RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 KIAA1551Q9HCM1 1747 aa8.03□□□□□ -1.12
SMARCE1P3-201ENST00000553649 A0A0G2JLW4 131 aa8.03□□□□□ -1.12
SMARCE1P3-201ENST00000553649 VEGFAP15692 232 aaPredicted RBP8.03□□□□□ -1.12
SMARCE1P3-201ENST00000553649 FLAD1Q8NFF5 587 aa8.03□□□□□ -1.12
SMARCE1P3-201ENST00000553649 COL25A1Q9BXS0 654 aaPredicted RBP8.03□□□□□ -1.12
SMARCE1P3-201ENST00000553649 PKD1L3Q7Z443 1732 aa8.03□□□□□ -1.12
SMARCE1P3-201ENST00000553649 USP54Q70EL1 1684 aa8.02□□□□□ -1.13
SMARCE1P3-201ENST00000553649 ANKRD36BQ8N2N9 1353 aa8.02□□□□□ -1.13
SMARCE1P3-201ENST00000553649 PER1O15534 1290 aaPredicted RBP8.02□□□□□ -1.13
SMARCE1P3-201ENST00000553649 TGFB2P61812 414 aa8.02□□□□□ -1.13
SMARCE1P3-201ENST00000553649 PTSQ03393 145 aa8.02□□□□□ -1.13
SMARCE1P3-201ENST00000553649 LY75O60449 1722 aa8.02□□□□□ -1.13
SMARCE1P3-201ENST00000553649 SPTLC1O15269 473 aa8.01□□□□□ -1.13
SMARCE1P3-201ENST00000553649 ARHGEF15O94989 841 aa8.01□□□□□ -1.13
SMARCE1P3-201ENST00000553649 IL2RBP14784 551 aa8.01□□□□□ -1.13
SMARCE1P3-201ENST00000553649 DPEP1P16444 411 aa8.01□□□□□ -1.13
SMARCE1P3-201ENST00000553649 NBPF1Q3BBV0 1214 aa8.01□□□□□ -1.13
SMARCE1P3-201ENST00000553649 RSBN1LQ6PCB5 846 aaPredicted RBP8.01□□□□□ -1.13
SMARCE1P3-201ENST00000553649 PDE4DIPQ5VU43 2346 aa8□□□□□ -1.13
SMARCE1P3-201ENST00000553649 UPP2O95045 317 aa8□□□□□ -1.13
SMARCE1P3-201ENST00000553649 KCNH5Q8NCM2 988 aa8□□□□□ -1.13
SMARCE1P3-201ENST00000553649 NANOS1Q8WY41 292 aaKnown RBP8□□□□□ -1.13
SMARCE1P3-201ENST00000553649 SYTL4Q96C24 671 aaPredicted RBP8□□□□□ -1.13
SMARCE1P3-201ENST00000553649 DCAF5Q96JK2 942 aa8□□□□□ -1.13
SMARCE1P3-201ENST00000553649 C1QTNF2Q9BXJ5 285 aa8□□□□□ -1.13
SMARCE1P3-201ENST00000553649 TBC1D2Q9BYX2 928 aa8□□□□□ -1.13
SMARCE1P3-201ENST00000553649 CABP1Q9NZU7 370 aa8□□□□□ -1.13
SMARCE1P3-201ENST00000553649 GLTPD2A6NH11 291 aa7.99□□□□□ -1.13
SMARCE1P3-201ENST00000553649 FIGNL2A6NMB9 653 aa7.99□□□□□ -1.13
SMARCE1P3-201ENST00000553649 KCNA3P22001 575 aa7.99□□□□□ -1.13
SMARCE1P3-201ENST00000553649 GJA5P36382 358 aa7.99□□□□□ -1.13
SMARCE1P3-201ENST00000553649 AGERQ15109 404 aa7.99□□□□□ -1.13
SMARCE1P3-201ENST00000553649 SH3RF1Q7Z6J0 888 aa7.99□□□□□ -1.13
SMARCE1P3-201ENST00000553649 BPHLQ86WA6 291 aaPredicted RBP7.99□□□□□ -1.13
SMARCE1P3-201ENST00000553649 DDX54Q8TDD1 881 aaKnown RBP7.99□□□□□ -1.13
SMARCE1P3-201ENST00000553649 BEGAINQ9BUH8 593 aa7.99□□□□□ -1.13
SMARCE1P3-201ENST00000553649 MCOLN1Q9GZU1 580 aa7.99□□□□□ -1.13
SMARCE1P3-201ENST00000553649 TOGARAM1Q9Y4F4 1720 aa7.99□□□□□ -1.13
SMARCE1P3-201ENST00000553649 CENPJQ9HC77 1338 aaPredicted RBP7.99□□□□□ -1.13
SMARCE1P3-201ENST00000553649 ZC3H4Q9UPT8 1303 aaKnown RBP7.99□□□□□ -1.13
SMARCE1P3-201ENST00000553649 KDM6AO15550 1401 aaPredicted RBP7.98□□□□□ -1.13
SMARCE1P3-201ENST00000553649 TTLL8A6PVC2 850 aa7.98□□□□□ -1.13
SMARCE1P3-201ENST00000553649 RNF225M0QZC1 329 aaPredicted RBP7.98□□□□□ -1.13
SMARCE1P3-201ENST00000553649 MMP10P09238 476 aa7.98□□□□□ -1.13
SMARCE1P3-201ENST00000553649 FSHRP23945 695 aa7.98□□□□□ -1.13
SMARCE1P3-201ENST00000553649 IRS1P35568 1242 aa7.98□□□□□ -1.13
SMARCE1P3-201ENST00000553649 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.98□□□□□ -1.13
SMARCE1P3-201ENST00000553649 GPAT2Q6NUI2 795 aa7.98□□□□□ -1.13
SMARCE1P3-201ENST00000553649 TSEN34Q9BSV6 310 aaKnown RBP7.98□□□□□ -1.13
SMARCE1P3-201ENST00000553649 PASKQ96RG2 1323 aa7.98□□□□□ -1.13
SMARCE1P3-201ENST00000553649 SLURP2P0DP57 97 aa7.97□□□□□ -1.13
SMARCE1P3-201ENST00000553649 GIGYF2Q6Y7W6 1299 aaKnown RBP7.97□□□□□ -1.13
SMARCE1P3-201ENST00000553649 CCDC155Q8N6L0 562 aa7.97□□□□□ -1.13
SMARCE1P3-201ENST00000553649 NLRP2Q9NX02 1062 aa7.97□□□□□ -1.13
SMARCE1P3-201ENST00000553649 USP47Q96K76 1375 aa7.97□□□□□ -1.13
SMARCE1P3-201ENST00000553649 SLC35F4A4IF30 521 aa7.96□□□□□ -1.14
SMARCE1P3-201ENST00000553649 TULP1O00294 542 aaPredicted RBP7.96□□□□□ -1.14
SMARCE1P3-201ENST00000553649 MAP2K1Q02750 393 aaPredicted RBP7.96□□□□□ -1.14
SMARCE1P3-201ENST00000553649 CBLBQ13191 982 aa7.96□□□□□ -1.14
SMARCE1P3-201ENST00000553649 TTLL12Q14166 644 aaPredicted RBP7.96□□□□□ -1.14
SMARCE1P3-201ENST00000553649 AMHR2Q16671 573 aa7.96□□□□□ -1.14
SMARCE1P3-201ENST00000553649 SVOPQ8N4V2 548 aa7.96□□□□□ -1.14
SMARCE1P3-201ENST00000553649 ZC3H15Q8WU90 426 aaKnown RBP7.96□□□□□ -1.14
SMARCE1P3-201ENST00000553649 DNMT3AQ9Y6K1 912 aaPredicted RBP7.96□□□□□ -1.14
SMARCE1P3-201ENST00000553649 KIF13BQ9NQT8 1826 aa7.96□□□□□ -1.14
SMARCE1P3-201ENST00000553649 C5P01031 1676 aa7.95□□□□□ -1.14
SMARCE1P3-201ENST00000553649 N4BP2Q86UW6 1770 aaPredicted RBP7.95□□□□□ -1.14
SMARCE1P3-201ENST00000553649 RGPD5Q99666 1765 aa7.95□□□□□ -1.14
SMARCE1P3-201ENST00000553649 HMGB2P26583 209 aaKnown RBP7.95□□□□□ -1.14
SMARCE1P3-201ENST00000553649 MAP4K5Q9Y4K4 846 aa7.95□□□□□ -1.14
SMARCE1P3-201ENST00000553649 TTC21BQ7Z4L5 1316 aa7.95□□□□□ -1.14
SMARCE1P3-201ENST00000553649 TTC21AQ8NDW8 1320 aa7.95□□□□□ -1.14
SMARCE1P3-201ENST00000553649 USP31Q70CQ4 1352 aa7.95□□□□□ -1.14
SMARCE1P3-201ENST00000553649 RASSF10A6NK89 507 aa7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 DLL1O00548 723 aa7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 ZMYND10O75800 440 aa7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 SSFA2P28290 1259 aa7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 SOX10P56693 466 aa7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 DALRD3Q5D0E6 543 aaKnown RBP7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 HABP4Q5JVS0 413 aaKnown RBP7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 VASH1Q7L8A9 365 aaPredicted RBP7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 SH3BP5LQ7L8J4 393 aa7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 TRMT44Q8IYL2 757 aaKnown RBP7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 VWA5B2Q8N398 1253 aa7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 AK7Q96M32 723 aa7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 ZBTB3Q9H5J0 574 aa7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 PIM2Q9P1W9 311 aa7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 KAT6BQ8WYB5 2073 aa7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 DOT1LQ8TEK3 1739 aa7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 VIRMAQ69YN4 1812 aaKnown RBP7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 NSD3Q9BZ95 1437 aa7.94□□□□□ -1.14
SMARCE1P3-201ENST00000553649 C4BP0C0L5 1744 aa7.93□□□□□ -1.14
SMARCE1P3-201ENST00000553649 TMEM88BA6NKF7 163 aa7.93□□□□□ -1.14
SMARCE1P3-201ENST00000553649 SPINT1O43278 529 aa7.93□□□□□ -1.14
SMARCE1P3-201ENST00000553649 Q6ZVU0 165 aa7.93□□□□□ -1.14
SMARCE1P3-201ENST00000553649 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.93□□□□□ -1.14
SMARCE1P3-201ENST00000553649 CCDC116Q8IYX3 515 aa7.93□□□□□ -1.14
SMARCE1P3-201ENST00000553649 EMILIN1Q9Y6C2 1016 aa7.93□□□□□ -1.14
SMARCE1P3-201ENST00000553649 EVC2Q86UK5 1308 aa7.93□□□□□ -1.14
SMARCE1P3-201ENST00000553649 WDR33Q9C0J8 1336 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms