE2Q2LH0YL09 131 aa18.74■□□□□ 0.59
CFAP54-206ENST00000554621 GNAI1P63096 354 aa18.74■□□□□ 0.59
CFAP54-206ENST00000554621 NEXNQ0ZGT2 675 aa18.74■□□□□ 0.59
CFAP54-206ENST00000554621 MBIPQ9NS73 344 aa18.74■□□□□ 0.59
CFAP54-206ENST00000554621 TBC1D8O95759 1140 aa18.73■□□□□ 0.59
CFAP54-206ENST00000554621 CCDC30Q5VVM6 783 aa18.73■□□□□ 0.59
CFAP54-206ENST00000554621 ZNF296Q8WUU4 475 aaPredicted RBP18.73■□□□□ 0.59
CFAP54-206ENST00000554621 NOM1Q5C9Z4 860 aaKnown RBP18.72■□□□□ 0.59
CFAP54-206ENST00000554621 GMLQ99445 158 aa18.72■□□□□ 0.59
CFAP54-206ENST00000554621 METTL22Q9BUU2 404 aaPredicted RBP18.72■□□□□ 0.59
CFAP54-206ENST00000554621 PHAXQ9H814 394 aaKnown RBP18.72■□□□□ 0.59
CFAP54-206ENST00000554621 IFT57Q9NWB7 429 aa18.72■□□□□ 0.59
CFAP54-206ENST00000554621 ELL2O00472 640 aaPredicted RBP18.71■□□□□ 0.59
CFAP54-206ENST00000554621 ALDH1A1P00352 501 aa18.71■□□□□ 0.59
CFAP54-206ENST00000554621 TM4SF4P48230 202 aa18.71■□□□□ 0.59
CFAP54-206ENST00000554621 APOBEC3FQ8IUX4 373 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms