RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 CDHR2Q9BYE9 1310 aa20.43■□□□□ 0.86
COX6A1-203ENST00000550009 HSPA1AP0DMV8 641 aaKnown RBP20.42■□□□□ 0.86
COX6A1-203ENST00000550009 HSPA1BP0DMV9 641 aaKnown RBP20.42■□□□□ 0.86
COX6A1-203ENST00000550009 CASP7P55210 303 aa20.42■□□□□ 0.86
COX6A1-203ENST00000550009 CTSWP56202 376 aa20.42■□□□□ 0.86
COX6A1-203ENST00000550009 NCBP3Q53F19 620 aaKnown RBP20.42■□□□□ 0.86
COX6A1-203ENST00000550009 COL13A1Q5TAT6 717 aaPredicted RBP20.42■□□□□ 0.86
COX6A1-203ENST00000550009 TMC4Q7Z404 712 aa20.42■□□□□ 0.86
COX6A1-203ENST00000550009 CNTNAP1P78357 1384 aa20.42■□□□□ 0.86
COX6A1-203ENST00000550009 TMEM88BA6NKF7 163 aa20.41■□□□□ 0.86
COX6A1-203ENST00000550009 H7C1W4 665 aa20.41■□□□□ 0.86
COX6A1-203ENST00000550009 ECE2O60344 883 aa20.41■□□□□ 0.86
COX6A1-203ENST00000550009 UFL1O94874 794 aa20.41■□□□□ 0.86
COX6A1-203ENST00000550009 FKBP5Q13451 457 aaPredicted RBP20.41■□□□□ 0.86
COX6A1-203ENST00000550009 CCDC152Q4G0S7 254 aa20.41■□□□□ 0.86
COX6A1-203ENST00000550009 VEGFBP49765 207 aa20.4■□□□□ 0.86
COX6A1-203ENST00000550009 GCKRQ14397 625 aa20.4■□□□□ 0.86
COX6A1-203ENST00000550009 ADARB2Q9NS39 739 aaKnown RBP20.4■□□□□ 0.86
COX6A1-203ENST00000550009 ZNF521Q96K83 1311 aa20.39■□□□□ 0.85
COX6A1-203ENST00000550009 IFFO2Q5TF58 517 aa20.39■□□□□ 0.85
COX6A1-203ENST00000550009 CST9Q5W186 159 aa20.39■□□□□ 0.85
COX6A1-203ENST00000550009 USP50Q70EL3 339 aaPredicted RBP20.39■□□□□ 0.85
COX6A1-203ENST00000550009 SAMD7Q7Z3H4 446 aa20.39■□□□□ 0.85
COX6A1-203ENST00000550009 DNAAF4Q8WXU2 420 aa20.39■□□□□ 0.85
COX6A1-203ENST00000550009 BCL2L13Q9BXK5 485 aa20.39■□□□□ 0.85
COX6A1-203ENST00000550009 GLIS2Q9BZE0 524 aaPredicted RBP20.39■□□□□ 0.85
COX6A1-203ENST00000550009 ANKIB1Q9P2G1 1089 aa20.39■□□□□ 0.85
COX6A1-203ENST00000550009 CNOT7Q9UIV1 285 aaKnown RBP20.39■□□□□ 0.85
COX6A1-203ENST00000550009 NEXNQ0ZGT2 675 aa20.38■□□□□ 0.85
COX6A1-203ENST00000550009 ANKRD18AQ8IVF6 992 aa20.38■□□□□ 0.85
COX6A1-203ENST00000550009 MICALL2Q8IY33 904 aa20.38■□□□□ 0.85
COX6A1-203ENST00000550009 PODXL2Q9NZ53 605 aa20.38■□□□□ 0.85
COX6A1-203ENST00000550009 TNIP1Q15025 636 aa20.37■□□□□ 0.85
COX6A1-203ENST00000550009 FAM161AQ3B820 660 aa20.37■□□□□ 0.85
COX6A1-203ENST00000550009 GGA1Q9UJY5 639 aa20.37■□□□□ 0.85
COX6A1-203ENST00000550009 MINPP1Q9UNW1 487 aa20.36■□□□□ 0.85
COX6A1-203ENST00000550009 ASTN2O75129 1339 aaPredicted RBP20.35■□□□□ 0.85
COX6A1-203ENST00000550009 KLRK1P26718 216 aa20.35■□□□□ 0.85
COX6A1-203ENST00000550009 TBC1D10BQ4KMP7 808 aaPredicted RBP20.35■□□□□ 0.85
COX6A1-203ENST00000550009 TXNRD3Q86VQ6 643 aa20.35■□□□□ 0.85
COX6A1-203ENST00000550009 SNAP23O00161 211 aa20.34■□□□□ 0.85
COX6A1-203ENST00000550009 EPHA10Q5JZY3 1008 aa20.34■□□□□ 0.85
COX6A1-203ENST00000550009 BEND3Q5T5X7 828 aa20.34■□□□□ 0.85
COX6A1-203ENST00000550009 RBM26Q5T8P6 1007 aaKnown RBP20.34■□□□□ 0.85
COX6A1-203ENST00000550009 EYA3Q99504 573 aa20.34■□□□□ 0.85
COX6A1-203ENST00000550009 MXD3Q9BW11 206 aa20.34■□□□□ 0.85
COX6A1-203ENST00000550009 CHMP4AQ9BY43 222 aa20.34■□□□□ 0.85
COX6A1-203ENST00000550009 ZC3H12CQ9C0D7 883 aaKnown RBP20.34■□□□□ 0.85
COX6A1-203ENST00000550009 LINS1Q8NG48 757 aa20.33■□□□□ 0.85
COX6A1-203ENST00000550009 ABT1Q9ULW3 272 aaKnown RBP20.33■□□□□ 0.85
COX6A1-203ENST00000550009 XDHP47989 1333 aa20.32■□□□□ 0.84
COX6A1-203ENST00000550009 FOXN1O15353 648 aa20.32■□□□□ 0.84
COX6A1-203ENST00000550009 ITGA6P23229 1130 aa20.32■□□□□ 0.84
COX6A1-203ENST00000550009 FOXO4P98177 505 aa20.32■□□□□ 0.84
COX6A1-203ENST00000550009 DEFB115Q30KQ5 88 aa20.32■□□□□ 0.84
COX6A1-203ENST00000550009 PLA2G12BQ9BX93 195 aa20.32■□□□□ 0.84
COX6A1-203ENST00000550009 PGAP2Q9UHJ9 254 aa20.32■□□□□ 0.84
COX6A1-203ENST00000550009 RASSF10A6NK89 507 aa20.31■□□□□ 0.84
COX6A1-203ENST00000550009 CSF1RP07333 972 aa20.31■□□□□ 0.84
COX6A1-203ENST00000550009 VIL1P09327 827 aaKnown RBP20.31■□□□□ 0.84
COX6A1-203ENST00000550009 HSP90B1P14625 803 aaKnown RBP20.31■□□□□ 0.84
COX6A1-203ENST00000550009 CYP4F22Q6NT55 531 aa20.31■□□□□ 0.84
COX6A1-203ENST00000550009 CDCA7LQ96GN5 454 aa20.31■□□□□ 0.84
COX6A1-203ENST00000550009 CDC5LQ99459 802 aaKnown RBP20.31■□□□□ 0.84
COX6A1-203ENST00000550009 MYH16Q9H6N6 1097 aa20.31■□□□□ 0.84
COX6A1-203ENST00000550009 BSDC1Q9NW68 430 aaPredicted RBP20.31■□□□□ 0.84
COX6A1-203ENST00000550009 SCAF8Q9UPN6 1271 aaKnown RBP20.31■□□□□ 0.84
COX6A1-203ENST00000550009 GRM1Q13255 1194 aa20.3■□□□□ 0.84
COX6A1-203ENST00000550009 USP48Q86UV5 1035 aa20.3■□□□□ 0.84
COX6A1-203ENST00000550009 ZNF408Q9H9D4 720 aa20.3■□□□□ 0.84
COX6A1-203ENST00000550009 THSD7BQ9C0I4 1608 aa20.29■□□□□ 0.84
COX6A1-203ENST00000550009 H7C1D1 291 aa20.29■□□□□ 0.84
COX6A1-203ENST00000550009 CELF2O95319 508 aaKnown RBP20.29■□□□□ 0.84
COX6A1-203ENST00000550009 ATP2B4P23634 1241 aa20.29■□□□□ 0.84
COX6A1-203ENST00000550009 CCT4P50991 539 aaKnown RBP20.29■□□□□ 0.84
COX6A1-203ENST00000550009 HELBQ8NG08 1087 aaPredicted RBP20.29■□□□□ 0.84
COX6A1-203ENST00000550009 DPF2Q92785 391 aa20.29■□□□□ 0.84
COX6A1-203ENST00000550009 WDR33Q9C0J8 1336 aaKnown RBP20.28■□□□□ 0.84
COX6A1-203ENST00000550009 ADM5C9JUS6 153 aa20.28■□□□□ 0.84
COX6A1-203ENST00000550009 SLC4A10Q6U841 1118 aa20.28■□□□□ 0.84
COX6A1-203ENST00000550009 ZNF594Q96JF6 807 aaPredicted RBP20.28■□□□□ 0.84
COX6A1-203ENST00000550009 G3V3G9 751 aa20.27■□□□□ 0.84
COX6A1-203ENST00000550009 AOC2O75106 756 aa20.27■□□□□ 0.84
COX6A1-203ENST00000550009 DCAF8Q5TAQ9 597 aa20.27■□□□□ 0.84
COX6A1-203ENST00000550009 GMLQ99445 158 aa20.27■□□□□ 0.84
COX6A1-203ENST00000550009 TLL2Q9Y6L7 1015 aa20.27■□□□□ 0.84
COX6A1-203ENST00000550009 TAF5LO75529 589 aa20.26■□□□□ 0.83
COX6A1-203ENST00000550009 KIF4BQ2VIQ3 1234 aa20.26■□□□□ 0.83
COX6A1-203ENST00000550009 RSBN1LQ6PCB5 846 aaPredicted RBP20.26■□□□□ 0.83
COX6A1-203ENST00000550009 PAXIP1Q6ZW49 1069 aaPredicted RBP20.26■□□□□ 0.83
COX6A1-203ENST00000550009 MRPL50Q8N5N7 158 aaKnown RBP20.26■□□□□ 0.83
COX6A1-203ENST00000550009 KAZALD1Q96I82 304 aa20.26■□□□□ 0.83
COX6A1-203ENST00000550009 CHMP3Q9Y3E7 222 aa20.26■□□□□ 0.83
COX6A1-203ENST00000550009 MED23Q9ULK4 1368 aa20.25■□□□□ 0.83
COX6A1-203ENST00000550009 IGHMBP2P38935 993 aaKnown RBP20.25■□□□□ 0.83
COX6A1-203ENST00000550009 CHRNDQ07001 517 aa20.25■□□□□ 0.83
COX6A1-203ENST00000550009 LMBR1LQ6UX01 489 aa20.25■□□□□ 0.83
COX6A1-203ENST00000550009 CAPNS2Q96L46 248 aa20.25■□□□□ 0.83
COX6A1-203ENST00000550009 RPS12P25398 132 aaKnown RBP20.24■□□□□ 0.83
COX6A1-203ENST00000550009 SLFN5Q08AF3 891 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms