RNA–Protein interactions for RNA: ENST00000551477.5

LETMD1-230, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 1,186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-230ENST00000551477 CCDC57Q2TAC2 916 aa21.4■■□□□ 1.02
LETMD1-230ENST00000551477 LMBR1LQ6UX01 489 aa21.4■■□□□ 1.02
LETMD1-230ENST00000551477 TBC1D16Q8TBP0 767 aa21.4■■□□□ 1.02
LETMD1-230ENST00000551477 POLLQ9UGP5 575 aa21.4■■□□□ 1.02
LETMD1-230ENST00000551477 ZNRF3Q9ULT6 936 aa21.4■■□□□ 1.02
LETMD1-230ENST00000551477 SCN4AP35499 1836 aa21.4■■□□□ 1.02
LETMD1-230ENST00000551477 COL4A5P29400 1685 aa21.4■■□□□ 1.02
LETMD1-230ENST00000551477 UFL1O94874 794 aa21.39■■□□□ 1.01
LETMD1-230ENST00000551477 L3MBTL3Q96JM7 780 aaPredicted RBP21.39■■□□□ 1.01
LETMD1-230ENST00000551477 ATP2B4P23634 1241 aa21.38■■□□□ 1.01
LETMD1-230ENST00000551477 EPHA10Q5JZY3 1008 aa21.38■■□□□ 1.01
LETMD1-230ENST00000551477 ZC3H12CQ9C0D7 883 aaKnown RBP21.38■■□□□ 1.01
LETMD1-230ENST00000551477 MINPP1Q9UNW1 487 aa21.38■■□□□ 1.01
LETMD1-230ENST00000551477 G3V3G9 751 aa21.37■■□□□ 1.01
LETMD1-230ENST00000551477 BCAR3O75815 825 aa21.37■■□□□ 1.01
LETMD1-230ENST00000551477 TAF7LQ5H9L4 462 aa21.37■■□□□ 1.01
LETMD1-230ENST00000551477 DCAF8Q5TAQ9 597 aa21.37■■□□□ 1.01
LETMD1-230ENST00000551477 RBM46Q8TBY0 533 aaKnown RBP21.37■■□□□ 1.01
LETMD1-230ENST00000551477 FRAT1Q92837 279 aaPredicted RBP21.37■■□□□ 1.01
LETMD1-230ENST00000551477 SUCLG2Q96I99 432 aa21.37■■□□□ 1.01
LETMD1-230ENST00000551477 ANKRD2Q9GZV1 360 aa21.37■■□□□ 1.01
LETMD1-230ENST00000551477 USP44Q9H0E7 712 aa21.37■■□□□ 1.01
LETMD1-230ENST00000551477 HDAC5Q9UQL6 1122 aa21.37■■□□□ 1.01
LETMD1-230ENST00000551477 GJA3Q9Y6H8 435 aa21.37■■□□□ 1.01
LETMD1-230ENST00000551477 POTECB2RU33 542 aa21.36■■□□□ 1.01
LETMD1-230ENST00000551477 RIMBP2O15034 1052 aa21.36■■□□□ 1.01
LETMD1-230ENST00000551477 TNIP1Q15025 636 aa21.35■■□□□ 1.01
LETMD1-230ENST00000551477 LMOD1P29536 600 aaPredicted RBP21.34■■□□□ 1.01
LETMD1-230ENST00000551477 ATF7IPQ6VMQ6 1270 aa21.34■■□□□ 1.01
LETMD1-230ENST00000551477 KAZALD1Q96I82 304 aa21.34■■□□□ 1.01
LETMD1-230ENST00000551477 BICC1Q9H694 974 aaKnown RBP21.34■■□□□ 1.01
LETMD1-230ENST00000551477 HACL1Q9UJ83 578 aa21.34■■□□□ 1.01
LETMD1-230ENST00000551477 LEMD3Q9Y2U8 911 aa21.34■■□□□ 1.01
LETMD1-230ENST00000551477 UBTFL1P0CB47 393 aaPredicted RBP21.33■■□□□ 1.01
LETMD1-230ENST00000551477 CXCL9Q07325 125 aa21.33■■□□□ 1.01
LETMD1-230ENST00000551477 FSTL1Q12841 308 aa21.33■■□□□ 1.01
LETMD1-230ENST00000551477 ZKSCAN2Q63HK3 967 aa21.33■■□□□ 1.01
LETMD1-230ENST00000551477 INTS3Q68E01 1043 aaKnown RBP21.33■■□□□ 1.01
LETMD1-230ENST00000551477 CIAPIN1Q6FI81 312 aa21.33■■□□□ 1.01
LETMD1-230ENST00000551477 SMC1BQ8NDV3 1235 aa21.33■■□□□ 1.01
LETMD1-230ENST00000551477 RABL6Q3YEC7 729 aaPredicted RBP21.32■■□□□ 1
LETMD1-230ENST00000551477 LDHAL6AQ6ZMR3 332 aa21.32■■□□□ 1
LETMD1-230ENST00000551477 GPR101Q96P66 508 aaPredicted RBP21.32■■□□□ 1
LETMD1-230ENST00000551477 DBNDD1Q9H9R9 158 aa21.32■■□□□ 1
LETMD1-230ENST00000551477 CNNM1Q9NRU3 951 aa21.32■■□□□ 1
LETMD1-230ENST00000551477 ECE2O60344 883 aa21.31■■□□□ 1
LETMD1-230ENST00000551477 RAD17O75943 681 aa21.31■■□□□ 1
LETMD1-230ENST00000551477 TRIM27P14373 513 aa21.31■■□□□ 1
LETMD1-230ENST00000551477 KCNJ4P48050 445 aa21.31■■□□□ 1
LETMD1-230ENST00000551477 CHRNDQ07001 517 aa21.31■■□□□ 1
LETMD1-230ENST00000551477 DOK7Q18PE1 504 aa21.31■■□□□ 1
LETMD1-230ENST00000551477 TAF1DQ9H5J8 278 aaPredicted RBP21.31■■□□□ 1
LETMD1-230ENST00000551477 YDJCA8MPS7 323 aa21.3■■□□□ 1
LETMD1-230ENST00000551477 PNMA8AQ86V59 439 aaPredicted RBP21.3■■□□□ 1
LETMD1-230ENST00000551477 ANKRD44Q8N8A2 993 aa21.3■■□□□ 1
LETMD1-230ENST00000551477 ZNF594Q96JF6 807 aaPredicted RBP21.3■■□□□ 1
LETMD1-230ENST00000551477 MED23Q9ULK4 1368 aa21.3■■□□□ 1
LETMD1-230ENST00000551477 ZNF804BA4D1E1 1349 aa21.29■■□□□ 1
LETMD1-230ENST00000551477 EPHX2P34913 555 aa21.29■■□□□ 1
LETMD1-230ENST00000551477 GNAI3P08754 354 aa21.28■■□□□ 1
LETMD1-230ENST00000551477 A0A1B0GUL6 1792 aa21.28■■□□□ 1
LETMD1-230ENST00000551477 SCNN1DP51172 638 aa21.27■■□□□ 1
LETMD1-230ENST00000551477 EAPPQ56P03 285 aaPredicted RBP21.27■■□□□ 1
LETMD1-230ENST00000551477 PODNQ7Z5L7 613 aa21.27■■□□□ 1
LETMD1-230ENST00000551477 FTSJ3Q8IY81 847 aaKnown RBP21.27■■□□□ 1
LETMD1-230ENST00000551477 CLUAP1Q96AJ1 413 aa21.27■■□□□ 1
LETMD1-230ENST00000551477 HSPA6P17066 643 aa21.26■□□□□ 0.99
LETMD1-230ENST00000551477 GMPSP49915 693 aaPredicted RBP21.26■□□□□ 0.99
LETMD1-230ENST00000551477 LDHDQ86WU2 507 aa21.26■□□□□ 0.99
LETMD1-230ENST00000551477 GPRC5DQ9NZD1 345 aa21.26■□□□□ 0.99
LETMD1-230ENST00000551477 PSMD14O00487 310 aa21.25■□□□□ 0.99
LETMD1-230ENST00000551477 TAF5LO75529 589 aa21.25■□□□□ 0.99
LETMD1-230ENST00000551477 CHADLQ6NUI6 762 aa21.25■□□□□ 0.99
LETMD1-230ENST00000551477 HELBQ8NG08 1087 aaPredicted RBP21.25■□□□□ 0.99
LETMD1-230ENST00000551477 MEIS3Q99687 375 aa21.25■□□□□ 0.99
LETMD1-230ENST00000551477 COA1Q9GZY4 146 aa21.25■□□□□ 0.99
LETMD1-230ENST00000551477 CLEC11AQ9Y240 323 aa21.25■□□□□ 0.99
LETMD1-230ENST00000551477 MROH5Q6ZUA9 1318 aa21.25■□□□□ 0.99
LETMD1-230ENST00000551477 PSME4Q14997 1843 aa21.25■□□□□ 0.99
LETMD1-230ENST00000551477 WTIPA6NIX2 430 aaPredicted RBP21.24■□□□□ 0.99
LETMD1-230ENST00000551477 PLIN1O60240 522 aa21.24■□□□□ 0.99
LETMD1-230ENST00000551477 RPS12P25398 132 aaKnown RBP21.24■□□□□ 0.99
LETMD1-230ENST00000551477 EPS15P42566 896 aa21.24■□□□□ 0.99
LETMD1-230ENST00000551477 DZIP1LQ8IYY4 767 aaKnown RBP21.24■□□□□ 0.99
LETMD1-230ENST00000551477 LRRFIP2Q9Y608 721 aaKnown RBP21.24■□□□□ 0.99
LETMD1-230ENST00000551477 SCN9AQ15858 1988 aa21.24■□□□□ 0.99
LETMD1-230ENST00000551477 USP50Q70EL3 339 aaPredicted RBP21.23■□□□□ 0.99
LETMD1-230ENST00000551477 DPF2Q92785 391 aa21.23■□□□□ 0.99
LETMD1-230ENST00000551477 ADARB2Q9NS39 739 aaKnown RBP21.23■□□□□ 0.99
LETMD1-230ENST00000551477 TNNQ9UQP3 1299 aa21.23■□□□□ 0.99
LETMD1-230ENST00000551477 RIPOR2Q9Y4F9 1068 aa21.23■□□□□ 0.99
LETMD1-230ENST00000551477 H7C1D1 291 aa21.22■□□□□ 0.99
LETMD1-230ENST00000551477 VIL1P09327 827 aaKnown RBP21.22■□□□□ 0.99
LETMD1-230ENST00000551477 MS4A1P11836 297 aa21.22■□□□□ 0.99
LETMD1-230ENST00000551477 TMEM57Q8N5G2 664 aa21.22■□□□□ 0.99
LETMD1-230ENST00000551477 PUS3Q9BZE2 481 aaKnown RBP21.22■□□□□ 0.99
LETMD1-230ENST00000551477 KCNQ5Q9NR82 932 aa21.22■□□□□ 0.99
LETMD1-230ENST00000551477 CNOT7Q9UIV1 285 aaKnown RBP21.22■□□□□ 0.99
LETMD1-230ENST00000551477 USP17L3A6NCW0 530 aa21.21■□□□□ 0.99
LETMD1-230ENST00000551477 USP17L4A6NCW7 530 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms