RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 MTX1Q13505 466 aa15.13■□□□□ 0.01
ERBB3-216ENST00000550869 HDAC1Q13547 482 aaPredicted RBP15.13■□□□□ 0.01
ERBB3-216ENST00000550869 SUSD4Q5VX71 490 aa15.13■□□□□ 0.01
ERBB3-216ENST00000550869 CEP85Q6P2H3 762 aa15.13■□□□□ 0.01
ERBB3-216ENST00000550869 ANKRD44Q8N8A2 993 aa15.13■□□□□ 0.01
ERBB3-216ENST00000550869 SUCLG2Q96I99 432 aa15.13■□□□□ 0.01
ERBB3-216ENST00000550869 PLA2G12BQ9BX93 195 aa15.13■□□□□ 0.01
ERBB3-216ENST00000550869 LRRFIP2Q9Y608 721 aaKnown RBP15.13■□□□□ 0.01
ERBB3-216ENST00000550869 CDHR2Q9BYE9 1310 aa15.13■□□□□ 0.01
ERBB3-216ENST00000550869 NTSR2O95665 410 aa15.12■□□□□ 0.01
ERBB3-216ENST00000550869 EIF6P56537 245 aaKnown RBP15.12■□□□□ 0.01
ERBB3-216ENST00000550869 ATP8B2P98198 1209 aa15.12■□□□□ 0.01
ERBB3-216ENST00000550869 RABL6Q3YEC7 729 aaPredicted RBP15.12■□□□□ 0.01
ERBB3-216ENST00000550869 C1orf115Q9H7X2 142 aa15.12■□□□□ 0.01
ERBB3-216ENST00000550869 TMEM88BA6NKF7 163 aa15.11■□□□□ 0.01
ERBB3-216ENST00000550869 PPEF1O14829 653 aaPredicted RBP15.11■□□□□ 0.01
ERBB3-216ENST00000550869 ITGBL1O95965 494 aaPredicted RBP15.11■□□□□ 0.01
ERBB3-216ENST00000550869 IGHDP01880 384 aa15.11■□□□□ 0.01
ERBB3-216ENST00000550869 EAPPQ56P03 285 aaPredicted RBP15.11■□□□□ 0.01
ERBB3-216ENST00000550869 B4GALNT3Q6L9W6 998 aa15.11■□□□□ 0.01
ERBB3-216ENST00000550869 UBE3BQ7Z3V4 1068 aa15.11■□□□□ 0.01
ERBB3-216ENST00000550869 NLRP3Q96P20 1036 aa15.11■□□□□ 0.01
ERBB3-216ENST00000550869 UTP14AQ9BVJ6 771 aaKnown RBP15.11■□□□□ 0.01
ERBB3-216ENST00000550869 TMX4Q9H1E5 349 aaPredicted RBP15.11■□□□□ 0.01
ERBB3-216ENST00000550869 VPS33BQ9H267 617 aa15.11■□□□□ 0.01
ERBB3-216ENST00000550869 MKRN1Q9UHC7 482 aaKnown RBP15.11■□□□□ 0.01
ERBB3-216ENST00000550869 FOXO4P98177 505 aa15.1■□□□□ 0.01
ERBB3-216ENST00000550869 EPHA10Q5JZY3 1008 aa15.1■□□□□ 0.01
ERBB3-216ENST00000550869 SLC10A5Q5PT55 438 aa15.1■□□□□ 0.01
ERBB3-216ENST00000550869 CCDC136Q96JN2 1154 aa15.1■□□□□ 0.01
ERBB3-216ENST00000550869 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
ERBB3-216ENST00000550869 LAMB2P55268 1798 aa15.09■□□□□ 0.01
ERBB3-216ENST00000550869 LMOD1P29536 600 aaPredicted RBP15.09■□□□□ 0.01
ERBB3-216ENST00000550869 POLA2Q14181 598 aa15.09■□□□□ 0.01
ERBB3-216ENST00000550869 LARGE2Q8N3Y3 721 aa15.09■□□□□ 0.01
ERBB3-216ENST00000550869 SSH3Q8TE77 659 aa15.09■□□□□ 0.01
ERBB3-216ENST00000550869 JARID2Q92833 1246 aaPredicted RBP15.09■□□□□ 0.01
ERBB3-216ENST00000550869 FAM89AQ96GI7 184 aa15.09■□□□□ 0.01
ERBB3-216ENST00000550869 TRMT112Q9UI30 125 aaKnown RBP15.09■□□□□ 0.01
ERBB3-216ENST00000550869 SH3TC1Q8TE82 1336 aa15.09■□□□□ 0.01
ERBB3-216ENST00000550869 COL4A5P29400 1685 aa15.09■□□□□ 0.01
ERBB3-216ENST00000550869 CSF1RP07333 972 aa15.08■□□□□ 0
ERBB3-216ENST00000550869 CNTROBQ8N137 903 aa15.08■□□□□ 0
ERBB3-216ENST00000550869 RWDD1Q9H446 243 aaPredicted RBP15.08■□□□□ 0
ERBB3-216ENST00000550869 BICC1Q9H694 974 aaKnown RBP15.08■□□□□ 0
ERBB3-216ENST00000550869 ATP6V0A2Q9Y487 856 aa15.08■□□□□ 0
ERBB3-216ENST00000550869 LTBP1Q14766 1721 aa15.08■□□□□ 0
ERBB3-216ENST00000550869 MYH3P11055 1940 aa15.07■□□□□ 0
ERBB3-216ENST00000550869 PNMA6EA0A0J9YXQ4 647 aa15.07■□□□□ 0
ERBB3-216ENST00000550869 IRS4O14654 1257 aaPredicted RBP15.07■□□□□ 0
ERBB3-216ENST00000550869 SMC5Q8IY18 1101 aa15.07■□□□□ 0
ERBB3-216ENST00000550869 NIM1KQ8IY84 436 aa15.07■□□□□ 0
ERBB3-216ENST00000550869 SUPT20HQ8NEM7 779 aa15.07■□□□□ 0
ERBB3-216ENST00000550869 DDX60Q8IY21 1712 aaKnown RBP15.06■□□□□ 0
ERBB3-216ENST00000550869 RASSF10A6NK89 507 aa15.06■□□□□ 0
ERBB3-216ENST00000550869 PDE8AO60658 829 aa15.06■□□□□ 0
ERBB3-216ENST00000550869 BBOX1O75936 387 aa15.06■□□□□ 0
ERBB3-216ENST00000550869 USP50Q70EL3 339 aaPredicted RBP15.06■□□□□ 0
ERBB3-216ENST00000550869 AIDAQ96BJ3 306 aa15.06■□□□□ 0
ERBB3-216ENST00000550869 RTFDC1Q9BY42 306 aaPredicted RBP15.06■□□□□ 0
ERBB3-216ENST00000550869 DCTPP1Q9H773 170 aa15.06■□□□□ 0
ERBB3-216ENST00000550869 GJA3Q9Y6H8 435 aa15.06■□□□□ 0
ERBB3-216ENST00000550869 TRPM7Q96QT4 1865 aa15.06■□□□□ 0
ERBB3-216ENST00000550869 PPIP5K2O43314 1243 aa15.05■□□□□ -0
ERBB3-216ENST00000550869 HMMRO75330 724 aa15.05■□□□□ -0
ERBB3-216ENST00000550869 RFX5P48382 616 aaPredicted RBP15.05■□□□□ -0
ERBB3-216ENST00000550869 VEGFBP49765 207 aa15.05■□□□□ -0
ERBB3-216ENST00000550869 SCNN1DP51172 638 aa15.05■□□□□ -0
ERBB3-216ENST00000550869 MAP1SQ66K74 1059 aaPredicted RBP15.05■□□□□ -0
ERBB3-216ENST00000550869 C3orf67Q6ZVT6 689 aa15.05■□□□□ -0
ERBB3-216ENST00000550869 CENPQQ7L2Z9 268 aaPredicted RBP15.05■□□□□ -0
ERBB3-216ENST00000550869 TMC4Q7Z404 712 aa15.05■□□□□ -0
ERBB3-216ENST00000550869 PRDM10Q9NQV6 1147 aa15.05■□□□□ -0
ERBB3-216ENST00000550869 LRRC37AA6NMS7 1700 aa15.04■□□□□ -0
ERBB3-216ENST00000550869 HSP90B1P14625 803 aaKnown RBP15.04■□□□□ -0
ERBB3-216ENST00000550869 RTL5Q5HYW3 569 aaPredicted RBP15.04■□□□□ -0
ERBB3-216ENST00000550869 LMBR1LQ6UX01 489 aa15.04■□□□□ -0
ERBB3-216ENST00000550869 TTLL11Q8NHH1 800 aa15.04■□□□□ -0
ERBB3-216ENST00000550869 NOP58Q9Y2X3 529 aaKnown RBP15.04■□□□□ -0
ERBB3-216ENST00000550869 THSD7BQ9C0I4 1608 aa15.03■□□□□ -0
ERBB3-216ENST00000550869 SRGAP3O43295 1099 aa15.03■□□□□ -0
ERBB3-216ENST00000550869 CTCFP49711 727 aaPredicted RBP15.03■□□□□ -0
ERBB3-216ENST00000550869 CTSWP56202 376 aa15.03■□□□□ -0
ERBB3-216ENST00000550869 SF3B3Q15393 1217 aaKnown RBP15.03■□□□□ -0
ERBB3-216ENST00000550869 DEFB115Q30KQ5 88 aa15.03■□□□□ -0
ERBB3-216ENST00000550869 SP8Q8IXZ3 490 aa15.03■□□□□ -0
ERBB3-216ENST00000550869 GCC1Q96CN9 775 aa15.03■□□□□ -0
ERBB3-216ENST00000550869 ZNRF3Q9ULT6 936 aa15.03■□□□□ -0
ERBB3-216ENST00000550869 RTL9Q8NET4 1388 aa15.02■□□□□ -0
ERBB3-216ENST00000550869 FOXN1O15353 648 aa15.02■□□□□ -0
ERBB3-216ENST00000550869 AOC3Q16853 763 aa15.02■□□□□ -0
ERBB3-216ENST00000550869 DPP8Q6V1X1 898 aaPredicted RBP15.02■□□□□ -0
ERBB3-216ENST00000550869 DDX46Q7L014 1031 aaKnown RBP15.02■□□□□ -0
ERBB3-216ENST00000550869 COPRSQ9NQ92 184 aa15.02■□□□□ -0
ERBB3-216ENST00000550869 ADARB2Q9NS39 739 aaKnown RBP15.02■□□□□ -0
ERBB3-216ENST00000550869 CAPN15O75808 1086 aa15.01□□□□□ -0.01
ERBB3-216ENST00000550869 HCLS1P14317 486 aaPredicted RBP15.01□□□□□ -0.01
ERBB3-216ENST00000550869 EPS15P42566 896 aa15.01□□□□□ -0.01
ERBB3-216ENST00000550869 MAP2K1Q02750 393 aaPredicted RBP15.01□□□□□ -0.01
ERBB3-216ENST00000550869 PTPN12Q05209 780 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms