RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 NECTIN2Q92692 538 aa11.21□□□□□ -0.61
CDK4-213ENST00000552713 DPF2Q92785 391 aa11.21□□□□□ -0.61
CDK4-213ENST00000552713 SAGE1Q9NXZ1 904 aa11.21□□□□□ -0.61
CDK4-213ENST00000552713 SLC10A3P09131 477 aa11.2□□□□□ -0.62
CDK4-213ENST00000552713 AIMP1Q12904 312 aaKnown RBP11.2□□□□□ -0.62
CDK4-213ENST00000552713 DOK7Q18PE1 504 aa11.2□□□□□ -0.62
CDK4-213ENST00000552713 COPS6Q7L5N1 327 aa11.2□□□□□ -0.62
CDK4-213ENST00000552713 C2orf69Q8N8R5 385 aa11.2□□□□□ -0.62
CDK4-213ENST00000552713 XAGE3Q8WTP9 111 aa11.2□□□□□ -0.62
CDK4-213ENST00000552713 CELF1Q92879 486 aaKnown RBP11.2□□□□□ -0.62
CDK4-213ENST00000552713 POLLQ9UGP5 575 aa11.2□□□□□ -0.62
CDK4-213ENST00000552713 TRMT112Q9UI30 125 aaKnown RBP11.2□□□□□ -0.62
CDK4-213ENST00000552713 SH3TC1Q8TE82 1336 aa11.19□□□□□ -0.62
CDK4-213ENST00000552713 GPSM2P81274 684 aa11.19□□□□□ -0.62
CDK4-213ENST00000552713 TCIRG1Q13488 830 aa11.19□□□□□ -0.62
CDK4-213ENST00000552713 WASHC4Q2M389 1173 aa11.19□□□□□ -0.62
CDK4-213ENST00000552713 CCDC102AQ96A19 550 aa11.19□□□□□ -0.62
CDK4-213ENST00000552713 DCPSQ96C86 337 aaKnown RBP11.19□□□□□ -0.62
CDK4-213ENST00000552713 TSPYL4Q9UJ04 414 aa11.19□□□□□ -0.62
CDK4-213ENST00000552713 NSFL1CQ9UNZ2 370 aaKnown RBP11.19□□□□□ -0.62
CDK4-213ENST00000552713 ZNF646O15015 1829 aaPredicted RBP11.19□□□□□ -0.62
CDK4-213ENST00000552713 ECE2O60344 883 aa11.18□□□□□ -0.62
CDK4-213ENST00000552713 KRT24Q2M2I5 525 aa11.18□□□□□ -0.62
CDK4-213ENST00000552713 KIF4BQ2VIQ3 1234 aa11.18□□□□□ -0.62
CDK4-213ENST00000552713 PRPF38BQ5VTL8 546 aaKnown RBP11.18□□□□□ -0.62
CDK4-213ENST00000552713 CTU1Q7Z7A3 348 aaKnown RBP11.18□□□□□ -0.62
CDK4-213ENST00000552713 RASAL3Q86YV0 1011 aa11.18□□□□□ -0.62
CDK4-213ENST00000552713 GGA3Q9NZ52 723 aa11.18□□□□□ -0.62
CDK4-213ENST00000552713 SCAF8Q9UPN6 1271 aaKnown RBP11.18□□□□□ -0.62
CDK4-213ENST00000552713 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
CDK4-213ENST00000552713 C6orf229H3BNL8 230 aa11.17□□□□□ -0.62
CDK4-213ENST00000552713 MOB2Q70IA6 237 aa11.17□□□□□ -0.62
CDK4-213ENST00000552713 CDCA5Q96FF9 252 aa11.17□□□□□ -0.62
CDK4-213ENST00000552713 FAM89AQ96GI7 184 aa11.17□□□□□ -0.62
CDK4-213ENST00000552713 PAPPA2Q9BXP8 1791 aa11.17□□□□□ -0.62
CDK4-213ENST00000552713 SPEF2Q9C093 1822 aa11.16□□□□□ -0.62
CDK4-213ENST00000552713 NEFMP07197 916 aa11.16□□□□□ -0.62
CDK4-213ENST00000552713 VIL1P09327 827 aaKnown RBP11.16□□□□□ -0.62
CDK4-213ENST00000552713 RPS12P25398 132 aaKnown RBP11.16□□□□□ -0.62
CDK4-213ENST00000552713 HSP90AB3PQ58FF7 597 aa11.16□□□□□ -0.62
CDK4-213ENST00000552713 RTL5Q5HYW3 569 aaPredicted RBP11.16□□□□□ -0.62
CDK4-213ENST00000552713 TMC4Q7Z404 712 aa11.16□□□□□ -0.62
CDK4-213ENST00000552713 KIAA0100Q14667 2235 aaKnown RBP11.15□□□□□ -0.62
CDK4-213ENST00000552713 TBC1D8O95759 1140 aa11.15□□□□□ -0.62
CDK4-213ENST00000552713 SF3B3Q15393 1217 aaKnown RBP11.15□□□□□ -0.62
CDK4-213ENST00000552713 ANGEL2Q5VTE6 544 aaKnown RBP11.15□□□□□ -0.62
CDK4-213ENST00000552713 SULF1Q8IWU6 871 aa11.15□□□□□ -0.62
CDK4-213ENST00000552713 TBC1D16Q8TBP0 767 aa11.15□□□□□ -0.62
CDK4-213ENST00000552713 ATP5J2-PTCD1G3V325 749 aa11.14□□□□□ -0.63
CDK4-213ENST00000552713 SCARF1Q14162 830 aa11.14□□□□□ -0.63
CDK4-213ENST00000552713 PRAMEF18Q5VWM3 479 aa11.14□□□□□ -0.63
CDK4-213ENST00000552713 ZNF296Q8WUU4 475 aaPredicted RBP11.14□□□□□ -0.63
CDK4-213ENST00000552713 ISCA1Q9BUE6 129 aa11.14□□□□□ -0.63
CDK4-213ENST00000552713 CHPF2Q9P2E5 772 aa11.14□□□□□ -0.63
CDK4-213ENST00000552713 RIPK4P57078 832 aa11.13□□□□□ -0.63
CDK4-213ENST00000552713 ZNF280AP59817 542 aaPredicted RBP11.13□□□□□ -0.63
CDK4-213ENST00000552713 R3HDMLQ9H3Y0 253 aa11.13□□□□□ -0.63
CDK4-213ENST00000552713 SEC31BQ9NQW1 1179 aa11.13□□□□□ -0.63
CDK4-213ENST00000552713 MAPK8IP3Q9UPT6 1336 aa11.12□□□□□ -0.63
CDK4-213ENST00000552713 MYH3P11055 1940 aa11.12□□□□□ -0.63
CDK4-213ENST00000552713 WTIPA6NIX2 430 aaPredicted RBP11.12□□□□□ -0.63
CDK4-213ENST00000552713 UBE2Q2LH0YL09 131 aa11.12□□□□□ -0.63
CDK4-213ENST00000552713 RPS8P62241 208 aaKnown RBP11.12□□□□□ -0.63
CDK4-213ENST00000552713 PLBD2Q8NHP8 589 aa11.12□□□□□ -0.63
CDK4-213ENST00000552713 GMLQ99445 158 aa11.12□□□□□ -0.63
CDK4-213ENST00000552713 EYA3Q99504 573 aa11.12□□□□□ -0.63
CDK4-213ENST00000552713 IRS4O14654 1257 aaPredicted RBP11.11□□□□□ -0.63
CDK4-213ENST00000552713 UFL1O94874 794 aa11.11□□□□□ -0.63
CDK4-213ENST00000552713 TMPOP42166 694 aaKnown RBP11.11□□□□□ -0.63
CDK4-213ENST00000552713 MKRN3Q13064 507 aaKnown RBP11.11□□□□□ -0.63
CDK4-213ENST00000552713 RSBN1LQ6PCB5 846 aaPredicted RBP11.11□□□□□ -0.63
CDK4-213ENST00000552713 ANKRD13DQ6ZTN6 518 aa11.11□□□□□ -0.63
CDK4-213ENST00000552713 ZC3H12CQ9C0D7 883 aaKnown RBP11.11□□□□□ -0.63
CDK4-213ENST00000552713 PODXL2Q9NZ53 605 aa11.11□□□□□ -0.63
CDK4-213ENST00000552713 HDAC9Q9UKV0 1011 aa11.11□□□□□ -0.63
CDK4-213ENST00000552713 ZNF609O15014 1411 aa11.1□□□□□ -0.63
CDK4-213ENST00000552713 GPR25O00155 361 aa11.1□□□□□ -0.63
CDK4-213ENST00000552713 AGBL3Q8NEM8 1001 aa11.1□□□□□ -0.63
CDK4-213ENST00000552713 JARID2Q92833 1246 aaPredicted RBP11.1□□□□□ -0.63
CDK4-213ENST00000552713 MYOZ2Q9NPC6 264 aa11.1□□□□□ -0.63
CDK4-213ENST00000552713 BABAM1Q9NWV8 329 aa11.1□□□□□ -0.63
CDK4-213ENST00000552713 LAMB1P07942 1786 aa11.1□□□□□ -0.63
CDK4-213ENST00000552713 RBBP6Q7Z6E9 1792 aaKnown RBP11.1□□□□□ -0.63
CDK4-213ENST00000552713 CHL1O00533 1208 aa11.09□□□□□ -0.63
CDK4-213ENST00000552713 TM4SF4P48230 202 aa11.09□□□□□ -0.63
CDK4-213ENST00000552713 FKBP1BP68106 108 aa11.09□□□□□ -0.63
CDK4-213ENST00000552713 PKN2Q16513 984 aaKnown RBP11.09□□□□□ -0.63
CDK4-213ENST00000552713 NBPF9Q3BBW0 867 aa11.09□□□□□ -0.63
CDK4-213ENST00000552713 CCDC85AQ96PX6 553 aaPredicted RBP11.09□□□□□ -0.63
CDK4-213ENST00000552713 MXD3Q9BW11 206 aa11.09□□□□□ -0.63
CDK4-213ENST00000552713 ANKIB1Q9P2G1 1089 aa11.09□□□□□ -0.63
CDK4-213ENST00000552713 GGA1Q9UJY5 639 aa11.09□□□□□ -0.63
CDK4-213ENST00000552713 PITPNM2Q9BZ72 1349 aa11.09□□□□□ -0.63
CDK4-213ENST00000552713 G3V3G9 751 aa11.08□□□□□ -0.64
CDK4-213ENST00000552713 USP17L8P0C7I0 530 aa11.08□□□□□ -0.64
CDK4-213ENST00000552713 NEUROD2Q15784 382 aa11.08□□□□□ -0.64
CDK4-213ENST00000552713 DCAF8Q5TAQ9 597 aa11.08□□□□□ -0.64
CDK4-213ENST00000552713 HDGFL1Q5TGJ6 251 aa11.08□□□□□ -0.64
CDK4-213ENST00000552713 FBXO46Q6PJ61 603 aaPredicted RBP11.08□□□□□ -0.64
CDK4-213ENST00000552713 PNNQ9H307 717 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms