RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PSMD14O00487 310 aa23.26■■□□□ 1.31
SHMT2-206ENST00000553529 ECE2O60344 883 aa23.26■■□□□ 1.31
SHMT2-206ENST00000553529 EGFRP00533 1210 aa23.26■■□□□ 1.31
SHMT2-206ENST00000553529 DLK2Q6UY11 383 aa23.26■■□□□ 1.31
SHMT2-206ENST00000553529 ANKRD18AQ8IVF6 992 aa23.26■■□□□ 1.31
SHMT2-206ENST00000553529 LINS1Q8NG48 757 aa23.26■■□□□ 1.31
SHMT2-206ENST00000553529 TRPM4Q8TD43 1214 aa23.26■■□□□ 1.31
SHMT2-206ENST00000553529 CHMP4AQ9BY43 222 aa23.26■■□□□ 1.31
SHMT2-206ENST00000553529 ANKIB1Q9P2G1 1089 aa23.26■■□□□ 1.31
SHMT2-206ENST00000553529 TRAF5O00463 557 aa23.25■■□□□ 1.31
SHMT2-206ENST00000553529 KLRK1P26718 216 aa23.25■■□□□ 1.31
SHMT2-206ENST00000553529 LMOD1P29536 600 aaPredicted RBP23.25■■□□□ 1.31
SHMT2-206ENST00000553529 HIRAP54198 1017 aaPredicted RBP23.25■■□□□ 1.31
SHMT2-206ENST00000553529 SLFN5Q08AF3 891 aa23.25■■□□□ 1.31
SHMT2-206ENST00000553529 MKRN1Q9UHC7 482 aaKnown RBP23.25■■□□□ 1.31
SHMT2-206ENST00000553529 SLC4A10Q6U841 1118 aa23.24■■□□□ 1.31
SHMT2-206ENST00000553529 CNTROBQ8N137 903 aa23.24■■□□□ 1.31
SHMT2-206ENST00000553529 MRPL50Q8N5N7 158 aaKnown RBP23.24■■□□□ 1.31
SHMT2-206ENST00000553529 VPS33BQ9H267 617 aa23.24■■□□□ 1.31
SHMT2-206ENST00000553529 SNAP23O00161 211 aa23.23■■□□□ 1.31
SHMT2-206ENST00000553529 FOXO4P98177 505 aa23.23■■□□□ 1.31
SHMT2-206ENST00000553529 PODXL2Q9NZ53 605 aa23.23■■□□□ 1.31
SHMT2-206ENST00000553529 A0A1B0GUL6 1792 aa23.22■■□□□ 1.31
SHMT2-206ENST00000553529 ITGA6P23229 1130 aa23.22■■□□□ 1.31
SHMT2-206ENST00000553529 PNMA8AQ86V59 439 aaPredicted RBP23.22■■□□□ 1.31
SHMT2-206ENST00000553529 SSH1Q8WYL5 1049 aa23.22■■□□□ 1.31
SHMT2-206ENST00000553529 GGA1Q9UJY5 639 aa23.22■■□□□ 1.31
SHMT2-206ENST00000553529 MINPP1Q9UNW1 487 aa23.22■■□□□ 1.31
SHMT2-206ENST00000553529 ZNF646O15015 1829 aaPredicted RBP23.22■■□□□ 1.31
SHMT2-206ENST00000553529 TXNRD3Q86VQ6 643 aa23.21■■□□□ 1.31
SHMT2-206ENST00000553529 PLA2G12BQ9BX93 195 aa23.21■■□□□ 1.31
SHMT2-206ENST00000553529 CSF1RP07333 972 aa23.2■■□□□ 1.3
SHMT2-206ENST00000553529 SAMD7Q7Z3H4 446 aa23.2■■□□□ 1.3
SHMT2-206ENST00000553529 MICALL2Q8IY33 904 aa23.2■■□□□ 1.3
SHMT2-206ENST00000553529 MIER1Q8N108 512 aa23.2■■□□□ 1.3
SHMT2-206ENST00000553529 MXD3Q9BW11 206 aa23.2■■□□□ 1.3
SHMT2-206ENST00000553529 XDHP47989 1333 aa23.19■■□□□ 1.3
SHMT2-206ENST00000553529 E9PSI1 815 aa23.19■■□□□ 1.3
SHMT2-206ENST00000553529 CCER2I3L3R5 266 aa23.19■■□□□ 1.3
SHMT2-206ENST00000553529 HSP90B1P14625 803 aaKnown RBP23.19■■□□□ 1.3
SHMT2-206ENST00000553529 JMYQ8N9B5 988 aa23.19■■□□□ 1.3
SHMT2-206ENST00000553529 ZNF594Q96JF6 807 aaPredicted RBP23.19■■□□□ 1.3
SHMT2-206ENST00000553529 CDC5LQ99459 802 aaKnown RBP23.19■■□□□ 1.3
SHMT2-206ENST00000553529 CREBZFQ9NS37 354 aa23.19■■□□□ 1.3
SHMT2-206ENST00000553529 ADARB2Q9NS39 739 aaKnown RBP23.19■■□□□ 1.3
SHMT2-206ENST00000553529 CNOT7Q9UIV1 285 aaKnown RBP23.19■■□□□ 1.3
SHMT2-206ENST00000553529 ASTN2O75129 1339 aaPredicted RBP23.18■■□□□ 1.3
SHMT2-206ENST00000553529 KAZALD1Q96I82 304 aa23.18■■□□□ 1.3
SHMT2-206ENST00000553529 EYA3Q99504 573 aa23.18■■□□□ 1.3
SHMT2-206ENST00000553529 GLIS2Q9BZE0 524 aaPredicted RBP23.18■■□□□ 1.3
SHMT2-206ENST00000553529 ZC3H12CQ9C0D7 883 aaKnown RBP23.18■■□□□ 1.3
SHMT2-206ENST00000553529 BSDC1Q9NW68 430 aaPredicted RBP23.18■■□□□ 1.3
SHMT2-206ENST00000553529 CHMP3Q9Y3E7 222 aa23.18■■□□□ 1.3
SHMT2-206ENST00000553529 TNIP1Q15025 636 aa23.17■■□□□ 1.3
SHMT2-206ENST00000553529 TBC1D10BQ4KMP7 808 aaPredicted RBP23.17■■□□□ 1.3
SHMT2-206ENST00000553529 USP50Q70EL3 339 aaPredicted RBP23.17■■□□□ 1.3
SHMT2-206ENST00000553529 HELBQ8NG08 1087 aaPredicted RBP23.17■■□□□ 1.3
SHMT2-206ENST00000553529 SUCLG2Q96I99 432 aa23.17■■□□□ 1.3
SHMT2-206ENST00000553529 PSME4Q14997 1843 aa23.17■■□□□ 1.3
SHMT2-206ENST00000553529 GRM8O00222 908 aa23.16■■□□□ 1.3
SHMT2-206ENST00000553529 NBPF7P0C2Y1 421 aaPredicted RBP23.16■■□□□ 1.3
SHMT2-206ENST00000553529 RBM26Q5T8P6 1007 aaKnown RBP23.16■■□□□ 1.3
SHMT2-206ENST00000553529 TAF5LO75529 589 aa23.15■■□□□ 1.3
SHMT2-206ENST00000553529 CCT4P50991 539 aaKnown RBP23.15■■□□□ 1.3
SHMT2-206ENST00000553529 LMBR1LQ6UX01 489 aa23.15■■□□□ 1.3
SHMT2-206ENST00000553529 TRMT2AQ8IZ69 625 aaKnown RBP23.15■■□□□ 1.3
SHMT2-206ENST00000553529 TMEM88BA6NKF7 163 aa23.14■■□□□ 1.29
SHMT2-206ENST00000553529 ATP2B4P23634 1241 aa23.14■■□□□ 1.29
SHMT2-206ENST00000553529 IGHMBP2P38935 993 aaKnown RBP23.14■■□□□ 1.29
SHMT2-206ENST00000553529 CST9Q5W186 159 aa23.14■■□□□ 1.29
SHMT2-206ENST00000553529 CNTNAP1P78357 1384 aa23.14■■□□□ 1.29
SHMT2-206ENST00000553529 PCNTO95613 3336 aa23.13■■□□□ 1.29
SHMT2-206ENST00000553529 CHRNDQ07001 517 aa23.13■■□□□ 1.29
SHMT2-206ENST00000553529 SRCIN1Q9C0H9 1055 aa23.13■■□□□ 1.29
SHMT2-206ENST00000553529 SCAF8Q9UPN6 1271 aaKnown RBP23.13■■□□□ 1.29
SHMT2-206ENST00000553529 ANKRD18BA2A2Z9 1011 aa23.11■■□□□ 1.29
SHMT2-206ENST00000553529 G3V3G9 751 aa23.11■■□□□ 1.29
SHMT2-206ENST00000553529 VIL1P09327 827 aaKnown RBP23.11■■□□□ 1.29
SHMT2-206ENST00000553529 VEGFBP49765 207 aa23.11■■□□□ 1.29
SHMT2-206ENST00000553529 DCAF8Q5TAQ9 597 aa23.11■■□□□ 1.29
SHMT2-206ENST00000553529 C9orf78Q9NZ63 289 aaPredicted RBP23.11■■□□□ 1.29
SHMT2-206ENST00000553529 MED23Q9ULK4 1368 aa23.11■■□□□ 1.29
SHMT2-206ENST00000553529 TRPM7Q96QT4 1865 aa23.11■■□□□ 1.29
SHMT2-206ENST00000553529 IRS2Q9Y4H2 1338 aa23.1■■□□□ 1.29
SHMT2-206ENST00000553529 ALDH1L1O75891 902 aa23.1■■□□□ 1.29
SHMT2-206ENST00000553529 HSPA1AP0DMV8 641 aaKnown RBP23.1■■□□□ 1.29
SHMT2-206ENST00000553529 HSPA1BP0DMV9 641 aaKnown RBP23.1■■□□□ 1.29
SHMT2-206ENST00000553529 FBXW7Q969H0 707 aa23.1■■□□□ 1.29
SHMT2-206ENST00000553529 MPHOSPH8Q99549 860 aa23.1■■□□□ 1.29
SHMT2-206ENST00000553529 PUS3Q9BZE2 481 aaKnown RBP23.1■■□□□ 1.29
SHMT2-206ENST00000553529 ZNF804BA4D1E1 1349 aa23.09■■□□□ 1.29
SHMT2-206ENST00000553529 ADM5C9JUS6 153 aa23.09■■□□□ 1.29
SHMT2-206ENST00000553529 DIEXFQ68CQ4 756 aaKnown RBP23.09■■□□□ 1.29
SHMT2-206ENST00000553529 USP48Q86UV5 1035 aa23.09■■□□□ 1.29
SHMT2-206ENST00000553529 ZNF408Q9H9D4 720 aa23.09■■□□□ 1.29
SHMT2-206ENST00000553529 SMC4Q9NTJ3 1288 aa23.09■■□□□ 1.29
SHMT2-206ENST00000553529 ABT1Q9ULW3 272 aaKnown RBP23.09■■□□□ 1.29
SHMT2-206ENST00000553529 POLR2AP24928 1970 aaKnown RBP23.09■■□□□ 1.29
SHMT2-206ENST00000553529 H7C1D1 291 aa23.08■■□□□ 1.29
SHMT2-206ENST00000553529 IFIT5Q13325 482 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms