RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 SRGNP10124 158 aa12.04□□□□□ -0.48
CHD8-204ENST00000553622 ATG9AQ7Z3C6 839 aa12.04□□□□□ -0.48
CHD8-204ENST00000553622 HELBQ8NG08 1087 aaPredicted RBP12.04□□□□□ -0.48
CHD8-204ENST00000553622 MASTLQ96GX5 879 aa12.04□□□□□ -0.48
CHD8-204ENST00000553622 CEP126Q9P2H0 1117 aa12.04□□□□□ -0.48
CHD8-204ENST00000553622 BRCA1P38398 1863 aaKnown RBP12.04□□□□□ -0.48
CHD8-204ENST00000553622 KIAA1551Q9HCM1 1747 aa12.03□□□□□ -0.48
CHD8-204ENST00000553622 SASH1O94885 1247 aa12.03□□□□□ -0.48
CHD8-204ENST00000553622 PTGER2P43116 358 aa12.03□□□□□ -0.48
CHD8-204ENST00000553622 AACSQ86V21 672 aa12.03□□□□□ -0.48
CHD8-204ENST00000553622 CLASRPQ8N2M8 674 aaKnown RBP12.03□□□□□ -0.48
CHD8-204ENST00000553622 CRAMP1Q96RY5 1269 aa12.03□□□□□ -0.48
CHD8-204ENST00000553622 FBXO3Q9UK99 471 aa12.03□□□□□ -0.48
CHD8-204ENST00000553622 MROH5Q6ZUA9 1318 aa12.03□□□□□ -0.48
CHD8-204ENST00000553622 ARAP2Q8WZ64 1704 aa12.03□□□□□ -0.48
CHD8-204ENST00000553622 A0A0G2JLW4 131 aa12.02□□□□□ -0.49
CHD8-204ENST00000553622 KLRG2A4D1S0 409 aaPredicted RBP12.02□□□□□ -0.49
CHD8-204ENST00000553622 PPEF1O14829 653 aaPredicted RBP12.02□□□□□ -0.49
CHD8-204ENST00000553622 IFIT2P09913 472 aaKnown RBP12.02□□□□□ -0.49
CHD8-204ENST00000553622 DPEP1P16444 411 aa12.02□□□□□ -0.49
CHD8-204ENST00000553622 ALDH1B1P30837 517 aa12.02□□□□□ -0.49
CHD8-204ENST00000553622 HOXA10P31260 410 aaPredicted RBP12.02□□□□□ -0.49
CHD8-204ENST00000553622 CHRNDQ07001 517 aa12.02□□□□□ -0.49
CHD8-204ENST00000553622 STYK1Q6J9G0 422 aa12.02□□□□□ -0.49
CHD8-204ENST00000553622 NEUROD6Q96NK8 337 aa12.02□□□□□ -0.49
CHD8-204ENST00000553622 SGIP1Q9BQI5 828 aa12.02□□□□□ -0.49
CHD8-204ENST00000553622 TMX4Q9H1E5 349 aaPredicted RBP12.02□□□□□ -0.49
CHD8-204ENST00000553622 BSDC1Q9NW68 430 aaPredicted RBP12.02□□□□□ -0.49
CHD8-204ENST00000553622 ZNF219Q9P2Y4 722 aaPredicted RBP12.02□□□□□ -0.49
CHD8-204ENST00000553622 WWC3Q9ULE0 1092 aa12.02□□□□□ -0.49
CHD8-204ENST00000553622 RIPOR2Q9Y4F9 1068 aa12.02□□□□□ -0.49
CHD8-204ENST00000553622 LRRC37AA6NMS7 1700 aa12.02□□□□□ -0.49
CHD8-204ENST00000553622 TAF5LO75529 589 aa12.01□□□□□ -0.49
CHD8-204ENST00000553622 BBOX1O75936 387 aa12.01□□□□□ -0.49
CHD8-204ENST00000553622 KCNJ4P48050 445 aa12.01□□□□□ -0.49
CHD8-204ENST00000553622 C16orf71Q8IYS4 520 aaPredicted RBP12.01□□□□□ -0.49
CHD8-204ENST00000553622 CNKSR1Q969H4 720 aa12.01□□□□□ -0.49
CHD8-204ENST00000553622 ANKIB1Q9P2G1 1089 aa12.01□□□□□ -0.49
CHD8-204ENST00000553622 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.01□□□□□ -0.49
CHD8-204ENST00000553622 PDE4AP27815 886 aa12□□□□□ -0.49
CHD8-204ENST00000553622 ATP2B3Q16720 1220 aa12□□□□□ -0.49
CHD8-204ENST00000553622 TNNI3KQ59H18 835 aa12□□□□□ -0.49
CHD8-204ENST00000553622 PRPF40BQ6NWY9 871 aaKnown RBP12□□□□□ -0.49
CHD8-204ENST00000553622 SLC51AQ86UW1 340 aa12□□□□□ -0.49
CHD8-204ENST00000553622 OTUD7AQ8TE49 926 aaPredicted RBP12□□□□□ -0.49
CHD8-204ENST00000553622 CCDC8Q9H0W5 538 aaPredicted RBP12□□□□□ -0.49
CHD8-204ENST00000553622 MINPP1Q9UNW1 487 aa12□□□□□ -0.49
CHD8-204ENST00000553622 AKAP2Q9Y2D5 859 aa12□□□□□ -0.49
CHD8-204ENST00000553622 FPGT-TNNI3KV9GXZ4 949 aa12□□□□□ -0.49
CHD8-204ENST00000553622 ZNF609O15014 1411 aa12□□□□□ -0.49
CHD8-204ENST00000553622 CHD4Q14839 1912 aa11.99□□□□□ -0.49
CHD8-204ENST00000553622 PDE8BO95263 885 aa11.99□□□□□ -0.49
CHD8-204ENST00000553622 PUM3Q15397 648 aaKnown RBP11.99□□□□□ -0.49
CHD8-204ENST00000553622 GORABQ5T7V8 394 aa11.99□□□□□ -0.49
CHD8-204ENST00000553622 EAF2Q96CJ1 260 aaPredicted RBP11.99□□□□□ -0.49
CHD8-204ENST00000553622 GPATCH3Q96I76 525 aa11.99□□□□□ -0.49
CHD8-204ENST00000553622 ANKRD2Q9GZV1 360 aa11.99□□□□□ -0.49
CHD8-204ENST00000553622 CD2APQ9Y5K6 639 aa11.99□□□□□ -0.49
CHD8-204ENST00000553622 CCDC88AQ3V6T2 1871 aa11.99□□□□□ -0.49
CHD8-204ENST00000553622 ARFGEF1Q9Y6D6 1849 aa11.98□□□□□ -0.49
CHD8-204ENST00000553622 A0A1B0GUL7 405 aa11.98□□□□□ -0.49
CHD8-204ENST00000553622 SNAP23O00161 211 aa11.98□□□□□ -0.49
CHD8-204ENST00000553622 SLC5A1P13866 664 aa11.98□□□□□ -0.49
CHD8-204ENST00000553622 MX1P20591 662 aa11.98□□□□□ -0.49
CHD8-204ENST00000553622 TGFB2P61812 414 aa11.98□□□□□ -0.49
CHD8-204ENST00000553622 TIMM10P62072 90 aa11.98□□□□□ -0.49
CHD8-204ENST00000553622 GPSM2P81274 684 aa11.98□□□□□ -0.49
CHD8-204ENST00000553622 TSHZ3Q63HK5 1081 aa11.98□□□□□ -0.49
CHD8-204ENST00000553622 TMC4Q7Z404 712 aa11.98□□□□□ -0.49
CHD8-204ENST00000553622 TTLL6Q8N841 843 aa11.98□□□□□ -0.49
CHD8-204ENST00000553622 TLR7Q9NYK1 1049 aaKnown RBP11.98□□□□□ -0.49
CHD8-204ENST00000553622 NSFL1CQ9UNZ2 370 aaKnown RBP11.98□□□□□ -0.49
CHD8-204ENST00000553622 ATP6V0A2Q9Y487 856 aa11.98□□□□□ -0.49
CHD8-204ENST00000553622 XDHP47989 1333 aa11.97□□□□□ -0.49
CHD8-204ENST00000553622 UFL1O94874 794 aa11.97□□□□□ -0.49
CHD8-204ENST00000553622 IFIT1P09914 478 aaKnown RBP11.97□□□□□ -0.49
CHD8-204ENST00000553622 ADORA1P30542 326 aa11.97□□□□□ -0.49
CHD8-204ENST00000553622 OLFM4Q6UX06 510 aa11.97□□□□□ -0.49
CHD8-204ENST00000553622 SP8Q8IXZ3 490 aa11.97□□□□□ -0.49
CHD8-204ENST00000553622 VGLL2Q8N8G2 317 aa11.97□□□□□ -0.49
CHD8-204ENST00000553622 DBNDD2Q9BQY9 259 aa11.97□□□□□ -0.49
CHD8-204ENST00000553622 PIM2Q9P1W9 311 aa11.97□□□□□ -0.49
CHD8-204ENST00000553622 MYH7P12883 1935 aa11.97□□□□□ -0.49
CHD8-204ENST00000553622 MYO5AQ9Y4I1 1855 aaKnown RBP11.97□□□□□ -0.49
CHD8-204ENST00000553622 LTBP1Q14766 1721 aa11.97□□□□□ -0.49
CHD8-204ENST00000553622 C6orf229H3BNL8 230 aa11.96□□□□□ -0.49
CHD8-204ENST00000553622 C21orf2O43822 256 aa11.96□□□□□ -0.49
CHD8-204ENST00000553622 DALRD3Q5D0E6 543 aaKnown RBP11.96□□□□□ -0.49
CHD8-204ENST00000553622 PLEKHM2Q8IWE5 1019 aa11.96□□□□□ -0.49
CHD8-204ENST00000553622 NLGN2Q8NFZ4 835 aa11.96□□□□□ -0.49
CHD8-204ENST00000553622 LPIN2Q92539 896 aa11.96□□□□□ -0.49
CHD8-204ENST00000553622 XAGE2Q96GT9 111 aa11.96□□□□□ -0.49
CHD8-204ENST00000553622 FHDC1Q9C0D6 1143 aaPredicted RBP11.96□□□□□ -0.49
CHD8-204ENST00000553622 GPR108Q9NPR9 543 aa11.96□□□□□ -0.49
CHD8-204ENST00000553622 DBNLQ9UJU6 430 aaKnown RBP11.96□□□□□ -0.49
CHD8-204ENST00000553622 GGA1Q9UJY5 639 aa11.96□□□□□ -0.49
CHD8-204ENST00000553622 AKAP11Q9UKA4 1901 aa11.96□□□□□ -0.5
CHD8-204ENST00000553622 ZNF804BA4D1E1 1349 aa11.95□□□□□ -0.5
CHD8-204ENST00000553622 WTIPA6NIX2 430 aaPredicted RBP11.95□□□□□ -0.5
CHD8-204ENST00000553622 KCNA3P22001 575 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms