RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 MAPK8IP2Q13387 824 aaPredicted RBP18.53■□□□□ 0.56
NEDD1-205ENST00000553609 NEUROD2Q15784 382 aa18.53■□□□□ 0.56
NEDD1-205ENST00000553609 SAGE1Q9NXZ1 904 aa18.53■□□□□ 0.56
NEDD1-205ENST00000553609 DBF4Q9UBU7 674 aaPredicted RBP18.53■□□□□ 0.56
NEDD1-205ENST00000553609 POLR2AP24928 1970 aaKnown RBP18.52■□□□□ 0.56
NEDD1-205ENST00000553609 VIL1P09327 827 aaKnown RBP18.52■□□□□ 0.56
NEDD1-205ENST00000553609 RALBP1Q15311 655 aa18.52■□□□□ 0.56
NEDD1-205ENST00000553609 RTL5Q5HYW3 569 aaPredicted RBP18.52■□□□□ 0.56
NEDD1-205ENST00000553609 PODXL2Q9NZ53 605 aa18.52■□□□□ 0.56
NEDD1-205ENST00000553609 PDE4DIPQ5VU43 2346 aa18.51■□□□□ 0.55
NEDD1-205ENST00000553609 IRS4O14654 1257 aaPredicted RBP18.51■□□□□ 0.55
NEDD1-205ENST00000553609 RPS8P62241 208 aaKnown RBP18.51■□□□□ 0.55
NEDD1-205ENST00000553609 KIF23Q02241 960 aaPredicted RBP18.51■□□□□ 0.55
NEDD1-205ENST00000553609 KIF4BQ2VIQ3 1234 aa18.51■□□□□ 0.55
NEDD1-205ENST00000553609 RBM26Q5T8P6 1007 aaKnown RBP18.51■□□□□ 0.55
NEDD1-205ENST00000553609 C2orf69Q8N8R5 385 aa18.51■□□□□ 0.55
NEDD1-205ENST00000553609 DCPSQ96C86 337 aaKnown RBP18.51■□□□□ 0.55
NEDD1-205ENST00000553609 EYA3Q99504 573 aa18.51■□□□□ 0.55
NEDD1-205ENST00000553609 GGA3Q9NZ52 723 aa18.51■□□□□ 0.55
NEDD1-205ENST00000553609 SLC10A3P09131 477 aa18.5■□□□□ 0.55
NEDD1-205ENST00000553609 CCDC102AQ96A19 550 aa18.5■□□□□ 0.55
NEDD1-205ENST00000553609 CFAP44Q96MT7 982 aa18.5■□□□□ 0.55
NEDD1-205ENST00000553609 SEC31BQ9NQW1 1179 aa18.5■□□□□ 0.55
NEDD1-205ENST00000553609 LAS1LQ9Y4W2 734 aaKnown RBP18.5■□□□□ 0.55
NEDD1-205ENST00000553609 ZNF280AP59817 542 aaPredicted RBP18.49■□□□□ 0.55
NEDD1-205ENST00000553609 DUSP27Q5VZP5 1158 aa18.49■□□□□ 0.55
NEDD1-205ENST00000553609 RUNDC1Q96C34 613 aa18.49■□□□□ 0.55
NEDD1-205ENST00000553609 HYPKQ9NX55 129 aa18.49■□□□□ 0.55
NEDD1-205ENST00000553609 RNF186Q9NXI6 227 aa18.49■□□□□ 0.55
NEDD1-205ENST00000553609 ZNF157P51786 506 aaPredicted RBP18.48■□□□□ 0.55
NEDD1-205ENST00000553609 ZBTB38Q8NAP3 1195 aaPredicted RBP18.48■□□□□ 0.55
NEDD1-205ENST00000553609 CDCA5Q96FF9 252 aa18.48■□□□□ 0.55
NEDD1-205ENST00000553609 TRPA1O75762 1119 aa18.47■□□□□ 0.55
NEDD1-205ENST00000553609 SULF1Q8IWU6 871 aa18.47■□□□□ 0.55
NEDD1-205ENST00000553609 CSRNP1Q96S65 589 aa18.47■□□□□ 0.55
NEDD1-205ENST00000553609 GMLQ99445 158 aa18.47■□□□□ 0.55
NEDD1-205ENST00000553609 ZC3H12CQ9C0D7 883 aaKnown RBP18.47■□□□□ 0.55
NEDD1-205ENST00000553609 PSME4Q14997 1843 aa18.46■□□□□ 0.55
NEDD1-205ENST00000553609 UFL1O94874 794 aa18.46■□□□□ 0.55
NEDD1-205ENST00000553609 ZNF853P0CG23 659 aa18.46■□□□□ 0.55
NEDD1-205ENST00000553609 RSBN1LQ6PCB5 846 aaPredicted RBP18.46■□□□□ 0.55
NEDD1-205ENST00000553609 MBIPQ9NS73 344 aa18.46■□□□□ 0.55
NEDD1-205ENST00000553609 MYBBP1AQ9BQG0 1328 aaKnown RBP18.46■□□□□ 0.55
NEDD1-205ENST00000553609 ANGEL2Q5VTE6 544 aaKnown RBP18.45■□□□□ 0.54
NEDD1-205ENST00000553609 RASAL3Q86YV0 1011 aa18.45■□□□□ 0.54
NEDD1-205ENST00000553609 AGBL3Q8NEM8 1001 aa18.45■□□□□ 0.54
NEDD1-205ENST00000553609 PHAXQ9H814 394 aaKnown RBP18.45■□□□□ 0.54
NEDD1-205ENST00000553609 GGA1Q9UJY5 639 aa18.45■□□□□ 0.54
NEDD1-205ENST00000553609 PAPPA2Q9BXP8 1791 aa18.45■□□□□ 0.54
NEDD1-205ENST00000553609 SCARF1Q14162 830 aa18.44■□□□□ 0.54
NEDD1-205ENST00000553609 ANKIB1Q9P2G1 1089 aa18.44■□□□□ 0.54
NEDD1-205ENST00000553609 ADAMTS8Q9UP79 889 aa18.44■□□□□ 0.54
NEDD1-205ENST00000553609 PCCAP05165 728 aaPredicted RBP18.43■□□□□ 0.54
NEDD1-205ENST00000553609 RIC3Q7Z5B4 369 aa18.43■□□□□ 0.54
NEDD1-205ENST00000553609 ZNF646O15015 1829 aaPredicted RBP18.42■□□□□ 0.54
NEDD1-205ENST00000553609 WTIPA6NIX2 430 aaPredicted RBP18.42■□□□□ 0.54
NEDD1-205ENST00000553609 SOX10P56693 466 aa18.42■□□□□ 0.54
NEDD1-205ENST00000553609 GOLGA2Q08379 1002 aa18.42■□□□□ 0.54
NEDD1-205ENST00000553609 CCDC191Q8NCU4 936 aa18.42■□□□□ 0.54
NEDD1-205ENST00000553609 MYD88Q99836 296 aa18.42■□□□□ 0.54
NEDD1-205ENST00000553609 AKAP11Q9UKA4 1901 aa18.42■□□□□ 0.54
NEDD1-205ENST00000553609 PITPNM2Q9BZ72 1349 aa18.42■□□□□ 0.54
NEDD1-205ENST00000553609 PDE8AO60658 829 aa18.41■□□□□ 0.54
NEDD1-205ENST00000553609 FKBP1BP68106 108 aa18.41■□□□□ 0.54
NEDD1-205ENST00000553609 CCDC152Q4G0S7 254 aa18.41■□□□□ 0.54
NEDD1-205ENST00000553609 CTU1Q7Z7A3 348 aaKnown RBP18.41■□□□□ 0.54
NEDD1-205ENST00000553609 JARID2Q92833 1246 aaPredicted RBP18.41■□□□□ 0.54
NEDD1-205ENST00000553609 CCDC85AQ96PX6 553 aaPredicted RBP18.41■□□□□ 0.54
NEDD1-205ENST00000553609 MYOZ2Q9NPC6 264 aa18.41■□□□□ 0.54
NEDD1-205ENST00000553609 XDHP47989 1333 aa18.41■□□□□ 0.54
NEDD1-205ENST00000553609 USP17L8P0C7I0 530 aa18.4■□□□□ 0.54
NEDD1-205ENST00000553609 WDR43Q15061 677 aaKnown RBP eCLIP18.4■□□□□ 0.54
NEDD1-205ENST00000553609 MOB2Q70IA6 237 aa18.4■□□□□ 0.54
NEDD1-205ENST00000553609 HSP90B1P14625 803 aaKnown RBP18.39■□□□□ 0.53
NEDD1-205ENST00000553609 PODNQ7Z5L7 613 aa18.39■□□□□ 0.53
NEDD1-205ENST00000553609 REM2Q8IYK8 340 aaPredicted RBP18.39■□□□□ 0.53
NEDD1-205ENST00000553609 IFT57Q9NWB7 429 aa18.39■□□□□ 0.53
NEDD1-205ENST00000553609 CWC25Q9NXE8 425 aaPredicted RBP18.39■□□□□ 0.53
NEDD1-205ENST00000553609 SCAF8Q9UPN6 1271 aaKnown RBP18.39■□□□□ 0.53
NEDD1-205ENST00000553609 USP17L3A6NCW0 530 aa18.38■□□□□ 0.53
NEDD1-205ENST00000553609 USP17L4A6NCW7 530 aa18.38■□□□□ 0.53
NEDD1-205ENST00000553609 G3V3G9 751 aa18.38■□□□□ 0.53
NEDD1-205ENST00000553609 DCAF8Q5TAQ9 597 aa18.38■□□□□ 0.53
NEDD1-205ENST00000553609 USP17L1Q7RTZ2 530 aa18.38■□□□□ 0.53
NEDD1-205ENST00000553609 METTL22Q9BUU2 404 aaPredicted RBP18.38■□□□□ 0.53
NEDD1-205ENST00000553609 MED23Q9ULK4 1368 aa18.38■□□□□ 0.53
NEDD1-205ENST00000553609 ELL2O00472 640 aaPredicted RBP18.37■□□□□ 0.53
NEDD1-205ENST00000553609 ATP2B4P23634 1241 aa18.37■□□□□ 0.53
NEDD1-205ENST00000553609 NBPF9Q3BBW0 867 aa18.37■□□□□ 0.53
NEDD1-205ENST00000553609 DACT2Q5SW24 774 aa18.37■□□□□ 0.53
NEDD1-205ENST00000553609 ANKRD18AQ8IVF6 992 aa18.37■□□□□ 0.53
NEDD1-205ENST00000553609 C8orf58Q8NAV2 365 aa18.37■□□□□ 0.53
NEDD1-205ENST00000553609 IGKV5-2P06315 115 aa18.36■□□□□ 0.53
NEDD1-205ENST00000553609 HTTP42858 3142 aa18.36■□□□□ 0.53
NEDD1-205ENST00000553609 CTSWP56202 376 aa18.36■□□□□ 0.53
NEDD1-205ENST00000553609 PRAMEF18Q5VWM3 479 aa18.36■□□□□ 0.53
NEDD1-205ENST00000553609 MXD3Q9BW11 206 aa18.36■□□□□ 0.53
NEDD1-205ENST00000553609 PCDH10Q9P2E7 1040 aa18.36■□□□□ 0.53
NEDD1-205ENST00000553609 HPS5Q9UPZ3 1129 aa18.36■□□□□ 0.53
NEDD1-205ENST00000553609 UBE2Q2LH0YL09 131 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms