RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 BTG4Q9NY30 223 aa12.34□□□□□ -0.43
RFX4-210ENST00000552773 PLCH1Q4KWH8 1693 aa12.34□□□□□ -0.43
RFX4-210ENST00000552773 SHANK3Q9BYB0 1731 aa12.33□□□□□ -0.44
RFX4-210ENST00000552773 ANKRD18BA2A2Z9 1011 aa12.33□□□□□ -0.44
RFX4-210ENST00000552773 ESPNB1AK53 854 aa12.33□□□□□ -0.44
RFX4-210ENST00000552773 DHX16O60231 1041 aaKnown RBP12.33□□□□□ -0.44
RFX4-210ENST00000552773 IL6STP40189 918 aaPredicted RBP12.33□□□□□ -0.44
RFX4-210ENST00000552773 ME3Q16798 604 aa12.33□□□□□ -0.44
RFX4-210ENST00000552773 ZMYM1Q5SVZ6 1142 aa12.33□□□□□ -0.44
RFX4-210ENST00000552773 DHX32Q7L7V1 743 aaKnown RBP12.33□□□□□ -0.44
RFX4-210ENST00000552773 PANK2Q9BZ23 570 aa12.33□□□□□ -0.44
RFX4-210ENST00000552773 GOLGA6L4A6NEF3 574 aa12.32□□□□□ -0.44
RFX4-210ENST00000552773 MSNP26038 577 aaKnown RBP12.32□□□□□ -0.44
RFX4-210ENST00000552773 PIP4K2AP48426 406 aaPredicted RBP12.32□□□□□ -0.44
RFX4-210ENST00000552773 FOXD4L5Q5VV16 416 aaPredicted RBP12.32□□□□□ -0.44
RFX4-210ENST00000552773 FBXL16Q8N461 479 aa12.32□□□□□ -0.44
RFX4-210ENST00000552773 FOXD4L4Q8WXT5 416 aaPredicted RBP12.32□□□□□ -0.44
RFX4-210ENST00000552773 PIGBQ92521 554 aa12.32□□□□□ -0.44
RFX4-210ENST00000552773 CFAP45Q9UL16 551 aa12.32□□□□□ -0.44
RFX4-210ENST00000552773 TPCN1Q9ULQ1 816 aa12.32□□□□□ -0.44
RFX4-210ENST00000552773 MTMR6Q9Y217 621 aa12.32□□□□□ -0.44
RFX4-210ENST00000552773 COL22A1Q8NFW1 1626 aaPredicted RBP12.32□□□□□ -0.44
RFX4-210ENST00000552773 DISP2A7MBM2 1401 aa12.32□□□□□ -0.44
RFX4-210ENST00000552773 BCL9O00512 1426 aa12.32□□□□□ -0.44
RFX4-210ENST00000552773 VPS37CA5D8V6 355 aaPredicted RBP12.32□□□□□ -0.44
RFX4-210ENST00000552773 GOLIM4O00461 696 aa12.32□□□□□ -0.44
RFX4-210ENST00000552773 UQCRFS1P1P0C7P4 283 aa12.32□□□□□ -0.44
RFX4-210ENST00000552773 TMEM63CQ9P1W3 806 aa12.32□□□□□ -0.44
RFX4-210ENST00000552773 TJP1Q07157 1748 aa12.32□□□□□ -0.44
RFX4-210ENST00000552773 AHDC1Q5TGY3 1603 aaPredicted RBP12.32□□□□□ -0.44
RFX4-210ENST00000552773 WDR19Q8NEZ3 1342 aa12.31□□□□□ -0.44
RFX4-210ENST00000552773 SYCE3A1L190 88 aa12.31□□□□□ -0.44
RFX4-210ENST00000552773 PRIM1P49642 420 aaKnown RBP12.31□□□□□ -0.44
RFX4-210ENST00000552773 IMMTQ16891 758 aaKnown RBP12.31□□□□□ -0.44
RFX4-210ENST00000552773 DDX46Q7L014 1031 aaKnown RBP12.31□□□□□ -0.44
RFX4-210ENST00000552773 ZNF589Q86UQ0 364 aaPredicted RBP12.31□□□□□ -0.44
RFX4-210ENST00000552773 ZSCAN30Q86W11 494 aa12.31□□□□□ -0.44
RFX4-210ENST00000552773 DNAJC10Q8IXB1 793 aa12.31□□□□□ -0.44
RFX4-210ENST00000552773 GTF3C6Q969F1 213 aa12.31□□□□□ -0.44
RFX4-210ENST00000552773 CCDC39Q9UFE4 941 aa12.31□□□□□ -0.44
RFX4-210ENST00000552773 H3BQV1 296 aa12.3□□□□□ -0.44
RFX4-210ENST00000552773 PDE8AO60658 829 aa12.3□□□□□ -0.44
RFX4-210ENST00000552773 CAVIN2O95810 425 aa12.3□□□□□ -0.44
RFX4-210ENST00000552773 IFFO2Q5TF58 517 aa12.3□□□□□ -0.44
RFX4-210ENST00000552773 ZNF274Q96GC6 653 aaPredicted RBP12.3□□□□□ -0.44
RFX4-210ENST00000552773 MROH5Q6ZUA9 1318 aa12.3□□□□□ -0.44
RFX4-210ENST00000552773 RGL2O15211 777 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 CTSWP56202 376 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 TIMM10P62072 90 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 PARP10Q53GL7 1025 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 METTL24Q5JXM2 366 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 NAA16Q6N069 864 aaPredicted RBP12.29□□□□□ -0.44
RFX4-210ENST00000552773 APPBP2Q92624 585 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 JARID2Q92833 1246 aaPredicted RBP12.29□□□□□ -0.44
RFX4-210ENST00000552773 TBC1D2BQ9UPU7 963 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 ZNF330Q9Y3S2 320 aaPredicted RBP12.29□□□□□ -0.44
RFX4-210ENST00000552773 KDM4FA0A1W2PPD8 638 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 PFKFB2O60825 505 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 CYP21A2P08686 494 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 CYP19A1P11511 503 aaPredicted RBP12.29□□□□□ -0.44
RFX4-210ENST00000552773 TOB2Q14106 344 aaPredicted RBP12.29□□□□□ -0.44
RFX4-210ENST00000552773 ATP2B3Q16720 1220 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 LDHAL6AQ6ZMR3 332 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 Q6ZUG5 572 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 NLRP10Q86W26 655 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 SMARCC1Q92922 1105 aaPredicted RBP12.29□□□□□ -0.44
RFX4-210ENST00000552773 XAGE2Q96GT9 111 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 PDLIM2Q96JY6 352 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 CNNM1Q9NRU3 951 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 ASAP1Q9ULH1 1129 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 CNPY2Q9Y2B0 182 aa12.29□□□□□ -0.44
RFX4-210ENST00000552773 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.29□□□□□ -0.44
RFX4-210ENST00000552773 TPM3P06753 285 aa12.28□□□□□ -0.44
RFX4-210ENST00000552773 TRDNQ13061 729 aa12.28□□□□□ -0.44
RFX4-210ENST00000552773 AGXT2Q9BYV1 514 aa12.28□□□□□ -0.44
RFX4-210ENST00000552773 RBSNQ9H1K0 784 aa12.28□□□□□ -0.44
RFX4-210ENST00000552773 DDX19AQ9NUU7 478 aaKnown RBP12.28□□□□□ -0.44
RFX4-210ENST00000552773 TRMT112Q9UI30 125 aaKnown RBP12.28□□□□□ -0.44
RFX4-210ENST00000552773 ZNF652Q9Y2D9 606 aa12.28□□□□□ -0.44
RFX4-210ENST00000552773 TOGARAM1Q9Y4F4 1720 aa12.28□□□□□ -0.44
RFX4-210ENST00000552773 IRS4O14654 1257 aaPredicted RBP12.27□□□□□ -0.45
RFX4-210ENST00000552773 FIBPO43427 364 aa12.27□□□□□ -0.45
RFX4-210ENST00000552773 LARGE1O95461 756 aa12.27□□□□□ -0.45
RFX4-210ENST00000552773 CCDC192P0DO97 292 aa12.27□□□□□ -0.45
RFX4-210ENST00000552773 HSPD1P10809 573 aaKnown RBP12.27□□□□□ -0.45
RFX4-210ENST00000552773 CPA1P15085 419 aa12.27□□□□□ -0.45
RFX4-210ENST00000552773 FKBP4Q02790 459 aaKnown RBP eCLIP12.27□□□□□ -0.45
RFX4-210ENST00000552773 WASHC4Q2M389 1173 aa12.27□□□□□ -0.45
RFX4-210ENST00000552773 LRRC24Q50LG9 513 aa12.27□□□□□ -0.45
RFX4-210ENST00000552773 DZIP3Q86Y13 1208 aaKnown RBP12.27□□□□□ -0.45
RFX4-210ENST00000552773 ZNF396Q96N95 335 aaPredicted RBP12.27□□□□□ -0.45
RFX4-210ENST00000552773 ITGA6P23229 1130 aa12.26□□□□□ -0.45
RFX4-210ENST00000552773 RALYLQ86SE5 291 aaKnown RBP12.26□□□□□ -0.45
RFX4-210ENST00000552773 NECAB1Q8N987 351 aa12.26□□□□□ -0.45
RFX4-210ENST00000552773 TTLL11Q8NHH1 800 aa12.26□□□□□ -0.45
RFX4-210ENST00000552773 SPATA32Q96LK8 384 aa12.26□□□□□ -0.45
RFX4-210ENST00000552773 RBM27Q9P2N5 1060 aaKnown RBP12.26□□□□□ -0.45
RFX4-210ENST00000552773 ANKRD36CQ5JPF3 1778 aa12.26□□□□□ -0.45
RFX4-210ENST00000552773 SLC5A1P13866 664 aa12.26□□□□□ -0.45
RFX4-210ENST00000552773 DNM1Q05193 864 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms