RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 PARP3Q9Y6F1 533 aa17.22■□□□□ 0.35
ABCD4-219ENST00000553745 GSPT1P15170 499 aaKnown RBP17.21■□□□□ 0.35
ABCD4-219ENST00000553745 RBM25P49756 843 aaKnown RBP17.21■□□□□ 0.35
ABCD4-219ENST00000553745 TNNI3KQ59H18 835 aa17.21■□□□□ 0.35
ABCD4-219ENST00000553745 CDC5LQ99459 802 aaKnown RBP17.21■□□□□ 0.35
ABCD4-219ENST00000553745 TLR7Q9NYK1 1049 aaKnown RBP17.21■□□□□ 0.35
ABCD4-219ENST00000553745 RIPOR2Q9Y4F9 1068 aa17.21■□□□□ 0.35
ABCD4-219ENST00000553745 FPGT-TNNI3KV9GXZ4 949 aa17.21■□□□□ 0.35
ABCD4-219ENST00000553745 AK9Q5TCS8 1911 aa17.21■□□□□ 0.35
ABCD4-219ENST00000553745 IFIT2P09913 472 aaKnown RBP17.2■□□□□ 0.34
ABCD4-219ENST00000553745 IGHMBP2P38935 993 aaKnown RBP17.2■□□□□ 0.34
ABCD4-219ENST00000553745 TTC22Q5TAA0 569 aa17.2■□□□□ 0.34
ABCD4-219ENST00000553745 CCDC8Q9H0W5 538 aaPredicted RBP17.2■□□□□ 0.34
ABCD4-219ENST00000553745 OSBPL3Q9H4L5 887 aa17.2■□□□□ 0.34
ABCD4-219ENST00000553745 METTL24Q5JXM2 366 aa17.2■□□□□ 0.34
ABCD4-219ENST00000553745 CELF1Q92879 486 aaKnown RBP17.2■□□□□ 0.34
ABCD4-219ENST00000553745 MPHOSPH8Q99549 860 aa17.2■□□□□ 0.34
ABCD4-219ENST00000553745 CACNA1SQ13698 1873 aa17.19■□□□□ 0.34
ABCD4-219ENST00000553745 ANKRD18AQ8IVF6 992 aa17.19■□□□□ 0.34
ABCD4-219ENST00000553745 CEP126Q9P2H0 1117 aa17.19■□□□□ 0.34
ABCD4-219ENST00000553745 STAP2Q9UGK3 403 aa17.19■□□□□ 0.34
ABCD4-219ENST00000553745 CRY2Q49AN0 593 aa17.18■□□□□ 0.34
ABCD4-219ENST00000553745 ANTXR1Q9H6X2 564 aa17.18■□□□□ 0.34
ABCD4-219ENST00000553745 AOX1Q06278 1338 aa17.18■□□□□ 0.34
ABCD4-219ENST00000553745 DDX46Q7L014 1031 aaKnown RBP17.17■□□□□ 0.34
ABCD4-219ENST00000553745 VGLL2Q8N8G2 317 aa17.17■□□□□ 0.34
ABCD4-219ENST00000553745 GPR108Q9NPR9 543 aa17.17■□□□□ 0.34
ABCD4-219ENST00000553745 DBNLQ9UJU6 430 aaKnown RBP17.17■□□□□ 0.34
ABCD4-219ENST00000553745 TBC1D9Q6ZT07 1266 aa17.17■□□□□ 0.34
ABCD4-219ENST00000553745 PI4K2BQ8TCG2 481 aa17.17■□□□□ 0.34
ABCD4-219ENST00000553745 DBNDD2Q9BQY9 259 aa17.17■□□□□ 0.34
ABCD4-219ENST00000553745 TTC41PQ6P2S7 1318 aa17.16■□□□□ 0.34
ABCD4-219ENST00000553745 MROH5Q6ZUA9 1318 aa17.16■□□□□ 0.34
ABCD4-219ENST00000553745 A0A1B0GUL7 405 aa17.16■□□□□ 0.34
ABCD4-219ENST00000553745 SLC16A10Q8TF71 515 aa17.16■□□□□ 0.34
ABCD4-219ENST00000553745 RPGRQ92834 1020 aaKnown RBP17.16■□□□□ 0.34
ABCD4-219ENST00000553745 LRRC37AA6NMS7 1700 aa17.15■□□□□ 0.34
ABCD4-219ENST00000553745 TIMM10P62072 90 aa17.15■□□□□ 0.34
ABCD4-219ENST00000553745 R3HDM1Q15032 1099 aaKnown RBP17.15■□□□□ 0.34
ABCD4-219ENST00000553745 ILDR2Q71H61 639 aa17.15■□□□□ 0.34
ABCD4-219ENST00000553745 HELBQ8NG08 1087 aaPredicted RBP17.15■□□□□ 0.34
ABCD4-219ENST00000553745 GPATCH3Q96I76 525 aa17.15■□□□□ 0.34
ABCD4-219ENST00000553745 BRIP1Q9BX63 1249 aa17.15■□□□□ 0.34
ABCD4-219ENST00000553745 BSDC1Q9NW68 430 aaPredicted RBP17.15■□□□□ 0.34
ABCD4-219ENST00000553745 KLRG2A4D1S0 409 aaPredicted RBP17.15■□□□□ 0.34
ABCD4-219ENST00000553745 PDE8BO95263 885 aa17.15■□□□□ 0.34
ABCD4-219ENST00000553745 CHRNDQ07001 517 aa17.15■□□□□ 0.34
ABCD4-219ENST00000553745 GRAPQ13588 217 aa17.15■□□□□ 0.34
ABCD4-219ENST00000553745 GRAPLQ8TC17 118 aaPredicted RBP17.15■□□□□ 0.34
ABCD4-219ENST00000553745 NEUROD6Q96NK8 337 aa17.15■□□□□ 0.34
ABCD4-219ENST00000553745 ECHDC1Q9NTX5 307 aa17.15■□□□□ 0.34
ABCD4-219ENST00000553745 AKAP2Q9Y2D5 859 aa17.15■□□□□ 0.34
ABCD4-219ENST00000553745 CDC45O75419 566 aa17.14■□□□□ 0.33
ABCD4-219ENST00000553745 RPS8P62241 208 aaKnown RBP17.14■□□□□ 0.33
ABCD4-219ENST00000553745 ATP2B3Q16720 1220 aa17.14■□□□□ 0.33
ABCD4-219ENST00000553745 KIF13BQ9NQT8 1826 aa17.14■□□□□ 0.33
ABCD4-219ENST00000553745 DLEC1Q9Y238 1755 aa17.14■□□□□ 0.33
ABCD4-219ENST00000553745 TAF5LO75529 589 aa17.13■□□□□ 0.33
ABCD4-219ENST00000553745 SLC51AQ86UW1 340 aa17.13■□□□□ 0.33
ABCD4-219ENST00000553745 C10orf71Q711Q0 1435 aa17.13■□□□□ 0.33
ABCD4-219ENST00000553745 ERC2O15083 957 aa17.12■□□□□ 0.33
ABCD4-219ENST00000553745 ZBTB7AO95365 584 aa17.12■□□□□ 0.33
ABCD4-219ENST00000553745 SDSP20132 328 aa17.12■□□□□ 0.33
ABCD4-219ENST00000553745 ADORA1P30542 326 aa17.12■□□□□ 0.33
ABCD4-219ENST00000553745 RBM17Q96I25 401 aaKnown RBP17.12■□□□□ 0.33
ABCD4-219ENST00000553745 KIF2CQ99661 725 aa17.12■□□□□ 0.33
ABCD4-219ENST00000553745 SNAP23O00161 211 aa17.12■□□□□ 0.33
ABCD4-219ENST00000553745 FRAT2O75474 233 aaPredicted RBP17.12■□□□□ 0.33
ABCD4-219ENST00000553745 GLRX3O76003 335 aaKnown RBP17.12■□□□□ 0.33
ABCD4-219ENST00000553745 PDE6BP35913 854 aa17.12■□□□□ 0.33
ABCD4-219ENST00000553745 PUM3Q15397 648 aaKnown RBP17.12■□□□□ 0.33
ABCD4-219ENST00000553745 SNX21Q969T3 373 aa17.12■□□□□ 0.33
ABCD4-219ENST00000553745 MINPP1Q9UNW1 487 aa17.12■□□□□ 0.33
ABCD4-219ENST00000553745 MAP4K4O95819 1239 aaPredicted RBP17.11■□□□□ 0.33
ABCD4-219ENST00000553745 SRGNP10124 158 aa17.11■□□□□ 0.33
ABCD4-219ENST00000553745 FGFR2P21802 821 aa17.11■□□□□ 0.33
ABCD4-219ENST00000553745 HOXA10P31260 410 aaPredicted RBP17.11■□□□□ 0.33
ABCD4-219ENST00000553745 XAGE2Q96GT9 111 aa17.11■□□□□ 0.33
ABCD4-219ENST00000553745 PSDA5PKW4 1024 aaPredicted RBP17.1■□□□□ 0.33
ABCD4-219ENST00000553745 SLKQ9H2G2 1235 aaPredicted RBP17.1■□□□□ 0.33
ABCD4-219ENST00000553745 LTBP1Q14766 1721 aa17.1■□□□□ 0.33
ABCD4-219ENST00000553745 AKAP11Q9UKA4 1901 aa17.1■□□□□ 0.33
ABCD4-219ENST00000553745 TRIM6-TRIM34B2RNG4 842 aa17.1■□□□□ 0.33
ABCD4-219ENST00000553745 LPIN2Q92539 896 aa17.1■□□□□ 0.33
ABCD4-219ENST00000553745 CRAMP1Q96RY5 1269 aa17.1■□□□□ 0.33
ABCD4-219ENST00000553745 MTFR1LQ9H019 292 aa17.1■□□□□ 0.33
ABCD4-219ENST00000553745 BOLA2Q9H3K6 86 aa17.1■□□□□ 0.33
ABCD4-219ENST00000553745 KIAA1551Q9HCM1 1747 aa17.09■□□□□ 0.33
ABCD4-219ENST00000553745 EIF5BO60841 1220 aaKnown RBP17.09■□□□□ 0.33
ABCD4-219ENST00000553745 NPR1P16066 1061 aa17.09■□□□□ 0.33
ABCD4-219ENST00000553745 SLC5A1P13866 664 aa17.08■□□□□ 0.33
ABCD4-219ENST00000553745 ATP5JP18859 108 aa17.08■□□□□ 0.33
ABCD4-219ENST00000553745 RILPL2Q969X0 211 aa17.08■□□□□ 0.33
ABCD4-219ENST00000553745 ATF5Q9Y2D1 282 aaPredicted RBP17.08■□□□□ 0.33
ABCD4-219ENST00000553745 MYH13Q9UKX3 1938 aa17.08■□□□□ 0.32
ABCD4-219ENST00000553745 GORABQ5T7V8 394 aa17.07■□□□□ 0.32
ABCD4-219ENST00000553745 C2CD5Q86YS7 1000 aa17.07■□□□□ 0.32
ABCD4-219ENST00000553745 MASTLQ96GX5 879 aa17.07■□□□□ 0.32
ABCD4-219ENST00000553745 NDUFB9Q9Y6M9 179 aa17.07■□□□□ 0.32
ABCD4-219ENST00000553745 SLX4Q8IY92 1834 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms