RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 A0A1W2PP55 124 aa8.48□□□□□ -1.05
SYNE2-210ENST00000553455 C2CD2LO14523 706 aa8.48□□□□□ -1.05
SYNE2-210ENST00000553455 PSAPP07602 524 aa8.48□□□□□ -1.05
SYNE2-210ENST00000553455 EDN3P14138 238 aa8.48□□□□□ -1.05
SYNE2-210ENST00000553455 KIAA0319Q5VV43 1072 aa8.48□□□□□ -1.05
SYNE2-210ENST00000553455 NXPE4Q6UWF7 544 aa8.48□□□□□ -1.05
SYNE2-210ENST00000553455 DHX32Q7L7V1 743 aaKnown RBP8.48□□□□□ -1.05
SYNE2-210ENST00000553455 GLIS3Q8NEA6 775 aa8.48□□□□□ -1.05
SYNE2-210ENST00000553455 CNTNAP3BQ96NU0 1288 aa8.48□□□□□ -1.05
SYNE2-210ENST00000553455 BCO2Q9BYV7 579 aa8.48□□□□□ -1.05
SYNE2-210ENST00000553455 CNTNAP3Q9BZ76 1288 aa8.48□□□□□ -1.05
SYNE2-210ENST00000553455 GADD45BO75293 160 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-210ENST00000553455 ACPPP15309 386 aa8.47□□□□□ -1.05
SYNE2-210ENST00000553455 FANCCQ00597 558 aa8.47□□□□□ -1.05
SYNE2-210ENST00000553455 PLAURQ03405 335 aa8.47□□□□□ -1.05
SYNE2-210ENST00000553455 GAS6Q14393 721 aa8.47□□□□□ -1.05
SYNE2-210ENST00000553455 FOXR1Q6PIV2 292 aa8.47□□□□□ -1.05
SYNE2-210ENST00000553455 METTL16Q86W50 562 aaKnown RBP8.47□□□□□ -1.05
SYNE2-210ENST00000553455 USP17L7P0C7H9 530 aa8.46□□□□□ -1.06
SYNE2-210ENST00000553455 NRLP54845 237 aa8.46□□□□□ -1.06
SYNE2-210ENST00000553455 NSUN5Q96P11 429 aaKnown RBP8.46□□□□□ -1.06
SYNE2-210ENST00000553455 SRCIN1Q9C0H9 1055 aa8.46□□□□□ -1.06
SYNE2-210ENST00000553455 METTL5Q9NRN9 209 aaKnown RBP8.46□□□□□ -1.06
SYNE2-210ENST00000553455 FAM8A1Q9UBU6 413 aa8.46□□□□□ -1.06
SYNE2-210ENST00000553455 ZBTB42B2RXF5 422 aa8.45□□□□□ -1.06
SYNE2-210ENST00000553455 GPLD1P80108 840 aa8.45□□□□□ -1.06
SYNE2-210ENST00000553455 HYAL2Q12891 473 aa8.45□□□□□ -1.06
SYNE2-210ENST00000553455 ZNF468Q5VIY5 522 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-210ENST00000553455 PRPF40BQ6NWY9 871 aaKnown RBP8.45□□□□□ -1.06
SYNE2-210ENST00000553455 SYT9Q86SS6 491 aa8.45□□□□□ -1.06
SYNE2-210ENST00000553455 CEP120Q8N960 986 aa8.45□□□□□ -1.06
SYNE2-210ENST00000553455 TRPM4Q8TD43 1214 aa8.45□□□□□ -1.06
SYNE2-210ENST00000553455 ZKSCAN3Q9BRR0 538 aa8.45□□□□□ -1.06
SYNE2-210ENST00000553455 RAD51AP2Q09MP3 1159 aa8.44□□□□□ -1.06
SYNE2-210ENST00000553455 NEUROD1Q13562 356 aa8.44□□□□□ -1.06
SYNE2-210ENST00000553455 MEI1Q5TIA1 1274 aa8.44□□□□□ -1.06
SYNE2-210ENST00000553455 C9orf131Q5VYM1 1079 aa8.44□□□□□ -1.06
SYNE2-210ENST00000553455 NCAPG2Q86XI2 1143 aa8.44□□□□□ -1.06
SYNE2-210ENST00000553455 C3orf58Q8NDZ4 430 aa8.44□□□□□ -1.06
SYNE2-210ENST00000553455 TCF12Q99081 682 aa8.44□□□□□ -1.06
SYNE2-210ENST00000553455 EHD4Q9H223 541 aa8.44□□□□□ -1.06
SYNE2-210ENST00000553455 ABCB6Q9NP58 842 aa8.44□□□□□ -1.06
SYNE2-210ENST00000553455 NXF1Q9UBU9 619 aaKnown RBP8.44□□□□□ -1.06
SYNE2-210ENST00000553455 BMP4P12644 408 aa8.43□□□□□ -1.06
SYNE2-210ENST00000553455 MLLT1Q03111 559 aaPredicted RBP8.43□□□□□ -1.06
SYNE2-210ENST00000553455 GPR161Q8N6U8 529 aaKnown RBP8.43□□□□□ -1.06
SYNE2-210ENST00000553455 DZANK1Q9NVP4 752 aa8.43□□□□□ -1.06
SYNE2-210ENST00000553455 KLF15Q9UIH9 416 aa8.43□□□□□ -1.06
SYNE2-210ENST00000553455 PRR12Q9ULL5 1215 aa8.43□□□□□ -1.06
SYNE2-210ENST00000553455 H3BM21 787 aa8.42□□□□□ -1.06
SYNE2-210ENST00000553455 NFKBIEO00221 500 aa8.42□□□□□ -1.06
SYNE2-210ENST00000553455 SIN3BO75182 1162 aa8.42□□□□□ -1.06
SYNE2-210ENST00000553455 TRPA1O75762 1119 aa8.42□□□□□ -1.06
SYNE2-210ENST00000553455 MX2P20592 715 aa8.42□□□□□ -1.06
SYNE2-210ENST00000553455 ZNF76P36508 570 aa8.42□□□□□ -1.06
SYNE2-210ENST00000553455 PCBP4P57723 403 aaKnown RBP8.42□□□□□ -1.06
SYNE2-210ENST00000553455 CCNJLQ8IV13 435 aa8.42□□□□□ -1.06
SYNE2-210ENST00000553455 HHIPQ96QV1 700 aa8.42□□□□□ -1.06
SYNE2-210ENST00000553455 OSMRQ99650 979 aa8.42□□□□□ -1.06
SYNE2-210ENST00000553455 MDFIQ99750 246 aa8.42□□□□□ -1.06
SYNE2-210ENST00000553455 LIN7BQ9HAP6 207 aa8.42□□□□□ -1.06
SYNE2-210ENST00000553455 AVENQ9NQS1 362 aaPredicted RBP8.42□□□□□ -1.06
SYNE2-210ENST00000553455 DNAJB12Q9NXW2 375 aaKnown RBP8.42□□□□□ -1.06
SYNE2-210ENST00000553455 TRAK1Q9UPV9 953 aa8.42□□□□□ -1.06
SYNE2-210ENST00000553455 USP31Q70CQ4 1352 aa8.42□□□□□ -1.06
SYNE2-210ENST00000553455 LOC102724428A0A0B4J2F2 783 aa8.41□□□□□ -1.06
SYNE2-210ENST00000553455 J3QW42 95 aa8.41□□□□□ -1.06
SYNE2-210ENST00000553455 SIK1P57059 783 aa8.41□□□□□ -1.06
SYNE2-210ENST00000553455 NT5DC4Q86YG4 428 aa8.41□□□□□ -1.06
SYNE2-210ENST00000553455 TNFRSF25Q93038 417 aa8.41□□□□□ -1.06
SYNE2-210ENST00000553455 RNF34Q969K3 372 aa8.41□□□□□ -1.06
SYNE2-210ENST00000553455 VSIG8P0DPA2 414 aa8.4□□□□□ -1.06
SYNE2-210ENST00000553455 ERCC5P28715 1186 aaPredicted RBP8.4□□□□□ -1.06
SYNE2-210ENST00000553455 GSTT1P30711 240 aa8.4□□□□□ -1.06
SYNE2-210ENST00000553455 ST13P50502 369 aaKnown RBP8.4□□□□□ -1.06
SYNE2-210ENST00000553455 HFE2Q6ZVN8 426 aa8.4□□□□□ -1.06
SYNE2-210ENST00000553455 NPAS3Q8IXF0 933 aa8.4□□□□□ -1.06
SYNE2-210ENST00000553455 UBE2OQ9C0C9 1292 aaKnown RBP8.4□□□□□ -1.06
SYNE2-210ENST00000553455 BHLHE41Q9C0J9 482 aaPredicted RBP8.4□□□□□ -1.06
SYNE2-210ENST00000553455 IGFLR1Q9H665 355 aa8.4□□□□□ -1.06
SYNE2-210ENST00000553455 TMEM238LA0A1B0GVL6 79 aa8.39□□□□□ -1.07
SYNE2-210ENST00000553455 ARAFP10398 606 aa8.39□□□□□ -1.07
SYNE2-210ENST00000553455 GRIA4P48058 902 aa8.39□□□□□ -1.07
SYNE2-210ENST00000553455 FCGRTP55899 365 aa8.39□□□□□ -1.07
SYNE2-210ENST00000553455 ATP11AP98196 1134 aa8.39□□□□□ -1.07
SYNE2-210ENST00000553455 PTPN12Q05209 780 aaKnown RBP8.39□□□□□ -1.07
SYNE2-210ENST00000553455 TAF1CQ15572 869 aaPredicted RBP8.39□□□□□ -1.07
SYNE2-210ENST00000553455 TMEM102Q8N9M5 508 aaPredicted RBP8.39□□□□□ -1.07
SYNE2-210ENST00000553455 C8orf37Q96NL8 207 aa8.39□□□□□ -1.07
SYNE2-210ENST00000553455 OXCT2Q9BYC2 517 aaPredicted RBP8.39□□□□□ -1.07
SYNE2-210ENST00000553455 RASSF4Q9H2L5 321 aa8.39□□□□□ -1.07
SYNE2-210ENST00000553455 MBIPQ9NS73 344 aa8.39□□□□□ -1.07
SYNE2-210ENST00000553455 NAGPAQ9UK23 515 aa8.39□□□□□ -1.07
SYNE2-210ENST00000553455 METTL12A8MUP2 240 aa8.38□□□□□ -1.07
SYNE2-210ENST00000553455 TBC1D8BQ0IIM8 1120 aa8.38□□□□□ -1.07
SYNE2-210ENST00000553455 RNFT1Q5M7Z0 435 aa8.38□□□□□ -1.07
SYNE2-210ENST00000553455 FCHSD1Q86WN1 690 aa8.38□□□□□ -1.07
SYNE2-210ENST00000553455 NXPE3Q969Y0 559 aa8.38□□□□□ -1.07
SYNE2-210ENST00000553455 SPACA7Q96KW9 195 aa8.38□□□□□ -1.07
SYNE2-210ENST00000553455 PBX4Q9BYU1 374 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms