RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 RPS12P25398 132 aaKnown RBP22.29■■□□□ 1.16
HCFC2-205ENST00000550444 RGMBQ6NW40 437 aa22.29■■□□□ 1.16
HCFC2-205ENST00000550444 RIC3Q7Z5B4 369 aa22.29■■□□□ 1.16
HCFC2-205ENST00000550444 TBC1D16Q8TBP0 767 aa22.29■■□□□ 1.16
HCFC2-205ENST00000550444 ZC3H12CQ9C0D7 883 aaKnown RBP22.29■■□□□ 1.16
HCFC2-205ENST00000550444 MYBBP1AQ9BQG0 1328 aaKnown RBP22.29■■□□□ 1.16
HCFC2-205ENST00000550444 DDX10Q13206 875 aaKnown RBP22.28■■□□□ 1.16
HCFC2-205ENST00000550444 RTL9Q8NET4 1388 aa22.27■■□□□ 1.16
HCFC2-205ENST00000550444 RGS19P49795 217 aa22.27■■□□□ 1.16
HCFC2-205ENST00000550444 KIF4BQ2VIQ3 1234 aa22.27■■□□□ 1.16
HCFC2-205ENST00000550444 SEC31BQ9NQW1 1179 aa22.27■■□□□ 1.16
HCFC2-205ENST00000550444 ANKIB1Q9P2G1 1089 aa22.27■■□□□ 1.16
HCFC2-205ENST00000550444 ADAMTS8Q9UP79 889 aa22.27■■□□□ 1.16
HCFC2-205ENST00000550444 ZNF157P51786 506 aaPredicted RBP22.26■■□□□ 1.15
HCFC2-205ENST00000550444 GOLGA2Q08379 1002 aa22.26■■□□□ 1.15
HCFC2-205ENST00000550444 TRIM28Q13263 835 aaKnown RBP22.26■■□□□ 1.15
HCFC2-205ENST00000550444 FAM155AB1AL88 458 aaPredicted RBP22.25■■□□□ 1.15
HCFC2-205ENST00000550444 ELL2O00472 640 aaPredicted RBP22.25■■□□□ 1.15
HCFC2-205ENST00000550444 UFL1O94874 794 aa22.25■■□□□ 1.15
HCFC2-205ENST00000550444 KIF23Q02241 960 aaPredicted RBP22.25■■□□□ 1.15
HCFC2-205ENST00000550444 SULF1Q8IWU6 871 aa22.25■■□□□ 1.15
HCFC2-205ENST00000550444 ZBTB38Q8NAP3 1195 aaPredicted RBP22.25■■□□□ 1.15
HCFC2-205ENST00000550444 CCDC102AQ96A19 550 aa22.25■■□□□ 1.15
HCFC2-205ENST00000550444 PHAXQ9H814 394 aaKnown RBP22.25■■□□□ 1.15
HCFC2-205ENST00000550444 MBIPQ9NS73 344 aa22.25■■□□□ 1.15
HCFC2-205ENST00000550444 DDX60Q8IY21 1712 aaKnown RBP22.24■■□□□ 1.15
HCFC2-205ENST00000550444 VIL1P09327 827 aaKnown RBP22.24■■□□□ 1.15
HCFC2-205ENST00000550444 JARID2Q92833 1246 aaPredicted RBP22.24■■□□□ 1.15
HCFC2-205ENST00000550444 CCDC85AQ96PX6 553 aaPredicted RBP22.24■■□□□ 1.15
HCFC2-205ENST00000550444 MYD88Q99836 296 aa22.24■■□□□ 1.15
HCFC2-205ENST00000550444 GGA3Q9NZ52 723 aa22.24■■□□□ 1.15
HCFC2-205ENST00000550444 GGA1Q9UJY5 639 aa22.24■■□□□ 1.15
HCFC2-205ENST00000550444 ASTN2O75129 1339 aaPredicted RBP22.24■■□□□ 1.15
HCFC2-205ENST00000550444 COL4A1P02462 1669 aa22.23■■□□□ 1.15
HCFC2-205ENST00000550444 CASP8AP2Q9UKL3 1982 aa22.23■■□□□ 1.15
HCFC2-205ENST00000550444 LRRC37AA6NMS7 1700 aa22.23■■□□□ 1.15
HCFC2-205ENST00000550444 HSP90B1P14625 803 aaKnown RBP22.22■■□□□ 1.15
HCFC2-205ENST00000550444 PODXL2Q9NZ53 605 aa22.22■■□□□ 1.15
HCFC2-205ENST00000550444 TRPA1O75762 1119 aa22.21■■□□□ 1.15
HCFC2-205ENST00000550444 CCDC152Q4G0S7 254 aa22.21■■□□□ 1.15
HCFC2-205ENST00000550444 SCARF1Q14162 830 aa22.2■■□□□ 1.14
HCFC2-205ENST00000550444 CDCA5Q96FF9 252 aa22.2■■□□□ 1.14
HCFC2-205ENST00000550444 RNF186Q9NXI6 227 aa22.2■■□□□ 1.14
HCFC2-205ENST00000550444 PDE8AO60658 829 aa22.19■■□□□ 1.14
HCFC2-205ENST00000550444 ANGEL2Q5VTE6 544 aaKnown RBP22.19■■□□□ 1.14
HCFC2-205ENST00000550444 RSBN1LQ6PCB5 846 aaPredicted RBP22.19■■□□□ 1.14
HCFC2-205ENST00000550444 CCDC191Q8NCU4 936 aa22.19■■□□□ 1.14
HCFC2-205ENST00000550444 SLC34A2O95436 690 aa22.18■■□□□ 1.14
HCFC2-205ENST00000550444 PCCAP05165 728 aaPredicted RBP22.18■■□□□ 1.14
HCFC2-205ENST00000550444 CWC25Q9NXE8 425 aaPredicted RBP22.18■■□□□ 1.14
HCFC2-205ENST00000550444 SAGE1Q9NXZ1 904 aa22.18■■□□□ 1.14
HCFC2-205ENST00000550444 SLC10A3P09131 477 aa22.17■■□□□ 1.14
HCFC2-205ENST00000550444 ZNF853P0CG23 659 aa22.17■■□□□ 1.14
HCFC2-205ENST00000550444 ANKRD18AQ8IVF6 992 aa22.17■■□□□ 1.14
HCFC2-205ENST00000550444 AGBL3Q8NEM8 1001 aa22.17■■□□□ 1.14
HCFC2-205ENST00000550444 CSRNP1Q96S65 589 aa22.17■■□□□ 1.14
HCFC2-205ENST00000550444 APAF1O14727 1248 aa22.16■■□□□ 1.14
HCFC2-205ENST00000550444 ZNF280AP59817 542 aaPredicted RBP22.16■■□□□ 1.14
HCFC2-205ENST00000550444 GNAI1P63096 354 aa22.16■■□□□ 1.14
HCFC2-205ENST00000550444 IFT57Q9NWB7 429 aa22.16■■□□□ 1.14
HCFC2-205ENST00000550444 XDHP47989 1333 aa22.15■■□□□ 1.14
HCFC2-205ENST00000550444 USP17L8P0C7I0 530 aa22.15■■□□□ 1.14
HCFC2-205ENST00000550444 METTL22Q9BUU2 404 aaPredicted RBP22.15■■□□□ 1.14
HCFC2-205ENST00000550444 MYOZ2Q9NPC6 264 aa22.15■■□□□ 1.14
HCFC2-205ENST00000550444 SCAF8Q9UPN6 1271 aaKnown RBP22.15■■□□□ 1.14
HCFC2-205ENST00000550444 POLR2AP24928 1970 aaKnown RBP22.15■■□□□ 1.14
HCFC2-205ENST00000550444 USP17L3A6NCW0 530 aa22.14■■□□□ 1.13
HCFC2-205ENST00000550444 USP17L4A6NCW7 530 aa22.14■■□□□ 1.13
HCFC2-205ENST00000550444 DDX58O95786 925 aaKnown RBP22.14■■□□□ 1.13
HCFC2-205ENST00000550444 ATP2B4P23634 1241 aa22.14■■□□□ 1.13
HCFC2-205ENST00000550444 USP17L1Q7RTZ2 530 aa22.14■■□□□ 1.13
HCFC2-205ENST00000550444 C8orf58Q8NAV2 365 aa22.14■■□□□ 1.13
HCFC2-205ENST00000550444 CALD1Q05682 793 aaKnown RBP22.13■■□□□ 1.13
HCFC2-205ENST00000550444 RASAL3Q86YV0 1011 aa22.13■■□□□ 1.13
HCFC2-205ENST00000550444 WTIPA6NIX2 430 aaPredicted RBP22.12■■□□□ 1.13
HCFC2-205ENST00000550444 SOX10P56693 466 aa22.12■■□□□ 1.13
HCFC2-205ENST00000550444 CCDC30Q5VVM6 783 aa22.12■■□□□ 1.13
HCFC2-205ENST00000550444 PODNQ7Z5L7 613 aa22.12■■□□□ 1.13
HCFC2-205ENST00000550444 FBXW7Q969H0 707 aa22.12■■□□□ 1.13
HCFC2-205ENST00000550444 GMLQ99445 158 aa22.12■■□□□ 1.13
HCFC2-205ENST00000550444 MAP3K2Q9Y2U5 619 aa22.12■■□□□ 1.13
HCFC2-205ENST00000550444 SCN9AQ15858 1988 aa22.12■■□□□ 1.13
HCFC2-205ENST00000550444 PRAMEF18Q5VWM3 479 aa22.11■■□□□ 1.13
HCFC2-205ENST00000550444 MOB2Q70IA6 237 aa22.11■■□□□ 1.13
HCFC2-205ENST00000550444 CDC5LQ99459 802 aaKnown RBP22.11■■□□□ 1.13
HCFC2-205ENST00000550444 UBE2Q2LH0YL09 131 aa22.1■■□□□ 1.13
HCFC2-205ENST00000550444 CTSWP56202 376 aa22.1■■□□□ 1.13
HCFC2-205ENST00000550444 FKBP1BP68106 108 aa22.1■■□□□ 1.13
HCFC2-205ENST00000550444 MXD3Q9BW11 206 aa22.1■■□□□ 1.13
HCFC2-205ENST00000550444 TTLL12Q14166 644 aaPredicted RBP22.09■■□□□ 1.13
HCFC2-205ENST00000550444 REM2Q8IYK8 340 aaPredicted RBP22.09■■□□□ 1.13
HCFC2-205ENST00000550444 NBPF9Q3BBW0 867 aa22.08■■□□□ 1.13
HCFC2-205ENST00000550444 CTU1Q7Z7A3 348 aaKnown RBP22.08■■□□□ 1.13
HCFC2-205ENST00000550444 CHMP4AQ9BY43 222 aa22.08■■□□□ 1.13
HCFC2-205ENST00000550444 MINPP1Q9UNW1 487 aa22.08■■□□□ 1.13
HCFC2-205ENST00000550444 PITPNM2Q9BZ72 1349 aa22.07■■□□□ 1.12
HCFC2-205ENST00000550444 PI4KAP2A4QPH2 592 aa22.07■■□□□ 1.12
HCFC2-205ENST00000550444 KSR2Q6VAB6 950 aa22.07■■□□□ 1.12
HCFC2-205ENST00000550444 TSPYL6Q8N831 410 aa22.07■■□□□ 1.12
HCFC2-205ENST00000550444 PI4KAP1Q8N8J0 262 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms