RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 AKR1B10O60218 316 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 CYLC1P35663 651 aaPredicted RBP18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 RAB11FIP4Q86YS3 637 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 INSRP06213 1382 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 ABCC10Q5T3U5 1492 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 METAP2P50579 478 aaKnown RBP eCLIP18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 HAND2P61296 217 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 GADD45BO75293 160 aaPredicted RBP18.08■□□□□ 0.49
RBFOX1-212ENST00000550418 RHOXF2BP0C7M4 288 aa18.08■□□□□ 0.49
RBFOX1-212ENST00000550418 GIGYF2Q6Y7W6 1299 aaKnown RBP18.08■□□□□ 0.49
RBFOX1-212ENST00000550418 RHOXF2Q9BQY4 288 aa18.08■□□□□ 0.49
RBFOX1-212ENST00000550418 LZTFL1Q9NQ48 299 aa18.08■□□□□ 0.49
RBFOX1-212ENST00000550418 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.08■□□□□ 0.49
RBFOX1-212ENST00000550418 KLF18A0A0U1RQI7 1052 aa18.08■□□□□ 0.48
RBFOX1-212ENST00000550418 ADAMTS2O95450 1211 aa18.08■□□□□ 0.48
RBFOX1-212ENST00000550418 NCOA7Q8NI08 942 aa18.08■□□□□ 0.48
RBFOX1-212ENST00000550418 ZBTB9Q96C00 473 aa18.08■□□□□ 0.48
RBFOX1-212ENST00000550418 HYPKQ9NX55 129 aa18.08■□□□□ 0.48
RBFOX1-212ENST00000550418 KDM6BO15054 1643 aa18.08■□□□□ 0.48
RBFOX1-212ENST00000550418 NCKAP5LQ9HCH0 1330 aa18.08■□□□□ 0.48
RBFOX1-212ENST00000550418 MARCKSP29966 332 aaPredicted RBP18.07■□□□□ 0.48
RBFOX1-212ENST00000550418 CCDC91Q7Z6B0 441 aa18.07■□□□□ 0.48
RBFOX1-212ENST00000550418 CTCFLQ8NI51 663 aaPredicted RBP18.07■□□□□ 0.48
RBFOX1-212ENST00000550418 TRIM21P19474 475 aaKnown RBP18.07■□□□□ 0.48
RBFOX1-212ENST00000550418 PYM1Q9BRP8 204 aaKnown RBP18.07■□□□□ 0.48
RBFOX1-212ENST00000550418 MINDY4BA8MYZ0 360 aa18.07■□□□□ 0.48
RBFOX1-212ENST00000550418 CBX8Q9HC52 389 aa18.07■□□□□ 0.48
RBFOX1-212ENST00000550418 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.07■□□□□ 0.48
RBFOX1-212ENST00000550418 ACEP12821 1306 aa18.07■□□□□ 0.48
RBFOX1-212ENST00000550418 ZNF569Q5MCW4 686 aa18.06■□□□□ 0.48
RBFOX1-212ENST00000550418 CEP57Q86XR8 500 aa18.06■□□□□ 0.48
RBFOX1-212ENST00000550418 MAP3K2Q9Y2U5 619 aa18.06■□□□□ 0.48
RBFOX1-212ENST00000550418 CFAP65Q6ZU64 1925 aaKnown RBP18.06■□□□□ 0.48
RBFOX1-212ENST00000550418 TMCO5BA8MYB1 307 aa18.06■□□□□ 0.48
RBFOX1-212ENST00000550418 CCDC144CPQ8IYA2 1237 aa18.06■□□□□ 0.48
RBFOX1-212ENST00000550418 BRD1O95696 1058 aa18.06■□□□□ 0.48
RBFOX1-212ENST00000550418 RUFY3Q7L099 469 aa18.06■□□□□ 0.48
RBFOX1-212ENST00000550418 CREB3L3Q68CJ9 461 aa18.05■□□□□ 0.48
RBFOX1-212ENST00000550418 FAM114A1Q8IWE2 563 aa18.05■□□□□ 0.48
RBFOX1-212ENST00000550418 OTUD7AQ8TE49 926 aaPredicted RBP18.05■□□□□ 0.48
RBFOX1-212ENST00000550418 HSPA2P54652 639 aa18.05■□□□□ 0.48
RBFOX1-212ENST00000550418 DMTNQ08495 405 aa18.05■□□□□ 0.48
RBFOX1-212ENST00000550418 TMEM67Q5HYA8 995 aa18.05■□□□□ 0.48
RBFOX1-212ENST00000550418 CARD6Q9BX69 1037 aa18.05■□□□□ 0.48
RBFOX1-212ENST00000550418 GSTTP1A0A1W2PQM5 241 aa18.05■□□□□ 0.48
RBFOX1-212ENST00000550418 PPP1R12BO60237 982 aaPredicted RBP18.05■□□□□ 0.48
RBFOX1-212ENST00000550418 ALG1Q9BT22 464 aa18.05■□□□□ 0.48
RBFOX1-212ENST00000550418 SLC26A6Q9BXS9 759 aa18.05■□□□□ 0.48
RBFOX1-212ENST00000550418 ABCF2Q9UG63 623 aa18.05■□□□□ 0.48
RBFOX1-212ENST00000550418 PHF8Q9UPP1 1060 aa18.05■□□□□ 0.48
RBFOX1-212ENST00000550418 ZMYM3Q14202 1370 aa18.05■□□□□ 0.48
RBFOX1-212ENST00000550418 FAM160A1Q05DH4 1040 aa18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 GBP6Q6ZN66 633 aa18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 DDX46Q7L014 1031 aaKnown RBP18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 CLSTN2Q9H4D0 955 aa18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 TTC41PQ6P2S7 1318 aa18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 A0A087WZG4 1122 aa18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 FAM76AQ8TAV0 307 aa18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 BAG1Q99933 345 aaPredicted RBP18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 RNF41Q9H4P4 317 aaPredicted RBP18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 TTC21BQ7Z4L5 1316 aa18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 ATP2B2Q01814 1243 aa18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 CCDC96Q2M329 555 aa18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 CCDC121Q6ZUS5 278 aa18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 IQCA1Q86XH1 822 aa18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 TRIM47Q96LD4 638 aa18.04■□□□□ 0.48
RBFOX1-212ENST00000550418 TNRQ92752 1358 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 CCDC194A0A1B0GVG4 234 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 AFMP43652 599 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 RRAGBQ5VZM2 374 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 ANKRD24Q8TF21 1146 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 TAOK3Q9H2K8 898 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 KRT86O43790 486 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 CPA1P15085 419 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 NLRP5P59047 1200 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 NMIQ13287 307 aaPredicted RBP18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 BLMP54132 1417 aaPredicted RBP18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 UBA7P41226 1012 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 NOP2P46087 812 aaKnown RBP18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 MYL5Q02045 173 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 ZEB2O60315 1214 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 TACC1O75410 805 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 MAP3K12Q12852 859 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 CADPS2Q86UW7 1296 aa18.03■□□□□ 0.48
RBFOX1-212ENST00000550418 MBD5Q9P267 1494 aa18.02■□□□□ 0.48
RBFOX1-212ENST00000550418 MYO1BO43795 1136 aa18.02■□□□□ 0.48
RBFOX1-212ENST00000550418 UTP14CQ5TAP6 766 aaKnown RBP18.02■□□□□ 0.48
RBFOX1-212ENST00000550418 ATL3Q6DD88 541 aa18.02■□□□□ 0.48
RBFOX1-212ENST00000550418 ANTXR1Q9H6X2 564 aa18.02■□□□□ 0.48
RBFOX1-212ENST00000550418 KRT83P78385 493 aa18.02■□□□□ 0.48
RBFOX1-212ENST00000550418 DRC1Q96MC2 740 aa18.02■□□□□ 0.48
RBFOX1-212ENST00000550418 RMND1Q9NWS8 449 aa18.02■□□□□ 0.48
RBFOX1-212ENST00000550418 MCMDC2Q4G0Z9 681 aa18.02■□□□□ 0.47
RBFOX1-212ENST00000550418 ARHGEF12Q9NZN5 1544 aa18.02■□□□□ 0.47
RBFOX1-212ENST00000550418 CETN2P41208 172 aa18.02■□□□□ 0.47
RBFOX1-212ENST00000550418 FAM173BQ6P4H8 233 aa18.02■□□□□ 0.47
RBFOX1-212ENST00000550418 SNRKQ9NRH2 765 aa18.02■□□□□ 0.47
RBFOX1-212ENST00000550418 ARFGAP2Q8N6H7 521 aa18.01■□□□□ 0.47
RBFOX1-212ENST00000550418 GUCA1BQ9UMX6 200 aa18.01■□□□□ 0.47
RBFOX1-212ENST00000550418 RAB34Q9BZG1 259 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms