RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 WWC1Q8IX03 1113 aa17.19■□□□□ 0.34
NUP188-211ENST00000550219 CHMP4AQ9BY43 222 aa17.19■□□□□ 0.34
NUP188-211ENST00000550219 THSD7BQ9C0I4 1608 aa17.18■□□□□ 0.34
NUP188-211ENST00000550219 G3V3G9 751 aa17.18■□□□□ 0.34
NUP188-211ENST00000550219 H7C1D1 291 aa17.18■□□□□ 0.34
NUP188-211ENST00000550219 CELF2O95319 508 aaKnown RBP17.18■□□□□ 0.34
NUP188-211ENST00000550219 TWISTNBQ3B726 338 aaPredicted RBP17.18■□□□□ 0.34
NUP188-211ENST00000550219 DCAF8Q5TAQ9 597 aa17.18■□□□□ 0.34
NUP188-211ENST00000550219 CYP4F22Q6NT55 531 aa17.18■□□□□ 0.34
NUP188-211ENST00000550219 TBC1D16Q8TBP0 767 aa17.18■□□□□ 0.34
NUP188-211ENST00000550219 CAPNS2Q96L46 248 aa17.18■□□□□ 0.34
NUP188-211ENST00000550219 ANKIB1Q9P2G1 1089 aa17.18■□□□□ 0.34
NUP188-211ENST00000550219 SALL2Q9Y467 1007 aaPredicted RBP17.18■□□□□ 0.34
NUP188-211ENST00000550219 PCNTO95613 3336 aa17.18■□□□□ 0.34
NUP188-211ENST00000550219 PI4KAP2A4QPH2 592 aa17.17■□□□□ 0.34
NUP188-211ENST00000550219 CTCFP49711 727 aaPredicted RBP17.17■□□□□ 0.34
NUP188-211ENST00000550219 HIRAP54198 1017 aaPredicted RBP17.17■□□□□ 0.34
NUP188-211ENST00000550219 CST9Q5W186 159 aa17.17■□□□□ 0.34
NUP188-211ENST00000550219 PI4KAP1Q8N8J0 262 aa17.17■□□□□ 0.34
NUP188-211ENST00000550219 GGA1Q9UJY5 639 aa17.17■□□□□ 0.34
NUP188-211ENST00000550219 ZBED9Q6R2W3 1325 aa17.17■□□□□ 0.34
NUP188-211ENST00000550219 SPEF2Q9C093 1822 aa17.17■□□□□ 0.34
NUP188-211ENST00000550219 RTL9Q8NET4 1388 aa17.16■□□□□ 0.34
NUP188-211ENST00000550219 ECE1P42892 770 aa17.16■□□□□ 0.34
NUP188-211ENST00000550219 NEXNQ0ZGT2 675 aa17.16■□□□□ 0.34
NUP188-211ENST00000550219 CWF19L2Q2TBE0 894 aaKnown RBP17.16■□□□□ 0.34
NUP188-211ENST00000550219 TBC1D10BQ4KMP7 808 aaPredicted RBP17.16■□□□□ 0.34
NUP188-211ENST00000550219 KSR2Q6VAB6 950 aa17.16■□□□□ 0.34
NUP188-211ENST00000550219 SAMD7Q7Z3H4 446 aa17.16■□□□□ 0.34
NUP188-211ENST00000550219 ANKRD18AQ8IVF6 992 aa17.16■□□□□ 0.34
NUP188-211ENST00000550219 ZC3H12CQ9C0D7 883 aaKnown RBP17.16■□□□□ 0.34
NUP188-211ENST00000550219 KCNQ5Q9NR82 932 aa17.16■□□□□ 0.34
NUP188-211ENST00000550219 WBP1LQ9NX94 342 aa17.16■□□□□ 0.34
NUP188-211ENST00000550219 TLL2Q9Y6L7 1015 aa17.16■□□□□ 0.34
NUP188-211ENST00000550219 IGKV5-2P06315 115 aa17.15■□□□□ 0.34
NUP188-211ENST00000550219 LBX1P52954 281 aa17.15■□□□□ 0.34
NUP188-211ENST00000550219 CTSWP56202 376 aa17.15■□□□□ 0.34
NUP188-211ENST00000550219 RBM26Q5T8P6 1007 aaKnown RBP17.15■□□□□ 0.34
NUP188-211ENST00000550219 G2E3Q7L622 706 aa17.15■□□□□ 0.34
NUP188-211ENST00000550219 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
NUP188-211ENST00000550219 MAP2K1Q02750 393 aaPredicted RBP17.14■□□□□ 0.33
NUP188-211ENST00000550219 ZC3H15Q8WU90 426 aaKnown RBP17.14■□□□□ 0.33
NUP188-211ENST00000550219 PODXL2Q9NZ53 605 aa17.14■□□□□ 0.33
NUP188-211ENST00000550219 FANCIQ9NVI1 1328 aa17.14■□□□□ 0.33
NUP188-211ENST00000550219 EGFRP00533 1210 aa17.13■□□□□ 0.33
NUP188-211ENST00000550219 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
NUP188-211ENST00000550219 HSPA8P11142 646 aaKnown RBP17.13■□□□□ 0.33
NUP188-211ENST00000550219 RPS12P25398 132 aaKnown RBP17.13■□□□□ 0.33
NUP188-211ENST00000550219 CDC37L1Q7L3B6 337 aa17.13■□□□□ 0.33
NUP188-211ENST00000550219 USP48Q86UV5 1035 aa17.13■□□□□ 0.33
NUP188-211ENST00000550219 DPF2Q92785 391 aa17.13■□□□□ 0.33
NUP188-211ENST00000550219 CDC5LQ99459 802 aaKnown RBP17.13■□□□□ 0.33
NUP188-211ENST00000550219 PRDM10Q9NQV6 1147 aa17.13■□□□□ 0.33
NUP188-211ENST00000550219 PGAP2Q9UHJ9 254 aa17.13■□□□□ 0.33
NUP188-211ENST00000550219 XDHP47989 1333 aa17.13■□□□□ 0.33
NUP188-211ENST00000550219 IL16Q14005 1332 aa17.13■□□□□ 0.33
NUP188-211ENST00000550219 SCN9AQ15858 1988 aa17.13■□□□□ 0.33
NUP188-211ENST00000550219 MYH3P11055 1940 aa17.12■□□□□ 0.33
NUP188-211ENST00000550219 NEURL1BA8MQ27 555 aa17.12■□□□□ 0.33
NUP188-211ENST00000550219 AOC2O75106 756 aa17.12■□□□□ 0.33
NUP188-211ENST00000550219 KIF4BQ2VIQ3 1234 aa17.12■□□□□ 0.33
NUP188-211ENST00000550219 DLK2Q6UY11 383 aa17.12■□□□□ 0.33
NUP188-211ENST00000550219 UBE3BQ7Z3V4 1068 aa17.12■□□□□ 0.33
NUP188-211ENST00000550219 BEGAINQ9BUH8 593 aa17.12■□□□□ 0.33
NUP188-211ENST00000550219 GREM2Q9H772 168 aa17.12■□□□□ 0.33
NUP188-211ENST00000550219 ADM5C9JUS6 153 aa17.11■□□□□ 0.33
NUP188-211ENST00000550219 FLIIQ13045 1269 aa17.11■□□□□ 0.33
NUP188-211ENST00000550219 FKBP5Q13451 457 aaPredicted RBP17.11■□□□□ 0.33
NUP188-211ENST00000550219 SAPCD2Q86UD0 394 aa17.11■□□□□ 0.33
NUP188-211ENST00000550219 YTHDC1Q96MU7 727 aaKnown RBP17.11■□□□□ 0.33
NUP188-211ENST00000550219 KRT26Q7Z3Y9 468 aa17.1■□□□□ 0.33
NUP188-211ENST00000550219 TTLL11Q8NHH1 800 aa17.1■□□□□ 0.33
NUP188-211ENST00000550219 GGA3Q9NZ52 723 aa17.1■□□□□ 0.33
NUP188-211ENST00000550219 ATP2B4P23634 1241 aa17.09■□□□□ 0.33
NUP188-211ENST00000550219 FBXW7Q969H0 707 aa17.09■□□□□ 0.33
NUP188-211ENST00000550219 DCPSQ96C86 337 aaKnown RBP17.09■□□□□ 0.33
NUP188-211ENST00000550219 TSKSQ9UJT2 592 aa17.09■□□□□ 0.33
NUP188-211ENST00000550219 ASTN2O75129 1339 aaPredicted RBP17.08■□□□□ 0.32
NUP188-211ENST00000550219 VIL1P09327 827 aaKnown RBP17.08■□□□□ 0.32
NUP188-211ENST00000550219 EXOSC9Q06265 439 aaKnown RBP17.08■□□□□ 0.32
NUP188-211ENST00000550219 RSBN1LQ6PCB5 846 aaPredicted RBP17.08■□□□□ 0.32
NUP188-211ENST00000550219 DNAAF4Q8WXU2 420 aa17.08■□□□□ 0.32
NUP188-211ENST00000550219 MYH16Q9H6N6 1097 aa17.08■□□□□ 0.32
NUP188-211ENST00000550219 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.32
NUP188-211ENST00000550219 PSME4Q14997 1843 aa17.07■□□□□ 0.32
NUP188-211ENST00000550219 MED23Q9ULK4 1368 aa17.07■□□□□ 0.32
NUP188-211ENST00000550219 WTIPA6NIX2 430 aaPredicted RBP17.07■□□□□ 0.32
NUP188-211ENST00000550219 IGHMBP2P38935 993 aaKnown RBP17.07■□□□□ 0.32
NUP188-211ENST00000550219 HUNKP57058 714 aa17.07■□□□□ 0.32
NUP188-211ENST00000550219 SLFN5Q08AF3 891 aa17.07■□□□□ 0.32
NUP188-211ENST00000550219 GCKRQ14397 625 aa17.07■□□□□ 0.32
NUP188-211ENST00000550219 FAM161AQ3B820 660 aa17.07■□□□□ 0.32
NUP188-211ENST00000550219 TRMT2AQ8IZ69 625 aaKnown RBP17.07■□□□□ 0.32
NUP188-211ENST00000550219 MINPP1Q9UNW1 487 aa17.07■□□□□ 0.32
NUP188-211ENST00000550219 E9PSI1 815 aa17.06■□□□□ 0.32
NUP188-211ENST00000550219 H7C1W4 665 aa17.06■□□□□ 0.32
NUP188-211ENST00000550219 SULF1Q8IWU6 871 aa17.06■□□□□ 0.32
NUP188-211ENST00000550219 BSDC1Q9NW68 430 aaPredicted RBP17.06■□□□□ 0.32
NUP188-211ENST00000550219 ZNF609O15014 1411 aa17.05■□□□□ 0.32
NUP188-211ENST00000550219 ITGA6P23229 1130 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms