RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 CCDC68Q9H2F9 335 aa9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 NOP53Q9NZM5 478 aaKnown RBP9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 HMG20BQ9P0W2 317 aa9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 CTTNBP2NLQ9P2B4 639 aa9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 NCOA2Q15596 1464 aa9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 MACROD2A1Z1Q3 448 aa9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 CCDC151A5D8V7 595 aa9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 LMNAP02545 664 aaKnown RBP9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 GNGT1P63211 74 aa9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 CEBPZQ03701 1054 aaKnown RBP9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 CCDC184Q52MB2 194 aa9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 TRIM58Q8NG06 486 aa9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 BAG1Q99933 345 aaPredicted RBP9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 TMEM51Q9NW97 253 aa9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 PAK2Q13177 524 aa9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 MAP7D1Q3KQU3 841 aa9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 SPTLC3Q9NUV7 552 aa9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 ANKRD30BQ9BXX2 1392 aa9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 STMN1P16949 149 aa9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 AMOTL1Q8IY63 956 aa9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 HAUS1Q96CS2 278 aa9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 FAF1Q9UNN5 650 aaPredicted RBP9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 GMNNO75496 209 aa9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 SSBP05455 408 aaKnown RBP eCLIP9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 ELF1P32519 619 aa9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 CNNM3Q8NE01 707 aa9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 CCDC51Q96ER9 411 aa9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 ATAD2BQ9ULI0 1458 aa9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 C9orf78Q9NZ63 289 aaPredicted RBP9.95□□□□□ -0.82
PPFIA2-220ENST00000550584 ZNF131P52739 623 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 GKAP1Q5VSY0 366 aaPredicted RBP9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 MRPS27Q92552 414 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 MPHOSPH6Q99547 160 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 TSG101Q99816 390 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 CLSTN2Q9H4D0 955 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 IL16Q14005 1332 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 BCAS4Q8TDM0 211 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 ZNF215Q9UL58 517 aaPredicted RBP9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 FYB2Q5VWT5 728 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 CCDC102BQ68D86 513 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 TBC1D22AQ8WUA7 517 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 STAG1Q8WVM7 1258 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 SREK1Q8WXA9 508 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 PHACTR2O75167 634 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 RNF8O76064 485 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 FBLN2P98095 1184 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 ZNF569Q5MCW4 686 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 GAS2L2Q8NHY3 880 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 ANKRD24Q8TF21 1146 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 FBXO41Q8TF61 875 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 PLVAPQ9BX97 442 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 FAM114A2Q9NRY5 505 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 TFIP11Q9UBB9 837 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 MTRF1LQ9UGC7 380 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 ERBINQ96RT1 1412 aa9.94□□□□□ -0.82
PPFIA2-220ENST00000550584 FAM177BA6PVY3 158 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 MAP4K4O95819 1239 aaPredicted RBP9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 AMOTQ4VCS5 1084 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 RASIP1Q5U651 963 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 TTC19Q6DKK2 380 aaPredicted RBP9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 ANKRD7Q92527 254 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 KIF2CQ99661 725 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 PPP1R12CQ9BZL4 782 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 IGHDP01880 384 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 MYCNP04198 464 aaPredicted RBP9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 ATP2B3Q16720 1220 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 WASHC4Q2M389 1173 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 C20orf194Q5TEA3 1177 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 AOPEPQ8N6M6 819 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 DNAJC25Q9H1X3 360 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 CNPY2Q9Y2B0 182 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 PTPRCP08575 1304 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 RHOXF2BP0C7M4 288 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 TMED1Q13445 227 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 RHOXF2Q9BQY4 288 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 ZSWIM4Q9H7M6 989 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 BMP15O95972 392 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 RANBP1P43487 201 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 PNMA8AQ86V59 439 aaPredicted RBP9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 NME8Q8N427 588 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 TPX2Q9ULW0 747 aaKnown RBP9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 CASKIN1Q8WXD9 1431 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 NDC80O14777 642 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 KIF5AQ12840 1032 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 E2F4Q16254 413 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 GRIPAP1Q4V328 841 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 CCDC63Q8NA47 563 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 JAKMIP2Q96AA8 810 aa9.93□□□□□ -0.82
PPFIA2-220ENST00000550584 FHOD3Q2V2M9 1422 aa9.92□□□□□ -0.82
PPFIA2-220ENST00000550584 KIAA1107Q9UPP5 1409 aa9.92□□□□□ -0.82
PPFIA2-220ENST00000550584 A0A1W2PRG0 241 aa9.92□□□□□ -0.82
PPFIA2-220ENST00000550584 RASSF10A6NK89 507 aa9.92□□□□□ -0.82
PPFIA2-220ENST00000550584 AKR1B15C9JRZ8 316 aaPredicted RBP9.92□□□□□ -0.82
PPFIA2-220ENST00000550584 SOX12O15370 315 aa9.92□□□□□ -0.82
PPFIA2-220ENST00000550584 SKIP12755 728 aa9.92□□□□□ -0.82
PPFIA2-220ENST00000550584 ETF1P62495 437 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-220ENST00000550584 KIAA0753Q2KHM9 967 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms