RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 EYA1Q99502 592 aa14.27□□□□□ -0.12
ERBB3-219ENST00000551242 CCDC8Q9H0W5 538 aaPredicted RBP14.27□□□□□ -0.12
ERBB3-219ENST00000551242 BIN1O00499 593 aa14.27□□□□□ -0.13
ERBB3-219ENST00000551242 ME1P48163 572 aa14.27□□□□□ -0.13
ERBB3-219ENST00000551242 ZSCAN26Q16670 478 aa14.27□□□□□ -0.13
ERBB3-219ENST00000551242 FAM177A1Q8N128 213 aaPredicted RBP14.27□□□□□ -0.13
ERBB3-219ENST00000551242 CCDC191Q8NCU4 936 aa14.27□□□□□ -0.13
ERBB3-219ENST00000551242 ENGASEQ8NFI3 743 aa14.27□□□□□ -0.13
ERBB3-219ENST00000551242 IL17REQ8NFR9 667 aa14.27□□□□□ -0.13
ERBB3-219ENST00000551242 GPATCH3Q96I76 525 aa14.27□□□□□ -0.13
ERBB3-219ENST00000551242 BOLA2Q9H3K6 86 aa14.27□□□□□ -0.13
ERBB3-219ENST00000551242 PEAK1Q9H792 1746 aa14.26□□□□□ -0.13
ERBB3-219ENST00000551242 CRYBG1Q9Y4K1 1723 aa14.26□□□□□ -0.13
ERBB3-219ENST00000551242 TADA3O75528 432 aa14.26□□□□□ -0.13
ERBB3-219ENST00000551242 TBC1D8O95759 1140 aa14.26□□□□□ -0.13
ERBB3-219ENST00000551242 FAM160A1Q05DH4 1040 aa14.26□□□□□ -0.13
ERBB3-219ENST00000551242 SDF4Q9BRK5 362 aa14.26□□□□□ -0.13
ERBB3-219ENST00000551242 FSD1Q9BTV5 496 aa14.26□□□□□ -0.13
ERBB3-219ENST00000551242 SIL1Q9H173 461 aa14.26□□□□□ -0.13
ERBB3-219ENST00000551242 ZSCAN16Q9H4T2 348 aaPredicted RBP14.26□□□□□ -0.13
ERBB3-219ENST00000551242 IMPACTQ9P2X3 320 aa14.26□□□□□ -0.13
ERBB3-219ENST00000551242 RCOR1Q9UKL0 485 aa14.26□□□□□ -0.13
ERBB3-219ENST00000551242 GUCY1B3Q02153 619 aa14.26□□□□□ -0.13
ERBB3-219ENST00000551242 BEND3Q5T5X7 828 aa14.26□□□□□ -0.13
ERBB3-219ENST00000551242 CCDC150Q8NCX0 1101 aa14.26□□□□□ -0.13
ERBB3-219ENST00000551242 RASSF4Q9H2L5 321 aa14.26□□□□□ -0.13
ERBB3-219ENST00000551242 TLR7Q9NYK1 1049 aaKnown RBP14.26□□□□□ -0.13
ERBB3-219ENST00000551242 GNAT3A8MTJ3 354 aa14.25□□□□□ -0.13
ERBB3-219ENST00000551242 SMC1AQ14683 1233 aaKnown RBP14.25□□□□□ -0.13
ERBB3-219ENST00000551242 PTPN21Q16825 1174 aa14.25□□□□□ -0.13
ERBB3-219ENST00000551242 MUM1L1Q5H9M0 696 aa14.25□□□□□ -0.13
ERBB3-219ENST00000551242 EDC3Q96F86 508 aaKnown RBP14.25□□□□□ -0.13
ERBB3-219ENST00000551242 NAT10Q9H0A0 1025 aaKnown RBP14.25□□□□□ -0.13
ERBB3-219ENST00000551242 C3P01024 1663 aa14.25□□□□□ -0.13
ERBB3-219ENST00000551242 A0A1B0GVL5 298 aa14.25□□□□□ -0.13
ERBB3-219ENST00000551242 MYO1CO00159 1063 aa14.25□□□□□ -0.13
ERBB3-219ENST00000551242 EVCP57679 992 aa14.25□□□□□ -0.13
ERBB3-219ENST00000551242 GOLGA8FQ08AF8 430 aa14.25□□□□□ -0.13
ERBB3-219ENST00000551242 GOLGA8DPQ0D2H9 430 aa14.25□□□□□ -0.13
ERBB3-219ENST00000551242 TRIM65Q6PJ69 517 aa14.25□□□□□ -0.13
ERBB3-219ENST00000551242 Q6ZUG5 572 aa14.25□□□□□ -0.13
ERBB3-219ENST00000551242 DNAAF4Q8WXU2 420 aa14.25□□□□□ -0.13
ERBB3-219ENST00000551242 UBXN6Q9BZV1 441 aa14.25□□□□□ -0.13
ERBB3-219ENST00000551242 MON2Q7Z3U7 1717 aa14.25□□□□□ -0.13
ERBB3-219ENST00000551242 CHD2O14647 1828 aaKnown RBP14.25□□□□□ -0.13
ERBB3-219ENST00000551242 SCRN1Q12765 414 aa14.24□□□□□ -0.13
ERBB3-219ENST00000551242 EAF2Q96CJ1 260 aaPredicted RBP14.24□□□□□ -0.13
ERBB3-219ENST00000551242 CHPF2Q9P2E5 772 aa14.24□□□□□ -0.13
ERBB3-219ENST00000551242 PXDNLA1KZ92 1463 aa14.24□□□□□ -0.13
ERBB3-219ENST00000551242 SEC62Q99442 399 aaKnown RBP14.24□□□□□ -0.13
ERBB3-219ENST00000551242 METP08581 1390 aa14.24□□□□□ -0.13
ERBB3-219ENST00000551242 ACEP12821 1306 aa14.24□□□□□ -0.13
ERBB3-219ENST00000551242 CHGBP05060 677 aa14.23□□□□□ -0.13
ERBB3-219ENST00000551242 LMOD1P29536 600 aaPredicted RBP14.23□□□□□ -0.13
ERBB3-219ENST00000551242 IRX3P78415 501 aaPredicted RBP14.23□□□□□ -0.13
ERBB3-219ENST00000551242 GNL2Q13823 731 aaKnown RBP14.23□□□□□ -0.13
ERBB3-219ENST00000551242 ISM2Q6H9L7 571 aa14.23□□□□□ -0.13
ERBB3-219ENST00000551242 CC2D1AQ6P1N0 951 aaPredicted RBP14.23□□□□□ -0.13
ERBB3-219ENST00000551242 GPS2Q13227 327 aa14.23□□□□□ -0.13
ERBB3-219ENST00000551242 REXO1L1PQ8IX06 675 aa14.23□□□□□ -0.13
ERBB3-219ENST00000551242 ALDH8A1Q9H2A2 487 aaPredicted RBP14.23□□□□□ -0.13
ERBB3-219ENST00000551242 PARP3Q9Y6F1 533 aa14.23□□□□□ -0.13
ERBB3-219ENST00000551242 RGPD1P0DJD0 1748 aa14.23□□□□□ -0.13
ERBB3-219ENST00000551242 ATP1A3P13637 1013 aa14.22□□□□□ -0.13
ERBB3-219ENST00000551242 LMAN1P49257 510 aa14.22□□□□□ -0.13
ERBB3-219ENST00000551242 ZRSR1Q15695 479 aaKnown RBP14.22□□□□□ -0.13
ERBB3-219ENST00000551242 NUTM2GQ5VZR2 741 aa14.22□□□□□ -0.13
ERBB3-219ENST00000551242 NEK1Q96PY6 1258 aa14.22□□□□□ -0.13
ERBB3-219ENST00000551242 CEP170BQ9Y4F5 1589 aaPredicted RBP14.22□□□□□ -0.13
ERBB3-219ENST00000551242 PHLPP2Q6ZVD8 1323 aa14.22□□□□□ -0.13
ERBB3-219ENST00000551242 EFCAB8A8MWE9 144 aa14.22□□□□□ -0.13
ERBB3-219ENST00000551242 UTP14AQ9BVJ6 771 aaKnown RBP14.22□□□□□ -0.13
ERBB3-219ENST00000551242 OVOS2A0A0J9YW53 1432 aa14.22□□□□□ -0.13
ERBB3-219ENST00000551242 HIP1O00291 1037 aa14.22□□□□□ -0.13
ERBB3-219ENST00000551242 NRDCO43847 1150 aa14.22□□□□□ -0.13
ERBB3-219ENST00000551242 TAF5LO75529 589 aa14.22□□□□□ -0.13
ERBB3-219ENST00000551242 NDUFA8P51970 172 aa14.22□□□□□ -0.13
ERBB3-219ENST00000551242 CCT2P78371 535 aaKnown RBP14.22□□□□□ -0.13
ERBB3-219ENST00000551242 LRRFIP1Q32MZ4 808 aaKnown RBP14.22□□□□□ -0.13
ERBB3-219ENST00000551242 OVOS2Q6IE36 1432 aa14.22□□□□□ -0.13
ERBB3-219ENST00000551242 FMR1NBQ8N0W7 255 aaPredicted RBP14.22□□□□□ -0.13
ERBB3-219ENST00000551242 PCDHA7Q9UN72 937 aa14.22□□□□□ -0.13
ERBB3-219ENST00000551242 SASH1O94885 1247 aa14.21□□□□□ -0.13
ERBB3-219ENST00000551242 AMPHP49418 695 aa14.21□□□□□ -0.13
ERBB3-219ENST00000551242 CCDC158Q5M9N0 1113 aa14.21□□□□□ -0.13
ERBB3-219ENST00000551242 C9orf78Q9NZ63 289 aaPredicted RBP14.21□□□□□ -0.13
ERBB3-219ENST00000551242 NDUFB9Q9Y6M9 179 aa14.21□□□□□ -0.13
ERBB3-219ENST00000551242 MED23Q9ULK4 1368 aa14.21□□□□□ -0.13
ERBB3-219ENST00000551242 CCDC129Q6ZRS4 1044 aa14.21□□□□□ -0.14
ERBB3-219ENST00000551242 NCOA5Q9HCD5 579 aaKnown RBP14.21□□□□□ -0.14
ERBB3-219ENST00000551242 KIAA1468Q9P260 1216 aa14.21□□□□□ -0.14
ERBB3-219ENST00000551242 ADAM21Q9UKJ8 722 aa14.21□□□□□ -0.14
ERBB3-219ENST00000551242 CTDNEP1O95476 244 aa14.2□□□□□ -0.14
ERBB3-219ENST00000551242 ILDR1Q86SU0 546 aaPredicted RBP14.2□□□□□ -0.14
ERBB3-219ENST00000551242 NSUN7Q8NE18 718 aaKnown RBP14.2□□□□□ -0.14
ERBB3-219ENST00000551242 MRPS27Q92552 414 aaKnown RBP14.2□□□□□ -0.14
ERBB3-219ENST00000551242 HMG20BQ9P0W2 317 aa14.2□□□□□ -0.14
ERBB3-219ENST00000551242 CACNA1FO60840 1977 aa14.2□□□□□ -0.14
ERBB3-219ENST00000551242 KDRP35968 1356 aa14.2□□□□□ -0.14
ERBB3-219ENST00000551242 PTPDC1A2A3K4 754 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms