RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 UBE3BQ7Z3V4 1068 aa13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 PIGBQ92521 554 aa13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 JARID2Q92833 1246 aaPredicted RBP13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 C8orf37Q96NL8 207 aa13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 SIL1Q9H173 461 aa13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 CCDC9Q9Y3X0 531 aaKnown RBP13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 RAD50Q92878 1312 aa13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 A0A087WZG4 1122 aa13.03□□□□□ -0.32
TUBA1C-209ENST00000552448 A1BGP04217 495 aa13.03□□□□□ -0.32
TUBA1C-209ENST00000552448 TERF2Q15554 542 aa13.03□□□□□ -0.32
TUBA1C-209ENST00000552448 RNF20Q5VTR2 975 aa13.03□□□□□ -0.32
TUBA1C-209ENST00000552448 TTLL7Q6ZT98 887 aa13.03□□□□□ -0.32
TUBA1C-209ENST00000552448 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.03□□□□□ -0.32
TUBA1C-209ENST00000552448 CCDC8Q9H0W5 538 aaPredicted RBP13.03□□□□□ -0.32
TUBA1C-209ENST00000552448 NUP188Q5SRE5 1749 aa13.03□□□□□ -0.32
TUBA1C-209ENST00000552448 KAT6BQ8WYB5 2073 aa13.02□□□□□ -0.32
TUBA1C-209ENST00000552448 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.32
TUBA1C-209ENST00000552448 PTPN12Q05209 780 aaKnown RBP13.02□□□□□ -0.32
TUBA1C-209ENST00000552448 CWC27Q6UX04 472 aaKnown RBP13.02□□□□□ -0.32
TUBA1C-209ENST00000552448 EVI5LQ96CN4 794 aa13.02□□□□□ -0.32
TUBA1C-209ENST00000552448 FUCA2Q9BTY2 467 aa13.02□□□□□ -0.32
TUBA1C-209ENST00000552448 TLR7Q9NYK1 1049 aaKnown RBP13.02□□□□□ -0.32
TUBA1C-209ENST00000552448 RPAP1Q9BWH6 1393 aaPredicted RBP13.02□□□□□ -0.32
TUBA1C-209ENST00000552448 CICQ96RK0 1608 aaPredicted RBP13.02□□□□□ -0.33
TUBA1C-209ENST00000552448 H7C1W4 665 aa13.02□□□□□ -0.33
TUBA1C-209ENST00000552448 CCDC192P0DO97 292 aa13.02□□□□□ -0.33
TUBA1C-209ENST00000552448 SLFNL1Q499Z3 407 aa13.02□□□□□ -0.33
TUBA1C-209ENST00000552448 CCDC112Q8NEF3 446 aa13.02□□□□□ -0.33
TUBA1C-209ENST00000552448 ATG3Q9NT62 314 aa13.02□□□□□ -0.33
TUBA1C-209ENST00000552448 STARD3NLO95772 234 aa13.01□□□□□ -0.33
TUBA1C-209ENST00000552448 ZNF397Q8NF99 534 aaPredicted RBP13.01□□□□□ -0.33
TUBA1C-209ENST00000552448 KIF18AQ8NI77 898 aa13.01□□□□□ -0.33
TUBA1C-209ENST00000552448 RUFY2Q8WXA3 655 aa13.01□□□□□ -0.33
TUBA1C-209ENST00000552448 KCNF1Q9H3M0 494 aa13.01□□□□□ -0.33
TUBA1C-209ENST00000552448 GADD45BO75293 160 aaPredicted RBP13□□□□□ -0.33
TUBA1C-209ENST00000552448 FOXO4P98177 505 aa13□□□□□ -0.33
TUBA1C-209ENST00000552448 UPF3BQ9BZI7 483 aaKnown RBP13□□□□□ -0.33
TUBA1C-209ENST00000552448 ASAP1Q9ULH1 1129 aa13□□□□□ -0.33
TUBA1C-209ENST00000552448 PYCARDQ9ULZ3 195 aa13□□□□□ -0.33
TUBA1C-209ENST00000552448 ZSCAN21Q9Y5A6 473 aaPredicted RBP13□□□□□ -0.33
TUBA1C-209ENST00000552448 SNX14Q9Y5W7 946 aa13□□□□□ -0.33
TUBA1C-209ENST00000552448 NEMFO60524 1076 aa12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 TAF7LQ5H9L4 462 aa12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 C17orf53Q8N3J3 647 aaPredicted RBP12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 CWC25Q9NXE8 425 aaPredicted RBP12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 FAM53CQ9NYF3 392 aa12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 USP21Q9UK80 565 aa12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 TJP1Q07157 1748 aa12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 ZNF831Q5JPB2 1677 aa12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 THSD7AQ9UPZ6 1657 aa12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 CAVIN2O95810 425 aa12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 ZSCAN22P10073 491 aaPredicted RBP12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 FOXD4L5Q5VV16 416 aaPredicted RBP12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 LMBR1LQ6UX01 489 aa12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 RASEFQ8IZ41 740 aa12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 FAM200AQ8TCP9 573 aa12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 FOXD4L4Q8WXT5 416 aaPredicted RBP12.99□□□□□ -0.33
TUBA1C-209ENST00000552448 TULP2O00295 520 aa12.98□□□□□ -0.33
TUBA1C-209ENST00000552448 KCNJ4P48050 445 aa12.98□□□□□ -0.33
TUBA1C-209ENST00000552448 IRX5P78411 483 aaPredicted RBP12.98□□□□□ -0.33
TUBA1C-209ENST00000552448 PTH1RQ03431 593 aa12.98□□□□□ -0.33
TUBA1C-209ENST00000552448 TFCP2Q12800 502 aa12.98□□□□□ -0.33
TUBA1C-209ENST00000552448 TNNI3KQ59H18 835 aa12.98□□□□□ -0.33
TUBA1C-209ENST00000552448 MEX3CQ5U5Q3 659 aaKnown RBP12.98□□□□□ -0.33
TUBA1C-209ENST00000552448 MARCH10Q8NA82 808 aaPredicted RBP12.98□□□□□ -0.33
TUBA1C-209ENST00000552448 CCDC191Q8NCU4 936 aa12.98□□□□□ -0.33
TUBA1C-209ENST00000552448 ZBTB3Q9H5J0 574 aa12.98□□□□□ -0.33
TUBA1C-209ENST00000552448 SNRKQ9NRH2 765 aa12.98□□□□□ -0.33
TUBA1C-209ENST00000552448 FPGT-TNNI3KV9GXZ4 949 aa12.98□□□□□ -0.33
TUBA1C-209ENST00000552448 CCDC171Q6TFL3 1326 aa12.97□□□□□ -0.33
TUBA1C-209ENST00000552448 FAM177BA6PVY3 158 aa12.97□□□□□ -0.33
TUBA1C-209ENST00000552448 HIP1O00291 1037 aa12.97□□□□□ -0.33
TUBA1C-209ENST00000552448 HSPA1LP34931 641 aa12.97□□□□□ -0.33
TUBA1C-209ENST00000552448 KCNB2Q92953 911 aa12.97□□□□□ -0.33
TUBA1C-209ENST00000552448 BOLA2Q9H3K6 86 aa12.97□□□□□ -0.33
TUBA1C-209ENST00000552448 DBNLQ9UJU6 430 aaKnown RBP12.97□□□□□ -0.33
TUBA1C-209ENST00000552448 KIF2AO00139 706 aaPredicted RBP12.97□□□□□ -0.33
TUBA1C-209ENST00000552448 TNNT1P13805 278 aa12.97□□□□□ -0.33
TUBA1C-209ENST00000552448 ATP5JP18859 108 aa12.97□□□□□ -0.33
TUBA1C-209ENST00000552448 SYTL4Q96C24 671 aaPredicted RBP12.97□□□□□ -0.33
TUBA1C-209ENST00000552448 TTC14Q96N46 770 aa12.97□□□□□ -0.33
TUBA1C-209ENST00000552448 NMIQ13287 307 aaPredicted RBP12.96□□□□□ -0.33
TUBA1C-209ENST00000552448 FAM98CQ17RN3 349 aaKnown RBP12.96□□□□□ -0.33
TUBA1C-209ENST00000552448 SMARCC1Q92922 1105 aaPredicted RBP12.96□□□□□ -0.33
TUBA1C-209ENST00000552448 FAM227BQ96M60 508 aa12.96□□□□□ -0.33
TUBA1C-209ENST00000552448 CDC25BP30305 580 aa12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 NECTIN1Q15223 517 aa12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 NOL8Q76FK4 1167 aaKnown RBP12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 DNAJC10Q8IXB1 793 aa12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 ERO1AQ96HE7 468 aa12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 CHAMP1Q96JM3 812 aa12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 ISCA1Q9BUE6 129 aa12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 RREB1Q92766 1687 aa12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 STX6O43752 255 aa12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 F13A1P00488 732 aa12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 TUBB4AP04350 444 aa12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 PLCB2Q00722 1185 aa12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 KIF6Q6ZMV9 814 aa12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 ATG9AQ7Z3C6 839 aa12.95□□□□□ -0.34
TUBA1C-209ENST00000552448 FSD1Q9BTV5 496 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms