RNA–Protein interactions for RNA: ENST00000554178.1

PTPN21-204, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 822 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-204ENST00000554178 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
PTPN21-204ENST00000554178 RBM26Q5T8P6 1007 aaKnown RBP12.78□□□□□ -0.36
PTPN21-204ENST00000554178 DDX46Q7L014 1031 aaKnown RBP12.78□□□□□ -0.36
PTPN21-204ENST00000554178 NLRP10Q86W26 655 aa12.78□□□□□ -0.36
PTPN21-204ENST00000554178 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
PTPN21-204ENST00000554178 XAGE3Q8WTP9 111 aa12.78□□□□□ -0.36
PTPN21-204ENST00000554178 MS4A3Q96HJ5 214 aa12.78□□□□□ -0.36
PTPN21-204ENST00000554178 TRMT112Q9UI30 125 aaKnown RBP12.78□□□□□ -0.36
PTPN21-204ENST00000554178 ERBB4Q15303 1308 aa12.78□□□□□ -0.36
PTPN21-204ENST00000554178 CDHR2Q9BYE9 1310 aa12.78□□□□□ -0.36
PTPN21-204ENST00000554178 CA12O43570 354 aa12.77□□□□□ -0.37
PTPN21-204ENST00000554178 RGS19P49795 217 aa12.77□□□□□ -0.37
PTPN21-204ENST00000554178 TNIP1Q15025 636 aa12.77□□□□□ -0.37
PTPN21-204ENST00000554178 CDC37L1Q7L3B6 337 aa12.77□□□□□ -0.37
PTPN21-204ENST00000554178 COPS6Q7L5N1 327 aa12.77□□□□□ -0.37
PTPN21-204ENST00000554178 SP8Q8IXZ3 490 aa12.77□□□□□ -0.37
PTPN21-204ENST00000554178 ASTN2O75129 1339 aaPredicted RBP12.77□□□□□ -0.37
PTPN21-204ENST00000554178 PAPPA2Q9BXP8 1791 aa12.76□□□□□ -0.37
PTPN21-204ENST00000554178 NOGQ13253 232 aa12.76□□□□□ -0.37
PTPN21-204ENST00000554178 DOK7Q18PE1 504 aa12.76□□□□□ -0.37
PTPN21-204ENST00000554178 KRT26Q7Z3Y9 468 aa12.76□□□□□ -0.37
PTPN21-204ENST00000554178 RASEFQ8IZ41 740 aa12.76□□□□□ -0.37
PTPN21-204ENST00000554178 KCNQ5Q9NR82 932 aa12.76□□□□□ -0.37
PTPN21-204ENST00000554178 SH3TC1Q8TE82 1336 aa12.76□□□□□ -0.37
PTPN21-204ENST00000554178 RTL9Q8NET4 1388 aa12.76□□□□□ -0.37
PTPN21-204ENST00000554178 FAM155AB1AL88 458 aaPredicted RBP12.75□□□□□ -0.37
PTPN21-204ENST00000554178 H7C1D1 291 aa12.75□□□□□ -0.37
PTPN21-204ENST00000554178 SLC10A5Q5PT55 438 aa12.75□□□□□ -0.37
PTPN21-204ENST00000554178 CELF1Q92879 486 aaKnown RBP12.75□□□□□ -0.37
PTPN21-204ENST00000554178 HHIPL1Q96JK4 782 aa12.75□□□□□ -0.37
PTPN21-204ENST00000554178 GBA2Q9HCG7 927 aaPredicted RBP12.75□□□□□ -0.37
PTPN21-204ENST00000554178 GGA3Q9NZ52 723 aa12.75□□□□□ -0.37
PTPN21-204ENST00000554178 PGAP2Q9UHJ9 254 aa12.75□□□□□ -0.37
PTPN21-204ENST00000554178 C6orf229H3BNL8 230 aa12.74□□□□□ -0.37
PTPN21-204ENST00000554178 ECE2O60344 883 aa12.74□□□□□ -0.37
PTPN21-204ENST00000554178 BBOX1O75936 387 aa12.74□□□□□ -0.37
PTPN21-204ENST00000554178 GPSM2P81274 684 aa12.74□□□□□ -0.37
PTPN21-204ENST00000554178 KIF23Q02241 960 aaPredicted RBP12.74□□□□□ -0.37
PTPN21-204ENST00000554178 RGMBQ6NW40 437 aa12.74□□□□□ -0.37
PTPN21-204ENST00000554178 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
PTPN21-204ENST00000554178 VPS33BQ9H267 617 aa12.74□□□□□ -0.37
PTPN21-204ENST00000554178 CHPF2Q9P2E5 772 aa12.74□□□□□ -0.37
PTPN21-204ENST00000554178 NSFL1CQ9UNZ2 370 aaKnown RBP12.74□□□□□ -0.37
PTPN21-204ENST00000554178 SCAF8Q9UPN6 1271 aaKnown RBP12.74□□□□□ -0.37
PTPN21-204ENST00000554178 ATP5J2-PTCD1G3V325 749 aa12.73□□□□□ -0.37
PTPN21-204ENST00000554178 TRPA1O75762 1119 aa12.73□□□□□ -0.37
PTPN21-204ENST00000554178 ZNF157P51786 506 aaPredicted RBP12.73□□□□□ -0.37
PTPN21-204ENST00000554178 RIPK4P57078 832 aa12.73□□□□□ -0.37
PTPN21-204ENST00000554178 WASHC4Q2M389 1173 aa12.73□□□□□ -0.37
PTPN21-204ENST00000554178 KIF4BQ2VIQ3 1234 aa12.73□□□□□ -0.37
PTPN21-204ENST00000554178 CCDC146Q8IYE0 955 aa12.73□□□□□ -0.37
PTPN21-204ENST00000554178 ZC3H15Q8WU90 426 aaKnown RBP12.73□□□□□ -0.37
PTPN21-204ENST00000554178 FAM89AQ96GI7 184 aa12.73□□□□□ -0.37
PTPN21-204ENST00000554178 LAS1LQ9Y4W2 734 aaKnown RBP12.73□□□□□ -0.37
PTPN21-204ENST00000554178 A0A1B0GUL6 1792 aa12.73□□□□□ -0.37
PTPN21-204ENST00000554178 ECM29Q5VYK3 1845 aa12.72□□□□□ -0.37
PTPN21-204ENST00000554178 TCIRG1Q13488 830 aa12.72□□□□□ -0.37
PTPN21-204ENST00000554178 NEUROD2Q15784 382 aa12.72□□□□□ -0.37
PTPN21-204ENST00000554178 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
PTPN21-204ENST00000554178 DCPSQ96C86 337 aaKnown RBP12.72□□□□□ -0.37
PTPN21-204ENST00000554178 POLLQ9UGP5 575 aa12.72□□□□□ -0.37
PTPN21-204ENST00000554178 C2orf69Q8N8R5 385 aa12.71□□□□□ -0.37
PTPN21-204ENST00000554178 CDCA5Q96FF9 252 aa12.71□□□□□ -0.37
PTPN21-204ENST00000554178 RNF186Q9NXI6 227 aa12.71□□□□□ -0.37
PTPN21-204ENST00000554178 SLC10A3P09131 477 aa12.7□□□□□ -0.38
PTPN21-204ENST00000554178 MOB2Q70IA6 237 aa12.7□□□□□ -0.38
PTPN21-204ENST00000554178 CCDC85AQ96PX6 553 aaPredicted RBP12.7□□□□□ -0.38
PTPN21-204ENST00000554178 POTEB2H3BUK9 544 aa12.69□□□□□ -0.38
PTPN21-204ENST00000554178 UFL1O94874 794 aa12.69□□□□□ -0.38
PTPN21-204ENST00000554178 HDGFL1Q5TGJ6 251 aa12.69□□□□□ -0.38
PTPN21-204ENST00000554178 ANGEL2Q5VTE6 544 aaKnown RBP12.69□□□□□ -0.38
PTPN21-204ENST00000554178 RASAL3Q86YV0 1011 aa12.69□□□□□ -0.38
PTPN21-204ENST00000554178 SULF1Q8IWU6 871 aa12.69□□□□□ -0.38
PTPN21-204ENST00000554178 OTOFQ9HC10 1997 aa12.69□□□□□ -0.38
PTPN21-204ENST00000554178 TMPOP42166 694 aaKnown RBP12.68□□□□□ -0.38
PTPN21-204ENST00000554178 MKRN3Q13064 507 aaKnown RBP12.68□□□□□ -0.38
PTPN21-204ENST00000554178 TBC1D16Q8TBP0 767 aa12.68□□□□□ -0.38
PTPN21-204ENST00000554178 DPF2Q92785 391 aa12.68□□□□□ -0.38
PTPN21-204ENST00000554178 JARID2Q92833 1246 aaPredicted RBP12.68□□□□□ -0.38
PTPN21-204ENST00000554178 KIF12Q96FN5 646 aa12.68□□□□□ -0.38
PTPN21-204ENST00000554178 SEC31BQ9NQW1 1179 aa12.68□□□□□ -0.38
PTPN21-204ENST00000554178 SAGE1Q9NXZ1 904 aa12.68□□□□□ -0.38
PTPN21-204ENST00000554178 LAMB1P07942 1786 aa12.67□□□□□ -0.38
PTPN21-204ENST00000554178 G3V3G9 751 aa12.67□□□□□ -0.38
PTPN21-204ENST00000554178 IRS4O14654 1257 aaPredicted RBP12.67□□□□□ -0.38
PTPN21-204ENST00000554178 DCAF8Q5TAQ9 597 aa12.67□□□□□ -0.38
PTPN21-204ENST00000554178 PRAMEF18Q5VWM3 479 aa12.67□□□□□ -0.38
PTPN21-204ENST00000554178 TMC4Q7Z404 712 aa12.67□□□□□ -0.38
PTPN21-204ENST00000554178 CCDC102AQ96A19 550 aa12.67□□□□□ -0.38
PTPN21-204ENST00000554178 CSRNP1Q96S65 589 aa12.67□□□□□ -0.38
PTPN21-204ENST00000554178 EYA3Q99504 573 aa12.67□□□□□ -0.38
PTPN21-204ENST00000554178 RPS12P25398 132 aaKnown RBP12.66□□□□□ -0.38
PTPN21-204ENST00000554178 CTU1Q7Z7A3 348 aaKnown RBP12.66□□□□□ -0.38
PTPN21-204ENST00000554178 PLBD2Q8NHP8 589 aa12.66□□□□□ -0.38
PTPN21-204ENST00000554178 ISCA1Q9BUE6 129 aa12.66□□□□□ -0.38
PTPN21-204ENST00000554178 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.66□□□□□ -0.38
PTPN21-204ENST00000554178 ANKIB1Q9P2G1 1089 aa12.66□□□□□ -0.38
PTPN21-204ENST00000554178 TRPC6Q9Y210 931 aa12.66□□□□□ -0.38
PTPN21-204ENST00000554178 RBBP6Q7Z6E9 1792 aaKnown RBP12.66□□□□□ -0.38
PTPN21-204ENST00000554178 LMOD3Q0VAK6 560 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms