RNA–Protein interactions for RNA: ENST00000554014.6

NUMB-208, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 1,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-208ENST00000554014 GRAPLQ8TC17 118 aaPredicted RBP11.6□□□□□ -0.55
NUMB-208ENST00000554014 ZNF594Q96JF6 807 aaPredicted RBP11.6□□□□□ -0.55
NUMB-208ENST00000554014 CRAMP1Q96RY5 1269 aa11.6□□□□□ -0.55
NUMB-208ENST00000554014 CHMP4BQ9H444 224 aaKnown RBP11.6□□□□□ -0.55
NUMB-208ENST00000554014 WWC3Q9ULE0 1092 aa11.6□□□□□ -0.55
NUMB-208ENST00000554014 PTPN12Q05209 780 aaKnown RBP11.59□□□□□ -0.55
NUMB-208ENST00000554014 PRPF40BQ6NWY9 871 aaKnown RBP11.59□□□□□ -0.55
NUMB-208ENST00000554014 ZNF622Q969S3 477 aaKnown RBP eCLIP11.59□□□□□ -0.55
NUMB-208ENST00000554014 RBM17Q96I25 401 aaKnown RBP11.59□□□□□ -0.55
NUMB-208ENST00000554014 HDAC5Q9UQL6 1122 aa11.59□□□□□ -0.55
NUMB-208ENST00000554014 CCDC88AQ3V6T2 1871 aa11.59□□□□□ -0.55
NUMB-208ENST00000554014 ANKRD18BA2A2Z9 1011 aa11.58□□□□□ -0.56
NUMB-208ENST00000554014 ATP8B2P98198 1209 aa11.58□□□□□ -0.56
NUMB-208ENST00000554014 IFIT5Q13325 482 aaKnown RBP11.58□□□□□ -0.56
NUMB-208ENST00000554014 OLFM4Q6UX06 510 aa11.58□□□□□ -0.56
NUMB-208ENST00000554014 SSH3Q8TE77 659 aa11.58□□□□□ -0.56
NUMB-208ENST00000554014 PA2G4Q9UQ80 394 aaKnown RBP11.58□□□□□ -0.56
NUMB-208ENST00000554014 PPEF1O14829 653 aaPredicted RBP11.57□□□□□ -0.56
NUMB-208ENST00000554014 CCDC57Q2TAC2 916 aa11.57□□□□□ -0.56
NUMB-208ENST00000554014 SBF1O95248 1867 aa11.57□□□□□ -0.56
NUMB-208ENST00000554014 AAMPQ13685 434 aa11.57□□□□□ -0.56
NUMB-208ENST00000554014 ANKRD18AQ8IVF6 992 aa11.57□□□□□ -0.56
NUMB-208ENST00000554014 RPAP2Q8IXW5 612 aaPredicted RBP11.57□□□□□ -0.56
NUMB-208ENST00000554014 TTLL6Q8N841 843 aa11.57□□□□□ -0.56
NUMB-208ENST00000554014 C7orf43Q8WVR3 580 aa11.57□□□□□ -0.56
NUMB-208ENST00000554014 CNKSR1Q969H4 720 aa11.57□□□□□ -0.56
NUMB-208ENST00000554014 CDC5LQ99459 802 aaKnown RBP11.57□□□□□ -0.56
NUMB-208ENST00000554014 PUS3Q9BZE2 481 aaKnown RBP11.57□□□□□ -0.56
NUMB-208ENST00000554014 PIM2Q9P1W9 311 aa11.57□□□□□ -0.56
NUMB-208ENST00000554014 RPS8P62241 208 aaKnown RBP11.56□□□□□ -0.56
NUMB-208ENST00000554014 LRRC24Q50LG9 513 aa11.56□□□□□ -0.56
NUMB-208ENST00000554014 SIL1Q9H173 461 aa11.56□□□□□ -0.56
NUMB-208ENST00000554014 COPRSQ9NQ92 184 aa11.56□□□□□ -0.56
NUMB-208ENST00000554014 CREBZFQ9NS37 354 aa11.56□□□□□ -0.56
NUMB-208ENST00000554014 FARP1Q9Y4F1 1045 aaPredicted RBP11.56□□□□□ -0.56
NUMB-208ENST00000554014 NEFLP07196 543 aa11.55□□□□□ -0.56
NUMB-208ENST00000554014 ALDH1B1P30837 517 aa11.55□□□□□ -0.56
NUMB-208ENST00000554014 DALRD3Q5D0E6 543 aaKnown RBP11.55□□□□□ -0.56
NUMB-208ENST00000554014 ATG9AQ7Z3C6 839 aa11.55□□□□□ -0.56
NUMB-208ENST00000554014 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
NUMB-208ENST00000554014 ATP6V0A2Q9Y487 856 aa11.55□□□□□ -0.56
NUMB-208ENST00000554014 ZNF646O15015 1829 aaPredicted RBP11.55□□□□□ -0.56
NUMB-208ENST00000554014 DICER1Q9UPY3 1922 aaKnown RBP11.55□□□□□ -0.56
NUMB-208ENST00000554014 BBOX1O75936 387 aa11.55□□□□□ -0.56
NUMB-208ENST00000554014 YBX3P16989 372 aaKnown RBP eCLIP11.55□□□□□ -0.56
NUMB-208ENST00000554014 IGHMBP2P38935 993 aaKnown RBP11.55□□□□□ -0.56
NUMB-208ENST00000554014 TAF7LQ5H9L4 462 aa11.55□□□□□ -0.56
NUMB-208ENST00000554014 BSDC1Q9NW68 430 aaPredicted RBP11.55□□□□□ -0.56
NUMB-208ENST00000554014 RIPOR2Q9Y4F9 1068 aa11.55□□□□□ -0.56
NUMB-208ENST00000554014 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.55□□□□□ -0.56
NUMB-208ENST00000554014 MYH13Q9UKX3 1938 aa11.54□□□□□ -0.56
NUMB-208ENST00000554014 TIAM2Q8IVF5 1701 aa11.54□□□□□ -0.56
NUMB-208ENST00000554014 C21orf2O43822 256 aa11.54□□□□□ -0.56
NUMB-208ENST00000554014 LDHAL6AQ6ZMR3 332 aa11.54□□□□□ -0.56
NUMB-208ENST00000554014 VGLL2Q8N8G2 317 aa11.54□□□□□ -0.56
NUMB-208ENST00000554014 MINPP1Q9UNW1 487 aa11.54□□□□□ -0.56
NUMB-208ENST00000554014 BCS1LQ9Y276 419 aa11.54□□□□□ -0.56
NUMB-208ENST00000554014 EXOC6BQ9Y2D4 811 aa11.54□□□□□ -0.56
NUMB-208ENST00000554014 NOP58Q9Y2X3 529 aaKnown RBP11.54□□□□□ -0.56
NUMB-208ENST00000554014 COL4A5P29400 1685 aa11.53□□□□□ -0.56
NUMB-208ENST00000554014 WTIPA6NIX2 430 aaPredicted RBP11.53□□□□□ -0.56
NUMB-208ENST00000554014 EYA2O00167 538 aa11.53□□□□□ -0.56
NUMB-208ENST00000554014 CIAO1O76071 339 aa11.53□□□□□ -0.56
NUMB-208ENST00000554014 IGHDP01880 384 aa11.53□□□□□ -0.56
NUMB-208ENST00000554014 HDAC1Q13547 482 aaPredicted RBP11.53□□□□□ -0.56
NUMB-208ENST00000554014 TMC4Q7Z404 712 aa11.53□□□□□ -0.56
NUMB-208ENST00000554014 SP8Q8IXZ3 490 aa11.53□□□□□ -0.56
NUMB-208ENST00000554014 MPHOSPH8Q99549 860 aa11.53□□□□□ -0.56
NUMB-208ENST00000554014 ZNF609O15014 1411 aa11.53□□□□□ -0.56
NUMB-208ENST00000554014 HMMRO75330 724 aa11.52□□□□□ -0.56
NUMB-208ENST00000554014 SASH1O94885 1247 aa11.52□□□□□ -0.56
NUMB-208ENST00000554014 GPSM2P81274 684 aa11.52□□□□□ -0.56
NUMB-208ENST00000554014 CHRNDQ07001 517 aa11.52□□□□□ -0.56
NUMB-208ENST00000554014 HELBQ8NG08 1087 aaPredicted RBP11.52□□□□□ -0.56
NUMB-208ENST00000554014 CNNM1Q9NRU3 951 aa11.52□□□□□ -0.56
NUMB-208ENST00000554014 PSME4Q14997 1843 aa11.52□□□□□ -0.57
NUMB-208ENST00000554014 CHD4Q14839 1912 aa11.52□□□□□ -0.57
NUMB-208ENST00000554014 SNAP23O00161 211 aa11.52□□□□□ -0.57
NUMB-208ENST00000554014 SURF6O75683 361 aaKnown RBP11.52□□□□□ -0.57
NUMB-208ENST00000554014 SCN9AQ15858 1988 aa11.51□□□□□ -0.57
NUMB-208ENST00000554014 NFKBIEO00221 500 aa11.51□□□□□ -0.57
NUMB-208ENST00000554014 TAF5LO75529 589 aa11.51□□□□□ -0.57
NUMB-208ENST00000554014 CCDC93Q567U6 631 aa11.51□□□□□ -0.57
NUMB-208ENST00000554014 DCTPP1Q9H773 170 aa11.51□□□□□ -0.57
NUMB-208ENST00000554014 MROH5Q6ZUA9 1318 aa11.51□□□□□ -0.57
NUMB-208ENST00000554014 IL15P40933 162 aaPredicted RBP11.5□□□□□ -0.57
NUMB-208ENST00000554014 METTL24Q5JXM2 366 aa11.5□□□□□ -0.57
NUMB-208ENST00000554014 GPR101Q96P66 508 aaPredicted RBP11.5□□□□□ -0.57
NUMB-208ENST00000554014 PODXL2Q9NZ53 605 aa11.5□□□□□ -0.57
NUMB-208ENST00000554014 XDHP47989 1333 aa11.5□□□□□ -0.57
NUMB-208ENST00000554014 IRS2Q9Y4H2 1338 aa11.5□□□□□ -0.57
NUMB-208ENST00000554014 KDM2BQ8NHM5 1336 aa11.49□□□□□ -0.57
NUMB-208ENST00000554014 KLRK1P26718 216 aa11.49□□□□□ -0.57
NUMB-208ENST00000554014 PRELPP51888 382 aa11.49□□□□□ -0.57
NUMB-208ENST00000554014 RASSF7Q02833 373 aa11.49□□□□□ -0.57
NUMB-208ENST00000554014 TFCP2Q12800 502 aa11.49□□□□□ -0.57
NUMB-208ENST00000554014 PELP1Q8IZL8 1130 aaKnown RBP11.49□□□□□ -0.57
NUMB-208ENST00000554014 POLLQ9UGP5 575 aa11.49□□□□□ -0.57
NUMB-208ENST00000554014 APBB1O00213 710 aa11.49□□□□□ -0.57
NUMB-208ENST00000554014 UFL1O94874 794 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms