RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 GOLGA2Q08379 1002 aa23.19■■□□□ 1.3
PRPF40B-215ENST00000551418 RBM26Q5T8P6 1007 aaKnown RBP23.19■■□□□ 1.3
PRPF40B-215ENST00000551418 CDC37L1Q7L3B6 337 aa23.19■■□□□ 1.3
PRPF40B-215ENST00000551418 ZIC5Q96T25 663 aa23.19■■□□□ 1.3
PRPF40B-215ENST00000551418 GNAI1P63096 354 aa23.18■■□□□ 1.3
PRPF40B-215ENST00000551418 CCDC184Q52MB2 194 aa23.18■■□□□ 1.3
PRPF40B-215ENST00000551418 TSPYL6Q8N831 410 aa23.18■■□□□ 1.3
PRPF40B-215ENST00000551418 DPF2Q92785 391 aa23.18■■□□□ 1.3
PRPF40B-215ENST00000551418 MAP2K2P36507 400 aa23.16■■□□□ 1.3
PRPF40B-215ENST00000551418 ABHD8Q96I13 439 aa23.16■■□□□ 1.3
PRPF40B-215ENST00000551418 ASTN2O75129 1339 aaPredicted RBP23.15■■□□□ 1.3
PRPF40B-215ENST00000551418 WTIPA6NIX2 430 aaPredicted RBP23.15■■□□□ 1.3
PRPF40B-215ENST00000551418 PCCAP05165 728 aaPredicted RBP23.15■■□□□ 1.3
PRPF40B-215ENST00000551418 EYA3Q99504 573 aa23.15■■□□□ 1.3
PRPF40B-215ENST00000551418 BEGAINQ9BUH8 593 aa23.15■■□□□ 1.3
PRPF40B-215ENST00000551418 ADM5C9JUS6 153 aa23.14■■□□□ 1.29
PRPF40B-215ENST00000551418 UFL1O94874 794 aa23.14■■□□□ 1.29
PRPF40B-215ENST00000551418 CCDC191Q8NCU4 936 aa23.14■■□□□ 1.29
PRPF40B-215ENST00000551418 METTL22Q9BUU2 404 aaPredicted RBP23.14■■□□□ 1.29
PRPF40B-215ENST00000551418 ZC3H12CQ9C0D7 883 aaKnown RBP23.14■■□□□ 1.29
PRPF40B-215ENST00000551418 PODXL2Q9NZ53 605 aa23.14■■□□□ 1.29
PRPF40B-215ENST00000551418 CASP8AP2Q9UKL3 1982 aa23.13■■□□□ 1.29
PRPF40B-215ENST00000551418 KRT26Q7Z3Y9 468 aa23.13■■□□□ 1.29
PRPF40B-215ENST00000551418 TSR2Q969E8 191 aaKnown RBP23.13■■□□□ 1.29
PRPF40B-215ENST00000551418 HHIPL1Q96JK4 782 aa23.13■■□□□ 1.29
PRPF40B-215ENST00000551418 CWC25Q9NXE8 425 aaPredicted RBP23.13■■□□□ 1.29
PRPF40B-215ENST00000551418 ANKIB1Q9P2G1 1089 aa23.13■■□□□ 1.29
PRPF40B-215ENST00000551418 PDE8AO60658 829 aa23.12■■□□□ 1.29
PRPF40B-215ENST00000551418 VIL1P09327 827 aaKnown RBP23.12■■□□□ 1.29
PRPF40B-215ENST00000551418 MAP3K2Q9Y2U5 619 aa23.12■■□□□ 1.29
PRPF40B-215ENST00000551418 IGKV5-2P06315 115 aa23.11■■□□□ 1.29
PRPF40B-215ENST00000551418 RPS12P25398 132 aaKnown RBP23.11■■□□□ 1.29
PRPF40B-215ENST00000551418 HUNKP57058 714 aa23.11■■□□□ 1.29
PRPF40B-215ENST00000551418 CALD1Q05682 793 aaKnown RBP23.11■■□□□ 1.29
PRPF40B-215ENST00000551418 GGA1Q9UJY5 639 aa23.11■■□□□ 1.29
PRPF40B-215ENST00000551418 CCDC152Q4G0S7 254 aa23.1■■□□□ 1.29
PRPF40B-215ENST00000551418 CCDC30Q5VVM6 783 aa23.1■■□□□ 1.29
PRPF40B-215ENST00000551418 PI4KAP2A4QPH2 592 aa23.09■■□□□ 1.29
PRPF40B-215ENST00000551418 KIF4BQ2VIQ3 1234 aa23.09■■□□□ 1.29
PRPF40B-215ENST00000551418 G2E3Q7L622 706 aa23.09■■□□□ 1.29
PRPF40B-215ENST00000551418 PI4KAP1Q8N8J0 262 aa23.09■■□□□ 1.29
PRPF40B-215ENST00000551418 BRPF1P55201 1214 aaPredicted RBP23.08■■□□□ 1.29
PRPF40B-215ENST00000551418 DCPSQ96C86 337 aaKnown RBP23.08■■□□□ 1.29
PRPF40B-215ENST00000551418 FAM155AB1AL88 458 aaPredicted RBP23.07■■□□□ 1.28
PRPF40B-215ENST00000551418 G3V3G9 751 aa23.07■■□□□ 1.28
PRPF40B-215ENST00000551418 CWF19L2Q2TBE0 894 aaKnown RBP23.07■■□□□ 1.28
PRPF40B-215ENST00000551418 DCAF8Q5TAQ9 597 aa23.07■■□□□ 1.28
PRPF40B-215ENST00000551418 KSR2Q6VAB6 950 aa23.07■■□□□ 1.28
PRPF40B-215ENST00000551418 ANKRD18AQ8IVF6 992 aa23.07■■□□□ 1.28
PRPF40B-215ENST00000551418 GBA2Q9HCG7 927 aaPredicted RBP23.07■■□□□ 1.28
PRPF40B-215ENST00000551418 GGA3Q9NZ52 723 aa23.07■■□□□ 1.28
PRPF40B-215ENST00000551418 SPEF2Q9C093 1822 aa23.07■■□□□ 1.28
PRPF40B-215ENST00000551418 DDX58O95786 925 aaKnown RBP23.06■■□□□ 1.28
PRPF40B-215ENST00000551418 TTLL11Q8NHH1 800 aa23.06■■□□□ 1.28
PRPF40B-215ENST00000551418 SCAF8Q9UPN6 1271 aaKnown RBP23.06■■□□□ 1.28
PRPF40B-215ENST00000551418 PSME4Q14997 1843 aa23.05■■□□□ 1.28
PRPF40B-215ENST00000551418 HSP90B1P14625 803 aaKnown RBP23.05■■□□□ 1.28
PRPF40B-215ENST00000551418 CTSWP56202 376 aa23.05■■□□□ 1.28
PRPF40B-215ENST00000551418 RGMBQ6NW40 437 aa23.05■■□□□ 1.28
PRPF40B-215ENST00000551418 RSBN1LQ6PCB5 846 aaPredicted RBP23.05■■□□□ 1.28
PRPF40B-215ENST00000551418 GMLQ99445 158 aa23.05■■□□□ 1.28
PRPF40B-215ENST00000551418 GREM2Q9H772 168 aa23.05■■□□□ 1.28
PRPF40B-215ENST00000551418 XDHP47989 1333 aa23.05■■□□□ 1.28
PRPF40B-215ENST00000551418 CCDC85CA6NKD9 419 aa23.04■■□□□ 1.28
PRPF40B-215ENST00000551418 ZNF280AP59817 542 aaPredicted RBP23.04■■□□□ 1.28
PRPF40B-215ENST00000551418 NOGQ13253 232 aa23.04■■□□□ 1.28
PRPF40B-215ENST00000551418 SCARF1Q14162 830 aa23.04■■□□□ 1.28
PRPF40B-215ENST00000551418 C2orf69Q8N8R5 385 aa23.04■■□□□ 1.28
PRPF40B-215ENST00000551418 MXD3Q9BW11 206 aa23.04■■□□□ 1.28
PRPF40B-215ENST00000551418 ANGEL2Q5VTE6 544 aaKnown RBP23.03■■□□□ 1.28
PRPF40B-215ENST00000551418 WWC1Q8IX03 1113 aa23.03■■□□□ 1.28
PRPF40B-215ENST00000551418 MINPP1Q9UNW1 487 aa23.03■■□□□ 1.28
PRPF40B-215ENST00000551418 MYH3P11055 1940 aa23.03■■□□□ 1.28
PRPF40B-215ENST00000551418 NEURL1BA8MQ27 555 aa23.02■■□□□ 1.28
PRPF40B-215ENST00000551418 CA12O43570 354 aa23.02■■□□□ 1.28
PRPF40B-215ENST00000551418 ATP2B4P23634 1241 aa23.02■■□□□ 1.28
PRPF40B-215ENST00000551418 KIF23Q02241 960 aaPredicted RBP23.02■■□□□ 1.28
PRPF40B-215ENST00000551418 AGBL3Q8NEM8 1001 aa23.02■■□□□ 1.28
PRPF40B-215ENST00000551418 CDCA5Q96FF9 252 aa23.02■■□□□ 1.28
PRPF40B-215ENST00000551418 MCOLN1Q9GZU1 580 aa23.02■■□□□ 1.28
PRPF40B-215ENST00000551418 TXNRD3Q86VQ6 643 aa23.01■■□□□ 1.27
PRPF40B-215ENST00000551418 SULF1Q8IWU6 871 aa23.01■■□□□ 1.27
PRPF40B-215ENST00000551418 USP17L3A6NCW0 530 aa23■■□□□ 1.27
PRPF40B-215ENST00000551418 USP17L4A6NCW7 530 aa23■■□□□ 1.27
PRPF40B-215ENST00000551418 H7C1W4 665 aa23■■□□□ 1.27
PRPF40B-215ENST00000551418 SLC4A2P04920 1241 aa23■■□□□ 1.27
PRPF40B-215ENST00000551418 ZNF157P51786 506 aaPredicted RBP23■■□□□ 1.27
PRPF40B-215ENST00000551418 TWISTNBQ3B726 338 aaPredicted RBP23■■□□□ 1.27
PRPF40B-215ENST00000551418 FAM161AQ3B820 660 aa23■■□□□ 1.27
PRPF40B-215ENST00000551418 USP17L1Q7RTZ2 530 aa23■■□□□ 1.27
PRPF40B-215ENST00000551418 UBE3BQ7Z3V4 1068 aa23■■□□□ 1.27
PRPF40B-215ENST00000551418 BSDC1Q9NW68 430 aaPredicted RBP23■■□□□ 1.27
PRPF40B-215ENST00000551418 ZNF646O15015 1829 aaPredicted RBP23■■□□□ 1.27
PRPF40B-215ENST00000551418 USP17L8P0C7I0 530 aa22.99■■□□□ 1.27
PRPF40B-215ENST00000551418 PRAMEF18Q5VWM3 479 aa22.99■■□□□ 1.27
PRPF40B-215ENST00000551418 CDC5LQ99459 802 aaKnown RBP22.99■■□□□ 1.27
PRPF40B-215ENST00000551418 STK31Q9BXU1 1019 aa22.99■■□□□ 1.27
PRPF40B-215ENST00000551418 MYOZ2Q9NPC6 264 aa22.99■■□□□ 1.27
PRPF40B-215ENST00000551418 ZNF609O15014 1411 aa22.99■■□□□ 1.27
PRPF40B-215ENST00000551418 NEXNQ0ZGT2 675 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms