RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 WDR43Q15061 677 aaKnown RBP eCLIP15.06■□□□□ 0
SMARCD1-208ENST00000550280 ZBTB38Q8NAP3 1195 aaPredicted RBP15.06■□□□□ 0
SMARCD1-208ENST00000550280 BEGAINQ9BUH8 593 aa15.06■□□□□ 0
SMARCD1-208ENST00000550280 PODXL2Q9NZ53 605 aa15.06■□□□□ 0
SMARCD1-208ENST00000550280 WTIPA6NIX2 430 aaPredicted RBP15.05■□□□□ -0
SMARCD1-208ENST00000550280 ELL2O00472 640 aaPredicted RBP15.05■□□□□ -0
SMARCD1-208ENST00000550280 VIL1P09327 827 aaKnown RBP15.05■□□□□ -0
SMARCD1-208ENST00000550280 HUNKP57058 714 aa15.05■□□□□ -0
SMARCD1-208ENST00000550280 KRT26Q7Z3Y9 468 aa15.05■□□□□ -0
SMARCD1-208ENST00000550280 C8orf58Q8NAV2 365 aa15.05■□□□□ -0
SMARCD1-208ENST00000550280 MCOLN1Q9GZU1 580 aa15.05■□□□□ -0
SMARCD1-208ENST00000550280 APAF1O14727 1248 aa15.04■□□□□ -0
SMARCD1-208ENST00000550280 RPS12P25398 132 aaKnown RBP15.04■□□□□ -0
SMARCD1-208ENST00000550280 RBM26Q5T8P6 1007 aaKnown RBP15.04■□□□□ -0
SMARCD1-208ENST00000550280 MYD88Q99836 296 aa15.04■□□□□ -0
SMARCD1-208ENST00000550280 PRKRIP1Q9H875 184 aaPredicted RBP15.04■□□□□ -0
SMARCD1-208ENST00000550280 ZNF609O15014 1411 aa15.03■□□□□ -0
SMARCD1-208ENST00000550280 CCDC85CA6NKD9 419 aa15.03■□□□□ -0
SMARCD1-208ENST00000550280 RGS19P49795 217 aa15.03■□□□□ -0
SMARCD1-208ENST00000550280 KIF4BQ2VIQ3 1234 aa15.03■□□□□ -0
SMARCD1-208ENST00000550280 RIC3Q7Z5B4 369 aa15.03■□□□□ -0
SMARCD1-208ENST00000550280 CCDC85AQ96PX6 553 aaPredicted RBP15.03■□□□□ -0
SMARCD1-208ENST00000550280 GBA2Q9HCG7 927 aaPredicted RBP15.03■□□□□ -0
SMARCD1-208ENST00000550280 IFT57Q9NWB7 429 aa15.03■□□□□ -0
SMARCD1-208ENST00000550280 CA12O43570 354 aa15.02■□□□□ -0
SMARCD1-208ENST00000550280 UFL1O94874 794 aa15.02■□□□□ -0
SMARCD1-208ENST00000550280 PCCAP05165 728 aaPredicted RBP15.02■□□□□ -0
SMARCD1-208ENST00000550280 NOGQ13253 232 aa15.02■□□□□ -0
SMARCD1-208ENST00000550280 TSPYL6Q8N831 410 aa15.02■□□□□ -0
SMARCD1-208ENST00000550280 GMLQ99445 158 aa15.02■□□□□ -0
SMARCD1-208ENST00000550280 EYA3Q99504 573 aa15.02■□□□□ -0
SMARCD1-208ENST00000550280 GGA3Q9NZ52 723 aa15.02■□□□□ -0
SMARCD1-208ENST00000550280 IGKV5-2P06315 115 aa15.01□□□□□ -0.01
SMARCD1-208ENST00000550280 ZNF280AP59817 542 aaPredicted RBP15.01□□□□□ -0.01
SMARCD1-208ENST00000550280 GOLGA2Q08379 1002 aa15.01□□□□□ -0.01
SMARCD1-208ENST00000550280 RGMBQ6NW40 437 aa15.01□□□□□ -0.01
SMARCD1-208ENST00000550280 CCDC191Q8NCU4 936 aa15.01□□□□□ -0.01
SMARCD1-208ENST00000550280 CASP8AP2Q9UKL3 1982 aa15.01□□□□□ -0.01
SMARCD1-208ENST00000550280 POLR2AP24928 1970 aaKnown RBP15□□□□□ -0.01
SMARCD1-208ENST00000550280 PDE8AO60658 829 aa15□□□□□ -0.01
SMARCD1-208ENST00000550280 KIF23Q02241 960 aaPredicted RBP15□□□□□ -0.01
SMARCD1-208ENST00000550280 METTL22Q9BUU2 404 aaPredicted RBP15□□□□□ -0.01
SMARCD1-208ENST00000550280 ZC3H12CQ9C0D7 883 aaKnown RBP15□□□□□ -0.01
SMARCD1-208ENST00000550280 GGA1Q9UJY5 639 aa15□□□□□ -0.01
SMARCD1-208ENST00000550280 GNAI1P63096 354 aa14.99□□□□□ -0.01
SMARCD1-208ENST00000550280 RSBN1LQ6PCB5 846 aaPredicted RBP14.99□□□□□ -0.01
SMARCD1-208ENST00000550280 DCPSQ96C86 337 aaKnown RBP14.99□□□□□ -0.01
SMARCD1-208ENST00000550280 CDCA5Q96FF9 252 aa14.99□□□□□ -0.01
SMARCD1-208ENST00000550280 CWC25Q9NXE8 425 aaPredicted RBP14.99□□□□□ -0.01
SMARCD1-208ENST00000550280 ANKIB1Q9P2G1 1089 aa14.99□□□□□ -0.01
SMARCD1-208ENST00000550280 SCAF8Q9UPN6 1271 aaKnown RBP14.99□□□□□ -0.01
SMARCD1-208ENST00000550280 ZNF646O15015 1829 aaPredicted RBP14.99□□□□□ -0.01
SMARCD1-208ENST00000550280 SLC10A3P09131 477 aa14.98□□□□□ -0.01
SMARCD1-208ENST00000550280 DGKZQ13574 1117 aa14.98□□□□□ -0.01
SMARCD1-208ENST00000550280 CCDC152Q4G0S7 254 aa14.98□□□□□ -0.01
SMARCD1-208ENST00000550280 CCDC184Q52MB2 194 aa14.98□□□□□ -0.01
SMARCD1-208ENST00000550280 ANGEL2Q5VTE6 544 aaKnown RBP14.98□□□□□ -0.01
SMARCD1-208ENST00000550280 C2orf69Q8N8R5 385 aa14.98□□□□□ -0.01
SMARCD1-208ENST00000550280 MAP3K2Q9Y2U5 619 aa14.98□□□□□ -0.01
SMARCD1-208ENST00000550280 PSME4Q14997 1843 aa14.98□□□□□ -0.01
SMARCD1-208ENST00000550280 ZNF157P51786 506 aaPredicted RBP14.97□□□□□ -0.01
SMARCD1-208ENST00000550280 SCARF1Q14162 830 aa14.97□□□□□ -0.01
SMARCD1-208ENST00000550280 AGBL3Q8NEM8 1001 aa14.97□□□□□ -0.01
SMARCD1-208ENST00000550280 TTLL11Q8NHH1 800 aa14.97□□□□□ -0.01
SMARCD1-208ENST00000550280 CSRNP1Q96S65 589 aa14.97□□□□□ -0.01
SMARCD1-208ENST00000550280 MXD3Q9BW11 206 aa14.97□□□□□ -0.01
SMARCD1-208ENST00000550280 RNF186Q9NXI6 227 aa14.97□□□□□ -0.01
SMARCD1-208ENST00000550280 XDHP47989 1333 aa14.96□□□□□ -0.01
SMARCD1-208ENST00000550280 CTSWP56202 376 aa14.96□□□□□ -0.01
SMARCD1-208ENST00000550280 MLLT1Q03111 559 aaPredicted RBP14.96□□□□□ -0.01
SMARCD1-208ENST00000550280 MOB2Q70IA6 237 aa14.96□□□□□ -0.01
SMARCD1-208ENST00000550280 G2E3Q7L622 706 aa14.96□□□□□ -0.01
SMARCD1-208ENST00000550280 TXNRD3Q86VQ6 643 aa14.96□□□□□ -0.01
SMARCD1-208ENST00000550280 RASAL3Q86YV0 1011 aa14.96□□□□□ -0.01
SMARCD1-208ENST00000550280 ANKRD18AQ8IVF6 992 aa14.96□□□□□ -0.01
SMARCD1-208ENST00000550280 SULF1Q8IWU6 871 aa14.96□□□□□ -0.01
SMARCD1-208ENST00000550280 TSR2Q969E8 191 aaKnown RBP14.96□□□□□ -0.01
SMARCD1-208ENST00000550280 GREM2Q9H772 168 aa14.96□□□□□ -0.01
SMARCD1-208ENST00000550280 PI4KAP2A4QPH2 592 aa14.95□□□□□ -0.02
SMARCD1-208ENST00000550280 SLC34A2O95436 690 aa14.95□□□□□ -0.02
SMARCD1-208ENST00000550280 CWF19L2Q2TBE0 894 aaKnown RBP14.95□□□□□ -0.02
SMARCD1-208ENST00000550280 PI4KAP1Q8N8J0 262 aa14.95□□□□□ -0.02
SMARCD1-208ENST00000550280 CCDC102AQ96A19 550 aa14.95□□□□□ -0.02
SMARCD1-208ENST00000550280 MYOZ2Q9NPC6 264 aa14.95□□□□□ -0.02
SMARCD1-208ENST00000550280 SAGE1Q9NXZ1 904 aa14.95□□□□□ -0.02
SMARCD1-208ENST00000550280 MINPP1Q9UNW1 487 aa14.95□□□□□ -0.02
SMARCD1-208ENST00000550280 TRPA1O75762 1119 aa14.94□□□□□ -0.02
SMARCD1-208ENST00000550280 USP17L8P0C7I0 530 aa14.94□□□□□ -0.02
SMARCD1-208ENST00000550280 ATP2B4P23634 1241 aa14.94□□□□□ -0.02
SMARCD1-208ENST00000550280 KLRK1P26718 216 aa14.94□□□□□ -0.02
SMARCD1-208ENST00000550280 NBPF9Q3BBW0 867 aa14.94□□□□□ -0.02
SMARCD1-208ENST00000550280 DACT2Q5SW24 774 aa14.94□□□□□ -0.02
SMARCD1-208ENST00000550280 CCDC30Q5VVM6 783 aa14.94□□□□□ -0.02
SMARCD1-208ENST00000550280 PRAMEF18Q5VWM3 479 aa14.94□□□□□ -0.02
SMARCD1-208ENST00000550280 KSR2Q6VAB6 950 aa14.94□□□□□ -0.02
SMARCD1-208ENST00000550280 MED23Q9ULK4 1368 aa14.94□□□□□ -0.02
SMARCD1-208ENST00000550280 USP17L3A6NCW0 530 aa14.93□□□□□ -0.02
SMARCD1-208ENST00000550280 USP17L4A6NCW7 530 aa14.93□□□□□ -0.02
SMARCD1-208ENST00000550280 NEURL1BA8MQ27 555 aa14.93□□□□□ -0.02
SMARCD1-208ENST00000550280 CASP7P55210 303 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms