RNA–Protein interactions for RNA: ENST00000551317.5

EFCAB2-216, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 3

Gene EFCAB2, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-216ENST00000551317 ITGA6P23229 1130 aa9.46□□□□□ -0.9
EFCAB2-216ENST00000551317 SF3B3Q15393 1217 aaKnown RBP9.46□□□□□ -0.9
EFCAB2-216ENST00000551317 ATG9AQ7Z3C6 839 aa9.46□□□□□ -0.9
EFCAB2-216ENST00000551317 KLHDC4Q8TBB5 520 aa9.46□□□□□ -0.9
EFCAB2-216ENST00000551317 PI4K2BQ8TCG2 481 aa9.46□□□□□ -0.9
EFCAB2-216ENST00000551317 RNF25Q96BH1 459 aaPredicted RBP9.46□□□□□ -0.9
EFCAB2-216ENST00000551317 GREM2Q9H772 168 aa9.46□□□□□ -0.9
EFCAB2-216ENST00000551317 WDR70Q9NW82 654 aa9.46□□□□□ -0.9
EFCAB2-216ENST00000551317 KIF13BQ9NQT8 1826 aa9.46□□□□□ -0.9
EFCAB2-216ENST00000551317 AKAP11Q9UKA4 1901 aa9.46□□□□□ -0.9
EFCAB2-216ENST00000551317 ERC2O15083 957 aa9.45□□□□□ -0.9
EFCAB2-216ENST00000551317 CDC45O75419 566 aa9.45□□□□□ -0.9
EFCAB2-216ENST00000551317 GLRX3O76003 335 aaKnown RBP9.45□□□□□ -0.9
EFCAB2-216ENST00000551317 HMGB1P09429 215 aaKnown RBP9.45□□□□□ -0.9
EFCAB2-216ENST00000551317 IFIT2P09913 472 aaKnown RBP9.45□□□□□ -0.9
EFCAB2-216ENST00000551317 BAG6P46379 1132 aa9.45□□□□□ -0.9
EFCAB2-216ENST00000551317 TNNI3KQ59H18 835 aa9.45□□□□□ -0.9
EFCAB2-216ENST00000551317 TAF7LQ5H9L4 462 aa9.45□□□□□ -0.9
EFCAB2-216ENST00000551317 C16orf71Q8IYS4 520 aaPredicted RBP9.45□□□□□ -0.9
EFCAB2-216ENST00000551317 SYNE4Q8N205 404 aa9.45□□□□□ -0.9
EFCAB2-216ENST00000551317 CAMKK2Q96RR4 588 aa9.45□□□□□ -0.9
EFCAB2-216ENST00000551317 SIL1Q9H173 461 aa9.45□□□□□ -0.9
EFCAB2-216ENST00000551317 FPGT-TNNI3KV9GXZ4 949 aa9.45□□□□□ -0.9
EFCAB2-216ENST00000551317 MAST2Q6P0Q8 1798 aa9.45□□□□□ -0.9
EFCAB2-216ENST00000551317 CDK11BP21127 795 aaKnown RBP9.44□□□□□ -0.9
EFCAB2-216ENST00000551317 NFIXQ14938 502 aa9.44□□□□□ -0.9
EFCAB2-216ENST00000551317 ERFEQ4G0M1 354 aa9.44□□□□□ -0.9
EFCAB2-216ENST00000551317 TPTE2Q6XPS3 522 aa9.44□□□□□ -0.9
EFCAB2-216ENST00000551317 AACSQ86V21 672 aa9.44□□□□□ -0.9
EFCAB2-216ENST00000551317 NBPF5PQ86XG9 351 aaPredicted RBP9.44□□□□□ -0.9
EFCAB2-216ENST00000551317 NUTM1Q86Y26 1132 aa9.44□□□□□ -0.9
EFCAB2-216ENST00000551317 CCDC125Q86Z20 511 aa9.44□□□□□ -0.9
EFCAB2-216ENST00000551317 EAF2Q96CJ1 260 aaPredicted RBP9.44□□□□□ -0.9
EFCAB2-216ENST00000551317 CDC5LQ99459 802 aaKnown RBP9.44□□□□□ -0.9
EFCAB2-216ENST00000551317 ECHDC1Q9NTX5 307 aa9.44□□□□□ -0.9
EFCAB2-216ENST00000551317 PNPLA7Q6ZV29 1317 aa9.44□□□□□ -0.9
EFCAB2-216ENST00000551317 DUOX1Q9NRD9 1551 aa9.44□□□□□ -0.9
EFCAB2-216ENST00000551317 CACNA1SQ13698 1873 aa9.44□□□□□ -0.9
EFCAB2-216ENST00000551317 KIAA1551Q9HCM1 1747 aa9.43□□□□□ -0.9
EFCAB2-216ENST00000551317 MROH5Q6ZUA9 1318 aa9.43□□□□□ -0.9
EFCAB2-216ENST00000551317 HCLS1P14317 486 aaPredicted RBP9.43□□□□□ -0.9
EFCAB2-216ENST00000551317 SDSP20132 328 aa9.43□□□□□ -0.9
EFCAB2-216ENST00000551317 TM4SF1P30408 202 aa9.43□□□□□ -0.9
EFCAB2-216ENST00000551317 TFCP2Q12800 502 aa9.43□□□□□ -0.9
EFCAB2-216ENST00000551317 SF3B2Q13435 895 aaKnown RBP9.43□□□□□ -0.9
EFCAB2-216ENST00000551317 LRRC24Q50LG9 513 aa9.43□□□□□ -0.9
EFCAB2-216ENST00000551317 VGLL2Q8N8G2 317 aa9.43□□□□□ -0.9
EFCAB2-216ENST00000551317 CNBD1Q8NA66 436 aa9.43□□□□□ -0.9
EFCAB2-216ENST00000551317 TFCP2L1Q9NZI6 479 aa9.43□□□□□ -0.9
EFCAB2-216ENST00000551317 AKAP2Q9Y2D5 859 aa9.43□□□□□ -0.9
EFCAB2-216ENST00000551317 RBM19Q9Y4C8 960 aaKnown RBP9.43□□□□□ -0.9
EFCAB2-216ENST00000551317 RIPOR2Q9Y4F9 1068 aa9.43□□□□□ -0.9
EFCAB2-216ENST00000551317 POLRMTO00411 1230 aaKnown RBP9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 RAD21O60216 631 aa9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 IGHMBP2P38935 993 aaKnown RBP9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 ST5P78524 1137 aa9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 EZH2Q15910 746 aaKnown RBP9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 CASC1Q6TDU7 716 aa9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 LDHAL6AQ6ZMR3 332 aa9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 TBC1D9Q6ZT07 1266 aa9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 SMIM5Q71RC9 77 aa9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 TICAM2Q86XR7 235 aa9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 CNTROBQ8N137 903 aa9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 NLGN1Q8N2Q7 840 aa9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 ZNF594Q96JF6 807 aaPredicted RBP9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 NLRP3Q96P20 1036 aa9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 ANO8Q9HCE9 1232 aaPredicted RBP9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 CEP126Q9P2H0 1117 aa9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 DBNLQ9UJU6 430 aaKnown RBP9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.42□□□□□ -0.9
EFCAB2-216ENST00000551317 FAM177BA6PVY3 158 aa9.41□□□□□ -0.9
EFCAB2-216ENST00000551317 GTF2E1P29083 439 aaPredicted RBP9.41□□□□□ -0.9
EFCAB2-216ENST00000551317 EN1Q05925 392 aaPredicted RBP9.41□□□□□ -0.9
EFCAB2-216ENST00000551317 SLC15A2Q16348 729 aa9.41□□□□□ -0.9
EFCAB2-216ENST00000551317 CRY2Q49AN0 593 aa9.41□□□□□ -0.9
EFCAB2-216ENST00000551317 TSHZ3Q63HK5 1081 aa9.41□□□□□ -0.9
EFCAB2-216ENST00000551317 PRR5LQ6MZQ0 368 aa9.41□□□□□ -0.9
EFCAB2-216ENST00000551317 BICDL1Q6ZP65 573 aa9.41□□□□□ -0.9
EFCAB2-216ENST00000551317 COL23A1Q86Y22 540 aaPredicted RBP9.41□□□□□ -0.9
EFCAB2-216ENST00000551317 PUS3Q9BZE2 481 aaKnown RBP9.41□□□□□ -0.9
EFCAB2-216ENST00000551317 UPF2Q9HAU5 1272 aaKnown RBP9.41□□□□□ -0.9
EFCAB2-216ENST00000551317 CNNM1Q9NRU3 951 aa9.41□□□□□ -0.9
EFCAB2-216ENST00000551317 STK32BQ9NY57 414 aa9.41□□□□□ -0.9
EFCAB2-216ENST00000551317 TLR7Q9NYK1 1049 aaKnown RBP9.41□□□□□ -0.9
EFCAB2-216ENST00000551317 A0A1B0GUL7 405 aa9.4□□□□□ -0.9
EFCAB2-216ENST00000551317 STK25O00506 426 aa9.4□□□□□ -0.9
EFCAB2-216ENST00000551317 EPB41L2O43491 1005 aaKnown RBP9.4□□□□□ -0.9
EFCAB2-216ENST00000551317 PDE8BO95263 885 aa9.4□□□□□ -0.9
EFCAB2-216ENST00000551317 ATP5JP18859 108 aa9.4□□□□□ -0.9
EFCAB2-216ENST00000551317 DDR1Q08345 913 aa9.4□□□□□ -0.9
EFCAB2-216ENST00000551317 PUM3Q15397 648 aaKnown RBP9.4□□□□□ -0.9
EFCAB2-216ENST00000551317 ATP2B3Q16720 1220 aa9.4□□□□□ -0.9
EFCAB2-216ENST00000551317 METTL24Q5JXM2 366 aa9.4□□□□□ -0.9
EFCAB2-216ENST00000551317 ILDR1Q86SU0 546 aaPredicted RBP9.4□□□□□ -0.9
EFCAB2-216ENST00000551317 ANKRD18AQ8IVF6 992 aa9.4□□□□□ -0.9
EFCAB2-216ENST00000551317 IL27Q8NEV9 243 aa9.4□□□□□ -0.9
EFCAB2-216ENST00000551317 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
EFCAB2-216ENST00000551317 MPHOSPH8Q99549 860 aa9.4□□□□□ -0.9
EFCAB2-216ENST00000551317 RYDENQ9NUL5 291 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms