RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 TRIM35Q9UPQ4 493 aa23.04■■□□□ 1.28
SYNE2-211ENST00000553801 G3V3G9 751 aa23.03■■□□□ 1.28
SYNE2-211ENST00000553801 WDR43Q15061 677 aaKnown RBP eCLIP23.03■■□□□ 1.28
SYNE2-211ENST00000553801 RTL5Q5HYW3 569 aaPredicted RBP23.03■■□□□ 1.28
SYNE2-211ENST00000553801 DCAF8Q5TAQ9 597 aa23.03■■□□□ 1.28
SYNE2-211ENST00000553801 TBC1D16Q8TBP0 767 aa23.03■■□□□ 1.28
SYNE2-211ENST00000553801 ZIC5Q96T25 663 aa23.03■■□□□ 1.28
SYNE2-211ENST00000553801 SLC34A2O95436 690 aa23.02■■□□□ 1.28
SYNE2-211ENST00000553801 MYBBP1AQ9BQG0 1328 aaKnown RBP23.02■■□□□ 1.28
SYNE2-211ENST00000553801 VIL1P09327 827 aaKnown RBP23.01■■□□□ 1.27
SYNE2-211ENST00000553801 KIF4BQ2VIQ3 1234 aa23.01■■□□□ 1.27
SYNE2-211ENST00000553801 DUSP27Q5VZP5 1158 aa23.01■■□□□ 1.27
SYNE2-211ENST00000553801 DLK2Q6UY11 383 aa23.01■■□□□ 1.27
SYNE2-211ENST00000553801 SULF1Q8IWU6 871 aa23.01■■□□□ 1.27
SYNE2-211ENST00000553801 KCNQ5Q9NR82 932 aa23.01■■□□□ 1.27
SYNE2-211ENST00000553801 SAGE1Q9NXZ1 904 aa23.01■■□□□ 1.27
SYNE2-211ENST00000553801 PODXL2Q9NZ53 605 aa23.01■■□□□ 1.27
SYNE2-211ENST00000553801 RTL9Q8NET4 1388 aa23.01■■□□□ 1.27
SYNE2-211ENST00000553801 FAM155AB1AL88 458 aaPredicted RBP23■■□□□ 1.27
SYNE2-211ENST00000553801 ADM5C9JUS6 153 aa23■■□□□ 1.27
SYNE2-211ENST00000553801 EGFRP00533 1210 aa23■■□□□ 1.27
SYNE2-211ENST00000553801 ZNF157P51786 506 aaPredicted RBP23■■□□□ 1.27
SYNE2-211ENST00000553801 RIC3Q7Z5B4 369 aa23■■□□□ 1.27
SYNE2-211ENST00000553801 ZBTB38Q8NAP3 1195 aaPredicted RBP23■■□□□ 1.27
SYNE2-211ENST00000553801 GOLGA2Q08379 1002 aa22.99■■□□□ 1.27
SYNE2-211ENST00000553801 ANKIB1Q9P2G1 1089 aa22.99■■□□□ 1.27
SYNE2-211ENST00000553801 KIF23Q02241 960 aaPredicted RBP22.98■■□□□ 1.27
SYNE2-211ENST00000553801 GGA1Q9UJY5 639 aa22.98■■□□□ 1.27
SYNE2-211ENST00000553801 UFL1O94874 794 aa22.97■■□□□ 1.27
SYNE2-211ENST00000553801 GGA3Q9NZ52 723 aa22.97■■□□□ 1.27
SYNE2-211ENST00000553801 CCDC152Q4G0S7 254 aa22.96■■□□□ 1.27
SYNE2-211ENST00000553801 AGBL3Q8NEM8 1001 aa22.96■■□□□ 1.27
SYNE2-211ENST00000553801 SEC31BQ9NQW1 1179 aa22.96■■□□□ 1.27
SYNE2-211ENST00000553801 REM2Q8IYK8 340 aaPredicted RBP22.95■■□□□ 1.26
SYNE2-211ENST00000553801 CCDC191Q8NCU4 936 aa22.95■■□□□ 1.26
SYNE2-211ENST00000553801 MBIPQ9NS73 344 aa22.95■■□□□ 1.26
SYNE2-211ENST00000553801 ADAMTS8Q9UP79 889 aa22.95■■□□□ 1.26
SYNE2-211ENST00000553801 AKAP11Q9UKA4 1901 aa22.94■■□□□ 1.26
SYNE2-211ENST00000553801 PDE8AO60658 829 aa22.94■■□□□ 1.26
SYNE2-211ENST00000553801 TRPA1O75762 1119 aa22.94■■□□□ 1.26
SYNE2-211ENST00000553801 SLC10A3P09131 477 aa22.94■■□□□ 1.26
SYNE2-211ENST00000553801 RSBN1LQ6PCB5 846 aaPredicted RBP22.94■■□□□ 1.26
SYNE2-211ENST00000553801 RNF186Q9NXI6 227 aa22.94■■□□□ 1.26
SYNE2-211ENST00000553801 SCN9AQ15858 1988 aa22.94■■□□□ 1.26
SYNE2-211ENST00000553801 COL4A1P02462 1669 aa22.93■■□□□ 1.26
SYNE2-211ENST00000553801 PCCAP05165 728 aaPredicted RBP22.93■■□□□ 1.26
SYNE2-211ENST00000553801 ZNF280AP59817 542 aaPredicted RBP22.93■■□□□ 1.26
SYNE2-211ENST00000553801 CDCA5Q96FF9 252 aa22.93■■□□□ 1.26
SYNE2-211ENST00000553801 MYD88Q99836 296 aa22.93■■□□□ 1.26
SYNE2-211ENST00000553801 CHMP4AQ9BY43 222 aa22.93■■□□□ 1.26
SYNE2-211ENST00000553801 FKBP1BP68106 108 aa22.92■■□□□ 1.26
SYNE2-211ENST00000553801 CALD1Q05682 793 aaKnown RBP22.92■■□□□ 1.26
SYNE2-211ENST00000553801 SCARF1Q14162 830 aa22.92■■□□□ 1.26
SYNE2-211ENST00000553801 PHAXQ9H814 394 aaKnown RBP22.92■■□□□ 1.26
SYNE2-211ENST00000553801 ZNF609O15014 1411 aa22.91■■□□□ 1.26
SYNE2-211ENST00000553801 XDHP47989 1333 aa22.91■■□□□ 1.26
SYNE2-211ENST00000553801 ANGEL2Q5VTE6 544 aaKnown RBP22.91■■□□□ 1.26
SYNE2-211ENST00000553801 ANKRD18AQ8IVF6 992 aa22.91■■□□□ 1.26
SYNE2-211ENST00000553801 CSRNP1Q96S65 589 aa22.91■■□□□ 1.26
SYNE2-211ENST00000553801 CWC25Q9NXE8 425 aaPredicted RBP22.91■■□□□ 1.26
SYNE2-211ENST00000553801 ASTN2O75129 1339 aaPredicted RBP22.9■■□□□ 1.26
SYNE2-211ENST00000553801 DDX58O95786 925 aaKnown RBP22.9■■□□□ 1.26
SYNE2-211ENST00000553801 USP17L8P0C7I0 530 aa22.9■■□□□ 1.26
SYNE2-211ENST00000553801 ZNF853P0CG23 659 aa22.9■■□□□ 1.26
SYNE2-211ENST00000553801 ATP2B4P23634 1241 aa22.9■■□□□ 1.26
SYNE2-211ENST00000553801 GNAI1P63096 354 aa22.9■■□□□ 1.26
SYNE2-211ENST00000553801 DDX10Q13206 875 aaKnown RBP22.9■■□□□ 1.26
SYNE2-211ENST00000553801 PODNQ7Z5L7 613 aa22.9■■□□□ 1.26
SYNE2-211ENST00000553801 IFT57Q9NWB7 429 aa22.9■■□□□ 1.26
SYNE2-211ENST00000553801 MYOZ2Q9NPC6 264 aa22.89■■□□□ 1.25
SYNE2-211ENST00000553801 PITPNM2Q9BZ72 1349 aa22.88■■□□□ 1.25
SYNE2-211ENST00000553801 USP17L3A6NCW0 530 aa22.88■■□□□ 1.25
SYNE2-211ENST00000553801 USP17L4A6NCW7 530 aa22.88■■□□□ 1.25
SYNE2-211ENST00000553801 ELL2O00472 640 aaPredicted RBP22.88■■□□□ 1.25
SYNE2-211ENST00000553801 USP17L1Q7RTZ2 530 aa22.88■■□□□ 1.25
SYNE2-211ENST00000553801 METTL22Q9BUU2 404 aaPredicted RBP22.88■■□□□ 1.25
SYNE2-211ENST00000553801 RASAL3Q86YV0 1011 aa22.87■■□□□ 1.25
SYNE2-211ENST00000553801 CCDC85AQ96PX6 553 aaPredicted RBP22.87■■□□□ 1.25
SYNE2-211ENST00000553801 GMLQ99445 158 aa22.87■■□□□ 1.25
SYNE2-211ENST00000553801 CDC5LQ99459 802 aaKnown RBP22.87■■□□□ 1.25
SYNE2-211ENST00000553801 CTU1Q7Z7A3 348 aaKnown RBP22.86■■□□□ 1.25
SYNE2-211ENST00000553801 JARID2Q92833 1246 aaPredicted RBP22.86■■□□□ 1.25
SYNE2-211ENST00000553801 PSME4Q14997 1843 aa22.86■■□□□ 1.25
SYNE2-211ENST00000553801 PDE4DIPQ5VU43 2346 aa22.86■■□□□ 1.25
SYNE2-211ENST00000553801 CCDC30Q5VVM6 783 aa22.85■■□□□ 1.25
SYNE2-211ENST00000553801 PAPPA2Q9BXP8 1791 aa22.84■■□□□ 1.25
SYNE2-211ENST00000553801 APAF1O14727 1248 aa22.83■■□□□ 1.25
SYNE2-211ENST00000553801 CTSWP56202 376 aa22.83■■□□□ 1.25
SYNE2-211ENST00000553801 OGFOD1Q8N543 542 aa22.83■■□□□ 1.25
SYNE2-211ENST00000553801 SOX10P56693 466 aa22.82■■□□□ 1.24
SYNE2-211ENST00000553801 BSDC1Q9NW68 430 aaPredicted RBP22.82■■□□□ 1.24
SYNE2-211ENST00000553801 MAP3K2Q9Y2U5 619 aa22.82■■□□□ 1.24
SYNE2-211ENST00000553801 MED23Q9ULK4 1368 aa22.81■■□□□ 1.24
SYNE2-211ENST00000553801 NF2P35240 595 aa22.81■■□□□ 1.24
SYNE2-211ENST00000553801 MMP14P50281 582 aa22.81■■□□□ 1.24
SYNE2-211ENST00000553801 C8orf58Q8NAV2 365 aa22.81■■□□□ 1.24
SYNE2-211ENST00000553801 MINPP1Q9UNW1 487 aa22.81■■□□□ 1.24
SYNE2-211ENST00000553801 MYO3BQ8WXR4 1341 aa22.81■■□□□ 1.24
SYNE2-211ENST00000553801 NEXNQ0ZGT2 675 aa22.8■■□□□ 1.24
SYNE2-211ENST00000553801 TTLL12Q14166 644 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms