RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 ZIC5Q96T25 663 aa12.81□□□□□ -0.36
LINC00661-207ENST00000552685 PGAP2Q9UHJ9 254 aa12.81□□□□□ -0.36
LINC00661-207ENST00000552685 SCN9AQ15858 1988 aa12.8□□□□□ -0.36
LINC00661-207ENST00000552685 H7C1D1 291 aa12.8□□□□□ -0.36
LINC00661-207ENST00000552685 SLC34A2O95436 690 aa12.8□□□□□ -0.36
LINC00661-207ENST00000552685 MAP2K1Q02750 393 aaPredicted RBP12.8□□□□□ -0.36
LINC00661-207ENST00000552685 SAPCD2Q86UD0 394 aa12.8□□□□□ -0.36
LINC00661-207ENST00000552685 CDHR2Q9BYE9 1310 aa12.8□□□□□ -0.36
LINC00661-207ENST00000552685 POLR2AP24928 1970 aaKnown RBP12.8□□□□□ -0.36
LINC00661-207ENST00000552685 UFL1O94874 794 aa12.79□□□□□ -0.36
LINC00661-207ENST00000552685 PCCAP05165 728 aaPredicted RBP12.79□□□□□ -0.36
LINC00661-207ENST00000552685 ECE1P42892 770 aa12.79□□□□□ -0.36
LINC00661-207ENST00000552685 CALD1Q05682 793 aaKnown RBP12.79□□□□□ -0.36
LINC00661-207ENST00000552685 EYA3Q99504 573 aa12.79□□□□□ -0.36
LINC00661-207ENST00000552685 METTL22Q9BUU2 404 aaPredicted RBP12.79□□□□□ -0.36
LINC00661-207ENST00000552685 CWC25Q9NXE8 425 aaPredicted RBP12.79□□□□□ -0.36
LINC00661-207ENST00000552685 ANKIB1Q9P2G1 1089 aa12.79□□□□□ -0.36
LINC00661-207ENST00000552685 MAP3K2Q9Y2U5 619 aa12.79□□□□□ -0.36
LINC00661-207ENST00000552685 WTIPA6NIX2 430 aaPredicted RBP12.78□□□□□ -0.36
LINC00661-207ENST00000552685 ADM5C9JUS6 153 aa12.78□□□□□ -0.36
LINC00661-207ENST00000552685 CCDC30Q5VVM6 783 aa12.78□□□□□ -0.36
LINC00661-207ENST00000552685 CDC37L1Q7L3B6 337 aa12.78□□□□□ -0.36
LINC00661-207ENST00000552685 CCDC191Q8NCU4 936 aa12.78□□□□□ -0.36
LINC00661-207ENST00000552685 ZC3H15Q8WU90 426 aaKnown RBP12.78□□□□□ -0.36
LINC00661-207ENST00000552685 ASTN2O75129 1339 aaPredicted RBP12.78□□□□□ -0.36
LINC00661-207ENST00000552685 PI4KAP2A4QPH2 592 aa12.77□□□□□ -0.37
LINC00661-207ENST00000552685 PDE8AO60658 829 aa12.77□□□□□ -0.37
LINC00661-207ENST00000552685 IGKV5-2P06315 115 aa12.77□□□□□ -0.37
LINC00661-207ENST00000552685 CCDC152Q4G0S7 254 aa12.77□□□□□ -0.37
LINC00661-207ENST00000552685 G2E3Q7L622 706 aa12.77□□□□□ -0.37
LINC00661-207ENST00000552685 PI4KAP1Q8N8J0 262 aa12.77□□□□□ -0.37
LINC00661-207ENST00000552685 DPF2Q92785 391 aa12.77□□□□□ -0.37
LINC00661-207ENST00000552685 ZC3H12CQ9C0D7 883 aaKnown RBP12.77□□□□□ -0.37
LINC00661-207ENST00000552685 GGA1Q9UJY5 639 aa12.77□□□□□ -0.37
LINC00661-207ENST00000552685 SPEF2Q9C093 1822 aa12.76□□□□□ -0.37
LINC00661-207ENST00000552685 G3V3G9 751 aa12.76□□□□□ -0.37
LINC00661-207ENST00000552685 DDX58O95786 925 aaKnown RBP12.76□□□□□ -0.37
LINC00661-207ENST00000552685 RGS19P49795 217 aa12.76□□□□□ -0.37
LINC00661-207ENST00000552685 CWF19L2Q2TBE0 894 aaKnown RBP12.76□□□□□ -0.37
LINC00661-207ENST00000552685 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
LINC00661-207ENST00000552685 KRT26Q7Z3Y9 468 aa12.76□□□□□ -0.37
LINC00661-207ENST00000552685 BEGAINQ9BUH8 593 aa12.76□□□□□ -0.37
LINC00661-207ENST00000552685 PODXL2Q9NZ53 605 aa12.76□□□□□ -0.37
LINC00661-207ENST00000552685 CASP8AP2Q9UKL3 1982 aa12.76□□□□□ -0.37
LINC00661-207ENST00000552685 HUNKP57058 714 aa12.75□□□□□ -0.37
LINC00661-207ENST00000552685 KIF4BQ2VIQ3 1234 aa12.75□□□□□ -0.37
LINC00661-207ENST00000552685 KSR2Q6VAB6 950 aa12.75□□□□□ -0.37
LINC00661-207ENST00000552685 ANKRD18AQ8IVF6 992 aa12.75□□□□□ -0.37
LINC00661-207ENST00000552685 SALL2Q9Y467 1007 aaPredicted RBP12.75□□□□□ -0.37
LINC00661-207ENST00000552685 VIL1P09327 827 aaKnown RBP12.74□□□□□ -0.37
LINC00661-207ENST00000552685 HSP90B1P14625 803 aaKnown RBP12.74□□□□□ -0.37
LINC00661-207ENST00000552685 RPS12P25398 132 aaKnown RBP12.74□□□□□ -0.37
LINC00661-207ENST00000552685 MAP2K2P36507 400 aa12.74□□□□□ -0.37
LINC00661-207ENST00000552685 CTSWP56202 376 aa12.74□□□□□ -0.37
LINC00661-207ENST00000552685 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
LINC00661-207ENST00000552685 MCOLN1Q9GZU1 580 aa12.74□□□□□ -0.37
LINC00661-207ENST00000552685 GREM2Q9H772 168 aa12.74□□□□□ -0.37
LINC00661-207ENST00000552685 GGA3Q9NZ52 723 aa12.74□□□□□ -0.37
LINC00661-207ENST00000552685 SCAF8Q9UPN6 1271 aaKnown RBP12.74□□□□□ -0.37
LINC00661-207ENST00000552685 XDHP47989 1333 aa12.73□□□□□ -0.37
LINC00661-207ENST00000552685 NEURL1BA8MQ27 555 aa12.73□□□□□ -0.37
LINC00661-207ENST00000552685 FAM155AB1AL88 458 aaPredicted RBP12.73□□□□□ -0.37
LINC00661-207ENST00000552685 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
LINC00661-207ENST00000552685 TWISTNBQ3B726 338 aaPredicted RBP12.73□□□□□ -0.37
LINC00661-207ENST00000552685 RSBN1LQ6PCB5 846 aaPredicted RBP12.73□□□□□ -0.37
LINC00661-207ENST00000552685 TTLL11Q8NHH1 800 aa12.73□□□□□ -0.37
LINC00661-207ENST00000552685 DCPSQ96C86 337 aaKnown RBP12.73□□□□□ -0.37
LINC00661-207ENST00000552685 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
LINC00661-207ENST00000552685 MXD3Q9BW11 206 aa12.73□□□□□ -0.37
LINC00661-207ENST00000552685 STK31Q9BXU1 1019 aa12.73□□□□□ -0.37
LINC00661-207ENST00000552685 GBA2Q9HCG7 927 aaPredicted RBP12.73□□□□□ -0.37
LINC00661-207ENST00000552685 MYH3P11055 1940 aa12.72□□□□□ -0.37
LINC00661-207ENST00000552685 CCDC85CA6NKD9 419 aa12.72□□□□□ -0.37
LINC00661-207ENST00000552685 BRPF1P55201 1214 aaPredicted RBP12.72□□□□□ -0.37
LINC00661-207ENST00000552685 NEXNQ0ZGT2 675 aa12.72□□□□□ -0.37
LINC00661-207ENST00000552685 UBE3BQ7Z3V4 1068 aa12.72□□□□□ -0.37
LINC00661-207ENST00000552685 ATP2B4P23634 1241 aa12.71□□□□□ -0.37
LINC00661-207ENST00000552685 SCARF1Q14162 830 aa12.71□□□□□ -0.37
LINC00661-207ENST00000552685 CCDC27Q2M243 656 aa12.71□□□□□ -0.37
LINC00661-207ENST00000552685 ANGEL2Q5VTE6 544 aaKnown RBP12.71□□□□□ -0.37
LINC00661-207ENST00000552685 FBXW7Q969H0 707 aa12.71□□□□□ -0.37
LINC00661-207ENST00000552685 CDC5LQ99459 802 aaKnown RBP12.71□□□□□ -0.37
LINC00661-207ENST00000552685 MINPP1Q9UNW1 487 aa12.71□□□□□ -0.37
LINC00661-207ENST00000552685 PSME4Q14997 1843 aa12.71□□□□□ -0.38
LINC00661-207ENST00000552685 FANCIQ9NVI1 1328 aa12.7□□□□□ -0.38
LINC00661-207ENST00000552685 ZNF646O15015 1829 aaPredicted RBP12.7□□□□□ -0.38
LINC00661-207ENST00000552685 USP17L3A6NCW0 530 aa12.7□□□□□ -0.38
LINC00661-207ENST00000552685 USP17L4A6NCW7 530 aa12.7□□□□□ -0.38
LINC00661-207ENST00000552685 H7C1W4 665 aa12.7□□□□□ -0.38
LINC00661-207ENST00000552685 KLRK1P26718 216 aa12.7□□□□□ -0.38
LINC00661-207ENST00000552685 ZNF280AP59817 542 aaPredicted RBP12.7□□□□□ -0.38
LINC00661-207ENST00000552685 RGMBQ6NW40 437 aa12.7□□□□□ -0.38
LINC00661-207ENST00000552685 USP17L1Q7RTZ2 530 aa12.7□□□□□ -0.38
LINC00661-207ENST00000552685 TXNRD3Q86VQ6 643 aa12.7□□□□□ -0.38
LINC00661-207ENST00000552685 SULF1Q8IWU6 871 aa12.7□□□□□ -0.38
LINC00661-207ENST00000552685 C2orf69Q8N8R5 385 aa12.7□□□□□ -0.38
LINC00661-207ENST00000552685 CDCA5Q96FF9 252 aa12.7□□□□□ -0.38
LINC00661-207ENST00000552685 GMLQ99445 158 aa12.7□□□□□ -0.38
LINC00661-207ENST00000552685 MRS2Q9HD23 443 aa12.7□□□□□ -0.38
LINC00661-207ENST00000552685 USP17L8P0C7I0 530 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms