RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 IGHMBP2P38935 993 aaKnown RBP18.52■□□□□ 0.56
MTHFD1-204ENST00000553405 CC2D2BQ6DHV5 1058 aa18.52■□□□□ 0.56
MTHFD1-204ENST00000553405 PODXL2Q9NZ53 605 aa18.52■□□□□ 0.56
MTHFD1-204ENST00000553405 ZNF219Q9P2Y4 722 aaPredicted RBP18.52■□□□□ 0.56
MTHFD1-204ENST00000553405 WTIPA6NIX2 430 aaPredicted RBP18.51■□□□□ 0.55
MTHFD1-204ENST00000553405 EYA2O00167 538 aa18.51■□□□□ 0.55
MTHFD1-204ENST00000553405 GPSM2P81274 684 aa18.51■□□□□ 0.55
MTHFD1-204ENST00000553405 AAMPQ13685 434 aa18.51■□□□□ 0.55
MTHFD1-204ENST00000553405 CCDC93Q567U6 631 aa18.51■□□□□ 0.55
MTHFD1-204ENST00000553405 VGLL2Q8N8G2 317 aa18.51■□□□□ 0.55
MTHFD1-204ENST00000553405 RTFDC1Q9BY42 306 aaPredicted RBP18.51■□□□□ 0.55
MTHFD1-204ENST00000553405 NOP58Q9Y2X3 529 aaKnown RBP18.51■□□□□ 0.55
MTHFD1-204ENST00000553405 LTBP3Q9NS15 1303 aa18.5■□□□□ 0.55
MTHFD1-204ENST00000553405 CIAO1O76071 339 aa18.5■□□□□ 0.55
MTHFD1-204ENST00000553405 SOGA3Q5TF21 947 aa18.5■□□□□ 0.55
MTHFD1-204ENST00000553405 LDHAL6AQ6ZMR3 332 aa18.5■□□□□ 0.55
MTHFD1-204ENST00000553405 FBXO3Q9UK99 471 aa18.5■□□□□ 0.55
MTHFD1-204ENST00000553405 COL4A5P29400 1685 aa18.5■□□□□ 0.55
MTHFD1-204ENST00000553405 IRS2Q9Y4H2 1338 aa18.49■□□□□ 0.55
MTHFD1-204ENST00000553405 CHRNDQ07001 517 aa18.49■□□□□ 0.55
MTHFD1-204ENST00000553405 GPR162Q16538 588 aa18.49■□□□□ 0.55
MTHFD1-204ENST00000553405 PSMD1Q99460 953 aa18.49■□□□□ 0.55
MTHFD1-204ENST00000553405 MPHOSPH8Q99549 860 aa18.49■□□□□ 0.55
MTHFD1-204ENST00000553405 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.49■□□□□ 0.55
MTHFD1-204ENST00000553405 SBF1O95248 1867 aa18.49■□□□□ 0.55
MTHFD1-204ENST00000553405 GRIPAP1Q4V328 841 aa18.48■□□□□ 0.55
MTHFD1-204ENST00000553405 RTKN2Q8IZC4 609 aa18.48■□□□□ 0.55
MTHFD1-204ENST00000553405 POLLQ9UGP5 575 aa18.48■□□□□ 0.55
MTHFD1-204ENST00000553405 XDHP47989 1333 aa18.48■□□□□ 0.55
MTHFD1-204ENST00000553405 GRIN3BO60391 1043 aa18.47■□□□□ 0.55
MTHFD1-204ENST00000553405 TAF7LQ5H9L4 462 aa18.47■□□□□ 0.55
MTHFD1-204ENST00000553405 PELP1Q8IZL8 1130 aaKnown RBP18.47■□□□□ 0.55
MTHFD1-204ENST00000553405 TBC1D16Q8TBP0 767 aa18.47■□□□□ 0.55
MTHFD1-204ENST00000553405 SIL1Q9H173 461 aa18.47■□□□□ 0.55
MTHFD1-204ENST00000553405 CNNM1Q9NRU3 951 aa18.47■□□□□ 0.55
MTHFD1-204ENST00000553405 SNAP23O00161 211 aa18.46■□□□□ 0.55
MTHFD1-204ENST00000553405 SASH1O94885 1247 aa18.46■□□□□ 0.55
MTHFD1-204ENST00000553405 FKBP4Q02790 459 aaKnown RBP eCLIP18.46■□□□□ 0.55
MTHFD1-204ENST00000553405 RASSF7Q02833 373 aa18.46■□□□□ 0.55
MTHFD1-204ENST00000553405 MPNDQ8N594 471 aa18.46■□□□□ 0.55
MTHFD1-204ENST00000553405 HELBQ8NG08 1087 aaPredicted RBP18.46■□□□□ 0.55
MTHFD1-204ENST00000553405 MROH5Q6ZUA9 1318 aa18.46■□□□□ 0.55
MTHFD1-204ENST00000553405 TAF5LO75529 589 aa18.45■□□□□ 0.54
MTHFD1-204ENST00000553405 IL15P40933 162 aaPredicted RBP18.45■□□□□ 0.54
MTHFD1-204ENST00000553405 DPP8Q6V1X1 898 aaPredicted RBP18.45■□□□□ 0.54
MTHFD1-204ENST00000553405 ARHGAP27Q6ZUM4 889 aa18.45■□□□□ 0.54
MTHFD1-204ENST00000553405 ANKRD2Q9GZV1 360 aa18.45■□□□□ 0.54
MTHFD1-204ENST00000553405 TAOK3Q9H2K8 898 aa18.45■□□□□ 0.54
MTHFD1-204ENST00000553405 NSFL1CQ9UNZ2 370 aaKnown RBP18.45■□□□□ 0.54
MTHFD1-204ENST00000553405 FGFR2P21802 821 aa18.44■□□□□ 0.54
MTHFD1-204ENST00000553405 HDAC1Q13547 482 aaPredicted RBP18.44■□□□□ 0.54
MTHFD1-204ENST00000553405 GPR101Q96P66 508 aaPredicted RBP18.44■□□□□ 0.54
MTHFD1-204ENST00000553405 CCDC88AQ3V6T2 1871 aa18.43■□□□□ 0.54
MTHFD1-204ENST00000553405 DICER1Q9UPY3 1922 aaKnown RBP18.43■□□□□ 0.54
MTHFD1-204ENST00000553405 HMMRO75330 724 aa18.43■□□□□ 0.54
MTHFD1-204ENST00000553405 PDE8BO95263 885 aa18.43■□□□□ 0.54
MTHFD1-204ENST00000553405 KLRK1P26718 216 aa18.43■□□□□ 0.54
MTHFD1-204ENST00000553405 LEMD3Q9Y2U8 911 aa18.43■□□□□ 0.54
MTHFD1-204ENST00000553405 SURF6O75683 361 aaKnown RBP18.42■□□□□ 0.54
MTHFD1-204ENST00000553405 UFL1O94874 794 aa18.42■□□□□ 0.54
MTHFD1-204ENST00000553405 ATP2B4P23634 1241 aa18.42■□□□□ 0.54
MTHFD1-204ENST00000553405 METTL24Q5JXM2 366 aa18.42■□□□□ 0.54
MTHFD1-204ENST00000553405 C15orf52Q6ZUT6 534 aaKnown RBP18.42■□□□□ 0.54
MTHFD1-204ENST00000553405 TXNRD3Q86VQ6 643 aa18.42■□□□□ 0.54
MTHFD1-204ENST00000553405 DCTPP1Q9H773 170 aa18.42■□□□□ 0.54
MTHFD1-204ENST00000553405 ZNF277Q9NRM2 450 aaPredicted RBP18.42■□□□□ 0.54
MTHFD1-204ENST00000553405 ANKIB1Q9P2G1 1089 aa18.42■□□□□ 0.54
MTHFD1-204ENST00000553405 GGA1Q9UJY5 639 aa18.42■□□□□ 0.54
MTHFD1-204ENST00000553405 EXOC6BQ9Y2D4 811 aa18.42■□□□□ 0.54
MTHFD1-204ENST00000553405 ARAP2Q8WZ64 1704 aa18.42■□□□□ 0.54
MTHFD1-204ENST00000553405 ZNF804BA4D1E1 1349 aa18.42■□□□□ 0.54
MTHFD1-204ENST00000553405 MED23Q9ULK4 1368 aa18.42■□□□□ 0.54
MTHFD1-204ENST00000553405 KIAA2012Q0VF49 1180 aa18.41■□□□□ 0.54
MTHFD1-204ENST00000553405 TFCP2Q12800 502 aa18.41■□□□□ 0.54
MTHFD1-204ENST00000553405 IGHDP01880 384 aa18.4■□□□□ 0.54
MTHFD1-204ENST00000553405 G3BP1Q13283 466 aaKnown RBP eCLIP18.4■□□□□ 0.544e-7■■□□□ 11.8
MTHFD1-204ENST00000553405 UBE4AQ14139 1066 aa18.4■□□□□ 0.54
MTHFD1-204ENST00000553405 VPS33BQ9H267 617 aa18.4■□□□□ 0.54
MTHFD1-204ENST00000553405 ZNF609O15014 1411 aa18.4■□□□□ 0.54
MTHFD1-204ENST00000553405 ZNF646O15015 1829 aaPredicted RBP18.39■□□□□ 0.54
MTHFD1-204ENST00000553405 LMNB1P20700 586 aa18.39■□□□□ 0.53
MTHFD1-204ENST00000553405 IARSP41252 1262 aaKnown RBP18.39■□□□□ 0.53
MTHFD1-204ENST00000553405 SUPT20HQ8NEM7 779 aa18.39■□□□□ 0.53
MTHFD1-204ENST00000553405 TMX4Q9H1E5 349 aaPredicted RBP18.39■□□□□ 0.53
MTHFD1-204ENST00000553405 CEP126Q9P2H0 1117 aa18.39■□□□□ 0.53
MTHFD1-204ENST00000553405 TIAM2Q8IVF5 1701 aa18.38■□□□□ 0.53
MTHFD1-204ENST00000553405 C6orf229H3BNL8 230 aa18.38■□□□□ 0.53
MTHFD1-204ENST00000553405 PUM3Q15397 648 aaKnown RBP18.38■□□□□ 0.53
MTHFD1-204ENST00000553405 AOC3Q16853 763 aa18.38■□□□□ 0.53
MTHFD1-204ENST00000553405 GPR108Q9NPR9 543 aa18.38■□□□□ 0.53
MTHFD1-204ENST00000553405 CHD4Q14839 1912 aa18.37■□□□□ 0.53
MTHFD1-204ENST00000553405 SCN9AQ15858 1988 aa18.37■□□□□ 0.53
MTHFD1-204ENST00000553405 WASHC4Q2M389 1173 aa18.37■□□□□ 0.53
MTHFD1-204ENST00000553405 RHPN1Q8TCX5 695 aa18.37■□□□□ 0.53
MTHFD1-204ENST00000553405 PPIP5K2O43314 1243 aa18.36■□□□□ 0.53
MTHFD1-204ENST00000553405 RAB11FIP3O75154 756 aa18.36■□□□□ 0.53
MTHFD1-204ENST00000553405 C9orf131Q5VYM1 1079 aa18.36■□□□□ 0.53
MTHFD1-204ENST00000553405 SMC5Q8IY18 1101 aa18.36■□□□□ 0.53
MTHFD1-204ENST00000553405 LPIN2Q92539 896 aa18.36■□□□□ 0.53
MTHFD1-204ENST00000553405 FAM84BQ96KN1 310 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms