RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 LMBR1LQ6UX01 489 aa17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 SLF2Q8IX21 1173 aa17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 LINS1Q8NG48 757 aa17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 TCP11L1Q9NUJ3 509 aa17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 LMTK2Q8IWU2 1503 aa17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 NMIQ13287 307 aaPredicted RBP17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 Q6ZUG5 572 aa17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 CCDC12Q8WUD4 166 aaPredicted RBP17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 PLEKHG1Q9ULL1 1385 aa17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 PDE4BQ07343 736 aa17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 CEP135Q66GS9 1140 aa17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 DACT1Q9NYF0 836 aa17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 PAXBP1Q9Y5B6 917 aa17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 NPHP3Q7Z494 1330 aa17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 CALRP27797 417 aaKnown RBP17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 SLC39A6Q13433 755 aa17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 UBE2Q2Q8WVN8 375 aa17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 PA2G4Q9UQ80 394 aaKnown RBP17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 IL15P40933 162 aaPredicted RBP17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 MTIF2P46199 727 aaKnown RBP17.65■□□□□ 0.42
ARHGEF40-202ENST00000553709 TSPY2A6NKD2 308 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 TMX1Q9H3N1 280 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 PRDM10Q9NQV6 1147 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 RIMBP3CA6NJZ7 1639 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 RIMBP3BA6NNM3 1639 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 RIMBP3Q9UFD9 1639 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 ZBTB43O43298 467 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 TNIP1Q15025 636 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 MRPS27Q92552 414 aaKnown RBP17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 NLRP1Q9C000 1473 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 PAFAH1B1P43034 410 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 AMPD3Q01432 767 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 UBA5Q9GZZ9 404 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 UBA7P41226 1012 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 PRIM1P49642 420 aaKnown RBP17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 ATP2B3Q16720 1220 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 TDRD12Q587J7 1177 aaKnown RBP17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 ANKRD18AQ8IVF6 992 aa17.64■□□□□ 0.41
ARHGEF40-202ENST00000553709 CCDC171Q6TFL3 1326 aa17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 WTAPQ15007 396 aa17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 CALML4Q96GE6 196 aa17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 ZNF830Q96NB3 372 aaPredicted RBP17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 ALG1Q9BT22 464 aa17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 KAT14Q9H8E8 782 aa17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 ZBTB7BO15156 539 aaPredicted RBP17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 AK2P54819 239 aa17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 TAF3Q5VWG9 929 aa17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 INTS4Q96HW7 963 aaKnown RBP17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 USP26Q9BXU7 913 aa17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 KRT23Q9C075 422 aa17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 ADAMTS2O95450 1211 aa17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 LDHCP07864 332 aa17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 NOLC1Q14978 699 aaKnown RBP eCLIP17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 SOS1Q07889 1333 aaPredicted RBP17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 POTEB2H3BUK9 544 aa17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 ZGPATQ8N5A5 531 aaKnown RBP17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 RPGRQ92834 1020 aaKnown RBP17.63■□□□□ 0.41
ARHGEF40-202ENST00000553709 CHMLP26374 656 aa17.62■□□□□ 0.41
ARHGEF40-202ENST00000553709 MATR3P43243 847 aaKnown RBP eCLIP17.62■□□□□ 0.41
ARHGEF40-202ENST00000553709 METP08581 1390 aa17.62■□□□□ 0.41
ARHGEF40-202ENST00000553709 LUZP1Q86V48 1076 aa17.62■□□□□ 0.41
ARHGEF40-202ENST00000553709 PLEKHG3A1L390 1219 aa17.62■□□□□ 0.41
ARHGEF40-202ENST00000553709 ZKSCAN5Q9Y2L8 839 aa17.62■□□□□ 0.41
ARHGEF40-202ENST00000553709 MAP3K5Q99683 1374 aa17.62■□□□□ 0.41
ARHGEF40-202ENST00000553709 PPP4R3BQ5MIZ7 849 aa17.62■□□□□ 0.41
ARHGEF40-202ENST00000553709 CCDC186Q7Z3E2 898 aa17.62■□□□□ 0.41
ARHGEF40-202ENST00000553709 BLMP54132 1417 aaPredicted RBP17.62■□□□□ 0.41
ARHGEF40-202ENST00000553709 USP8P40818 1118 aa17.61■□□□□ 0.41
ARHGEF40-202ENST00000553709 ZRSR2Q15696 482 aaKnown RBP17.61■□□□□ 0.41
ARHGEF40-202ENST00000553709 ZMYM4Q5VZL5 1548 aa17.61■□□□□ 0.41
ARHGEF40-202ENST00000553709 BAG3O95817 575 aa17.61■□□□□ 0.41
ARHGEF40-202ENST00000553709 POTEJP0CG39 1038 aa17.61■□□□□ 0.41
ARHGEF40-202ENST00000553709 UBASH3AP57075 661 aa17.61■□□□□ 0.41
ARHGEF40-202ENST00000553709 TMTC2Q8N394 836 aa17.61■□□□□ 0.41
ARHGEF40-202ENST00000553709 CNNM2Q9H8M5 875 aa17.61■□□□□ 0.41
ARHGEF40-202ENST00000553709 ANKRD62A6NC57 917 aa17.61■□□□□ 0.41
ARHGEF40-202ENST00000553709 IDEP14735 1019 aa17.61■□□□□ 0.41
ARHGEF40-202ENST00000553709 SSR1P43307 286 aaKnown RBP17.61■□□□□ 0.41
ARHGEF40-202ENST00000553709 FAM114A1Q8IWE2 563 aa17.61■□□□□ 0.41
ARHGEF40-202ENST00000553709 ZCRB1Q8TBF4 217 aaKnown RBP17.61■□□□□ 0.41
ARHGEF40-202ENST00000553709 CEP152O94986 1710 aa17.61■□□□□ 0.41
ARHGEF40-202ENST00000553709 SHTN1A0MZ66 631 aa17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 GNG11P61952 73 aa17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 CUL5Q93034 780 aa17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 PAG1Q9NWQ8 432 aa17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 SKILP12757 684 aa17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 CCDC152Q4G0S7 254 aa17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 EYA1Q99502 592 aa17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 DNAJC25Q9H1X3 360 aa17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 POLR3GO15318 223 aaPredicted RBP17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 BMP15O95972 392 aa17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 CETN2P41208 172 aa17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 CREB3L3Q68CJ9 461 aa17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 SPTY2D1Q68D10 685 aaPredicted RBP17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 NGLY1Q96IV0 654 aa17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 KDM2BQ8NHM5 1336 aa17.6■□□□□ 0.41
ARHGEF40-202ENST00000553709 DNA2P51530 1060 aa17.59■□□□□ 0.41
ARHGEF40-202ENST00000553709 ALS2CR12Q96Q35 445 aa17.59■□□□□ 0.41
ARHGEF40-202ENST00000553709 CRNKL1Q9BZJ0 848 aaKnown RBP17.59■□□□□ 0.41
ARHGEF40-202ENST00000553709 N4BP3O15049 544 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms