RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 ZNF652Q9Y2D9 606 aa12.61□□□□□ -0.39
TGFBR1-209ENST00000552516 CROCC2H7BZ55 1655 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 RBM25P49756 843 aaKnown RBP12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 METAP2P50579 478 aaKnown RBP eCLIP12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 GAS2L3Q86XJ1 694 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 GPR101Q96P66 508 aaPredicted RBP12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 DBNLQ9UJU6 430 aaKnown RBP12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 INCENPQ9NQS7 918 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 TSPY2A6NKD2 308 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 CDC37L1Q7L3B6 337 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 DNAJC25Q9H1X3 360 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 EYA2O00167 538 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 LARGE1O95461 756 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 ADCY5O95622 1261 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 GYG1P46976 350 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 CCDC173Q0VFZ6 552 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 PTPN21Q16825 1174 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 CCAR1Q8IX12 1150 aaKnown RBP12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 ALKQ9UM73 1620 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 ANKRD18AQ8IVF6 992 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 CCDC34Q96HJ3 373 aa12.6□□□□□ -0.39
TGFBR1-209ENST00000552516 FAM135BQ49AJ0 1406 aa12.59□□□□□ -0.39
TGFBR1-209ENST00000552516 PLEKHG1Q9ULL1 1385 aa12.59□□□□□ -0.39
TGFBR1-209ENST00000552516 RBSNQ9H1K0 784 aa12.59□□□□□ -0.39
TGFBR1-209ENST00000552516 GJB4Q9NTQ9 266 aa12.59□□□□□ -0.39
TGFBR1-209ENST00000552516 ME3Q16798 604 aa12.59□□□□□ -0.39
TGFBR1-209ENST00000552516 OLFM4Q6UX06 510 aa12.59□□□□□ -0.39
TGFBR1-209ENST00000552516 MFSD6Q6ZSS7 791 aa12.59□□□□□ -0.39
TGFBR1-209ENST00000552516 UTP14AQ9BVJ6 771 aaKnown RBP12.59□□□□□ -0.39
TGFBR1-209ENST00000552516 FTOQ9C0B1 505 aaKnown RBP eCLIP12.59□□□□□ -0.391e-7■□□□□ 8.2
TGFBR1-209ENST00000552516 BCAMP50895 628 aa12.59□□□□□ -0.39
TGFBR1-209ENST00000552516 NAP1L1P55209 391 aaKnown RBP12.59□□□□□ -0.39
TGFBR1-209ENST00000552516 ZSCAN25Q6NSZ9 544 aa12.59□□□□□ -0.39
TGFBR1-209ENST00000552516 SSH3Q8TE77 659 aa12.59□□□□□ -0.39
TGFBR1-209ENST00000552516 AFMP43652 599 aa12.59□□□□□ -0.39
TGFBR1-209ENST00000552516 HLFQ16534 295 aa12.59□□□□□ -0.39
TGFBR1-209ENST00000552516 A0A1B0GVL5 298 aa12.58□□□□□ -0.39
TGFBR1-209ENST00000552516 F13A1P00488 732 aa12.58□□□□□ -0.39
TGFBR1-209ENST00000552516 C16orf45Q96MC5 204 aaPredicted RBP12.58□□□□□ -0.39
TGFBR1-209ENST00000552516 BRINP3Q76B58 766 aa12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 RUFY3Q7L099 469 aa12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 SDR42E1Q8WUS8 393 aa12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 CPS1P31327 1500 aa12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 PTPDC1A2A3K4 754 aa12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 IARSP41252 1262 aaKnown RBP12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 LUZP1Q86V48 1076 aa12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 CCDC39Q9UFE4 941 aa12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 IBSPP21815 317 aaPredicted RBP12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 CTDP1Q9Y5B0 961 aaPredicted RBP12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 PLXNC1O60486 1568 aa12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 SASH1O94885 1247 aa12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 XBP1P17861 261 aa12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 KLHL40Q2TBA0 621 aa12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 ARHGEF10O15013 1369 aa12.58□□□□□ -0.4
TGFBR1-209ENST00000552516 KCNQ2O43526 872 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 DNA2P51530 1060 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 CFAP100Q494V2 611 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 CCDC152Q4G0S7 254 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 IL25Q9H293 177 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 CFAP45Q9UL16 551 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 IGKV5-2P06315 115 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 NCOA7Q8NI08 942 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 SNX21Q969T3 373 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 BRMS1Q9HCU9 246 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 RNF113AO15541 343 aaKnown RBP12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 RBM26Q5T8P6 1007 aaKnown RBP12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 NLRP3Q96P20 1036 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 ALG1Q9BT22 464 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 GPAA1O43292 621 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 TOM1O60784 492 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 STAMQ92783 540 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 SH2B1Q9NRF2 756 aaPredicted RBP12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 UNC13BO14795 1591 aa12.57□□□□□ -0.4
TGFBR1-209ENST00000552516 CHMP4BP1P59074 171 aa12.56□□□□□ -0.4
TGFBR1-209ENST00000552516 ANO6Q4KMQ2 910 aa12.56□□□□□ -0.4
TGFBR1-209ENST00000552516 CCDC183Q5T5S1 534 aa12.56□□□□□ -0.4
TGFBR1-209ENST00000552516 PIGBQ92521 554 aa12.56□□□□□ -0.4
TGFBR1-209ENST00000552516 RRAGDQ9NQL2 400 aaPredicted RBP12.56□□□□□ -0.4
TGFBR1-209ENST00000552516 AATFQ9NY61 560 aaKnown RBP eCLIP12.56□□□□□ -0.45e-6■■□□□ 11.7
TGFBR1-209ENST00000552516 TMEM63CQ9P1W3 806 aa12.56□□□□□ -0.4
TGFBR1-209ENST00000552516 TPCN1Q9ULQ1 816 aa12.56□□□□□ -0.4
TGFBR1-209ENST00000552516 TCEAL9Q9UHQ7 104 aa12.56□□□□□ -0.4
TGFBR1-209ENST00000552516 ZNF165P49910 485 aa12.56□□□□□ -0.4
TGFBR1-209ENST00000552516 CCNL1Q9UK58 526 aaPredicted RBP12.56□□□□□ -0.4
TGFBR1-209ENST00000552516 TPM3P06753 285 aa12.56□□□□□ -0.4
TGFBR1-209ENST00000552516 MCM5P33992 734 aa12.56□□□□□ -0.4
TGFBR1-209ENST00000552516 CDC5LQ99459 802 aaKnown RBP12.56□□□□□ -0.4
TGFBR1-209ENST00000552516 MCM9Q9NXL9 1143 aa12.56□□□□□ -0.4
TGFBR1-209ENST00000552516 PHKA1P46020 1223 aa12.55□□□□□ -0.4
TGFBR1-209ENST00000552516 CCDC96Q2M329 555 aa12.55□□□□□ -0.4
TGFBR1-209ENST00000552516 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.55□□□□□ -0.4
TGFBR1-209ENST00000552516 V9GYY5 206 aaPredicted RBP12.55□□□□□ -0.4
TGFBR1-209ENST00000552516 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
TGFBR1-209ENST00000552516 CRACR2BQ8N4Y2 399 aaPredicted RBP12.55□□□□□ -0.4
TGFBR1-209ENST00000552516 SRP68Q9UHB9 627 aaKnown RBP12.55□□□□□ -0.4
TGFBR1-209ENST00000552516 NLRP5P59047 1200 aa12.55□□□□□ -0.4
TGFBR1-209ENST00000552516 ZNF444Q8N0Y2 327 aaPredicted RBP12.55□□□□□ -0.4
TGFBR1-209ENST00000552516 CLASP1Q7Z460 1538 aa12.55□□□□□ -0.4
TGFBR1-209ENST00000552516 SLC3A2P08195 630 aaKnown RBP12.55□□□□□ -0.4
TGFBR1-209ENST00000552516 FAM47AQ5JRC9 791 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms