RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 PIP4K2BP78356 416 aa12.79□□□□□ -0.36
TTC8-208ENST00000553718 ZSCAN25Q6NSZ9 544 aa12.79□□□□□ -0.36
TTC8-208ENST00000553718 NOL8Q76FK4 1167 aaKnown RBP12.79□□□□□ -0.36
TTC8-208ENST00000553718 NLRP10Q86W26 655 aa12.79□□□□□ -0.36
TTC8-208ENST00000553718 CCDC83Q8IWF9 413 aa12.79□□□□□ -0.36
TTC8-208ENST00000553718 DNAJC2Q99543 621 aaKnown RBP12.79□□□□□ -0.36
TTC8-208ENST00000553718 CTNNA3Q9UI47 895 aa12.79□□□□□ -0.36
TTC8-208ENST00000553718 TPCN1Q9ULQ1 816 aa12.79□□□□□ -0.36
TTC8-208ENST00000553718 MTMR6Q9Y217 621 aa12.79□□□□□ -0.36
TTC8-208ENST00000553718 ITGB4P16144 1822 aa12.78□□□□□ -0.36
TTC8-208ENST00000553718 CICQ96RK0 1608 aaPredicted RBP12.78□□□□□ -0.36
TTC8-208ENST00000553718 ANKRD18BA2A2Z9 1011 aa12.78□□□□□ -0.36
TTC8-208ENST00000553718 PDE8AO60658 829 aa12.78□□□□□ -0.36
TTC8-208ENST00000553718 TIMM10P62072 90 aa12.78□□□□□ -0.36
TTC8-208ENST00000553718 TOB2Q14106 344 aaPredicted RBP12.78□□□□□ -0.36
TTC8-208ENST00000553718 UVSSAQ2YD98 709 aa12.78□□□□□ -0.36
TTC8-208ENST00000553718 LRRC24Q50LG9 513 aa12.78□□□□□ -0.36
TTC8-208ENST00000553718 DHX32Q7L7V1 743 aaKnown RBP12.78□□□□□ -0.36
TTC8-208ENST00000553718 USP48Q86UV5 1035 aa12.78□□□□□ -0.36
TTC8-208ENST00000553718 FAM184AQ8NB25 1140 aa12.78□□□□□ -0.36
TTC8-208ENST00000553718 TMEM63CQ9P1W3 806 aa12.78□□□□□ -0.36
TTC8-208ENST00000553718 RIPOR2Q9Y4F9 1068 aa12.78□□□□□ -0.36
TTC8-208ENST00000553718 LARGE1O95461 756 aa12.77□□□□□ -0.37
TTC8-208ENST00000553718 CYP21A2P08686 494 aa12.77□□□□□ -0.37
TTC8-208ENST00000553718 TTF1Q15361 905 aaPredicted RBP12.77□□□□□ -0.37
TTC8-208ENST00000553718 LARP1BQ659C4 914 aaKnown RBP12.77□□□□□ -0.37
TTC8-208ENST00000553718 BARGINQ6ZT62 677 aa12.77□□□□□ -0.37
TTC8-208ENST00000553718 ZNF34Q8IZ26 560 aa12.77□□□□□ -0.37
TTC8-208ENST00000553718 TTLL11Q8NHH1 800 aa12.77□□□□□ -0.37
TTC8-208ENST00000553718 XAGE2Q96GT9 111 aa12.77□□□□□ -0.37
TTC8-208ENST00000553718 KIF3AQ9Y496 699 aa12.77□□□□□ -0.37
TTC8-208ENST00000553718 ELP1O95163 1332 aa12.77□□□□□ -0.37
TTC8-208ENST00000553718 WNK3Q9BYP7 1800 aa12.76□□□□□ -0.37
TTC8-208ENST00000553718 GOLIM4O00461 696 aa12.76□□□□□ -0.37
TTC8-208ENST00000553718 EIF5P55010 431 aaKnown RBP12.76□□□□□ -0.37
TTC8-208ENST00000553718 EVCP57679 992 aa12.76□□□□□ -0.37
TTC8-208ENST00000553718 EXOSC10Q01780 885 aaKnown RBP12.76□□□□□ -0.37
TTC8-208ENST00000553718 ST3GAL1Q11201 340 aa12.76□□□□□ -0.37
TTC8-208ENST00000553718 PARP10Q53GL7 1025 aa12.76□□□□□ -0.37
TTC8-208ENST00000553718 TAF7LQ5H9L4 462 aa12.76□□□□□ -0.37
TTC8-208ENST00000553718 TTC39AQ5SRH9 613 aa12.76□□□□□ -0.37
TTC8-208ENST00000553718 DDX46Q7L014 1031 aaKnown RBP12.76□□□□□ -0.37
TTC8-208ENST00000553718 TRIM44Q96DX7 344 aaPredicted RBP12.76□□□□□ -0.37
TTC8-208ENST00000553718 EDC3Q96F86 508 aaKnown RBP12.76□□□□□ -0.37
TTC8-208ENST00000553718 PANK2Q9BZ23 570 aa12.76□□□□□ -0.37
TTC8-208ENST00000553718 SPATA31A1Q5TZJ5 1347 aa12.76□□□□□ -0.37
TTC8-208ENST00000553718 WDR19Q8NEZ3 1342 aa12.76□□□□□ -0.37
TTC8-208ENST00000553718 COL16A1Q07092 1604 aaPredicted RBP12.76□□□□□ -0.37
TTC8-208ENST00000553718 ROBO1Q9Y6N7 1651 aa12.76□□□□□ -0.37
TTC8-208ENST00000553718 UQCRFS1P1P0C7P4 283 aa12.75□□□□□ -0.37
TTC8-208ENST00000553718 HSPD1P10809 573 aaKnown RBP12.75□□□□□ -0.37
TTC8-208ENST00000553718 CPA1P15085 419 aa12.75□□□□□ -0.37
TTC8-208ENST00000553718 CLCN1P35523 988 aa12.75□□□□□ -0.37
TTC8-208ENST00000553718 CTSWP56202 376 aa12.75□□□□□ -0.37
TTC8-208ENST00000553718 HMGN5P82970 282 aaKnown RBP12.75□□□□□ -0.37
TTC8-208ENST00000553718 CCDC183Q5T5S1 534 aa12.75□□□□□ -0.37
TTC8-208ENST00000553718 GORABQ5T7V8 394 aa12.75□□□□□ -0.37
TTC8-208ENST00000553718 ATL3Q6DD88 541 aa12.75□□□□□ -0.37
TTC8-208ENST00000553718 SMARCC2Q8TAQ2 1214 aa12.75□□□□□ -0.37
TTC8-208ENST00000553718 APPBP2Q92624 585 aa12.75□□□□□ -0.37
TTC8-208ENST00000553718 SMARCC1Q92922 1105 aaPredicted RBP12.75□□□□□ -0.37
TTC8-208ENST00000553718 GTF3C6Q969F1 213 aa12.75□□□□□ -0.37
TTC8-208ENST00000553718 ZNF274Q96GC6 653 aaPredicted RBP12.75□□□□□ -0.37
TTC8-208ENST00000553718 PUS3Q9BZE2 481 aaKnown RBP12.75□□□□□ -0.37
TTC8-208ENST00000553718 ZSCAN16Q9H4T2 348 aaPredicted RBP12.75□□□□□ -0.37
TTC8-208ENST00000553718 ANKRD36CQ5JPF3 1778 aa12.74□□□□□ -0.37
TTC8-208ENST00000553718 RTL9Q8NET4 1388 aa12.74□□□□□ -0.37
TTC8-208ENST00000553718 MROH5Q6ZUA9 1318 aa12.74□□□□□ -0.37
TTC8-208ENST00000553718 IRS4O14654 1257 aaPredicted RBP12.74□□□□□ -0.37
TTC8-208ENST00000553718 TOM1O60784 492 aa12.74□□□□□ -0.37
TTC8-208ENST00000553718 PFKFB2O60825 505 aa12.74□□□□□ -0.37
TTC8-208ENST00000553718 PRIM1P49642 420 aaKnown RBP12.74□□□□□ -0.37
TTC8-208ENST00000553718 KRT85P78386 507 aa12.74□□□□□ -0.37
TTC8-208ENST00000553718 DZIP3Q86Y13 1208 aaKnown RBP12.74□□□□□ -0.37
TTC8-208ENST00000553718 FAM89AQ96GI7 184 aa12.74□□□□□ -0.37
TTC8-208ENST00000553718 ZNF594Q96JF6 807 aaPredicted RBP12.74□□□□□ -0.37
TTC8-208ENST00000553718 PDLIM2Q96JY6 352 aa12.74□□□□□ -0.37
TTC8-208ENST00000553718 SLC4A9Q96Q91 983 aa12.74□□□□□ -0.37
TTC8-208ENST00000553718 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.74□□□□□ -0.37
TTC8-208ENST00000553718 SCAND2PQ9GZW5 306 aaPredicted RBP12.74□□□□□ -0.37
TTC8-208ENST00000553718 PDE8BO95263 885 aa12.73□□□□□ -0.37
TTC8-208ENST00000553718 ITGA6P23229 1130 aa12.73□□□□□ -0.37
TTC8-208ENST00000553718 UBE3CQ15386 1083 aa12.73□□□□□ -0.37
TTC8-208ENST00000553718 DDB1Q16531 1140 aa12.73□□□□□ -0.37
TTC8-208ENST00000553718 HLFQ16534 295 aa12.73□□□□□ -0.37
TTC8-208ENST00000553718 ATP2B3Q16720 1220 aa12.73□□□□□ -0.37
TTC8-208ENST00000553718 LDHAL6AQ6ZMR3 332 aa12.73□□□□□ -0.37
TTC8-208ENST00000553718 Q6ZUG5 572 aa12.73□□□□□ -0.37
TTC8-208ENST00000553718 VGLL2Q8N8G2 317 aa12.73□□□□□ -0.37
TTC8-208ENST00000553718 TSPY26PQ9H489 355 aa12.73□□□□□ -0.37
TTC8-208ENST00000553718 ZBTB1Q9Y2K1 713 aa12.73□□□□□ -0.37
TTC8-208ENST00000553718 RREB1Q92766 1687 aa12.73□□□□□ -0.37
TTC8-208ENST00000553718 MAST3O60307 1309 aa12.72□□□□□ -0.37
TTC8-208ENST00000553718 ARID4AP29374 1257 aaPredicted RBP12.72□□□□□ -0.37
TTC8-208ENST00000553718 METTL24Q5JXM2 366 aa12.72□□□□□ -0.37
TTC8-208ENST00000553718 FOXD4L5Q5VV16 416 aaPredicted RBP12.72□□□□□ -0.37
TTC8-208ENST00000553718 NAA16Q6N069 864 aaPredicted RBP12.72□□□□□ -0.37
TTC8-208ENST00000553718 FOXD4L4Q8WXT5 416 aaPredicted RBP12.72□□□□□ -0.37
TTC8-208ENST00000553718 SEC62Q99442 399 aaKnown RBP12.72□□□□□ -0.37
TTC8-208ENST00000553718 RBSNQ9H1K0 784 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms