RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 VEGFBP49765 207 aa17.23■□□□□ 0.35
GCN1-206ENST00000549815 CTSWP56202 376 aa17.23■□□□□ 0.35
GCN1-206ENST00000549815 EXOSC9Q06265 439 aaKnown RBP17.23■□□□□ 0.35
GCN1-206ENST00000549815 NEXNQ0ZGT2 675 aa17.23■□□□□ 0.35
GCN1-206ENST00000549815 TTLL11Q8NHH1 800 aa17.23■□□□□ 0.35
GCN1-206ENST00000549815 BCL2L13Q9BXK5 485 aa17.23■□□□□ 0.35
GCN1-206ENST00000549815 KCNQ5Q9NR82 932 aa17.23■□□□□ 0.35
GCN1-206ENST00000549815 ZBTB12Q9Y330 459 aaPredicted RBP17.23■□□□□ 0.35
GCN1-206ENST00000549815 RTL9Q8NET4 1388 aa17.23■□□□□ 0.35
GCN1-206ENST00000549815 TRAF5O00463 557 aa17.22■□□□□ 0.35
GCN1-206ENST00000549815 ECE2O60344 883 aa17.22■□□□□ 0.35
GCN1-206ENST00000549815 DOK7Q18PE1 504 aa17.22■□□□□ 0.35
GCN1-206ENST00000549815 TRPM4Q8TD43 1214 aa17.22■□□□□ 0.35
GCN1-206ENST00000549815 DPF2Q92785 391 aa17.22■□□□□ 0.35
GCN1-206ENST00000549815 CNOT7Q9UIV1 285 aaKnown RBP17.22■□□□□ 0.35
GCN1-206ENST00000549815 CASP7P55210 303 aa17.21■□□□□ 0.35
GCN1-206ENST00000549815 DEFB115Q30KQ5 88 aa17.21■□□□□ 0.35
GCN1-206ENST00000549815 CST9Q5W186 159 aa17.21■□□□□ 0.35
GCN1-206ENST00000549815 ANKRD18AQ8IVF6 992 aa17.21■□□□□ 0.35
GCN1-206ENST00000549815 ZC3H15Q8WU90 426 aaKnown RBP17.21■□□□□ 0.35
GCN1-206ENST00000549815 GGA1Q9UJY5 639 aa17.21■□□□□ 0.35
GCN1-206ENST00000549815 PSME4Q14997 1843 aa17.21■□□□□ 0.35
GCN1-206ENST00000549815 SPEF2Q9C093 1822 aa17.21■□□□□ 0.35
GCN1-206ENST00000549815 UFL1O94874 794 aa17.2■□□□□ 0.34
GCN1-206ENST00000549815 GCKRQ14397 625 aa17.2■□□□□ 0.34
GCN1-206ENST00000549815 MICALL2Q8IY33 904 aa17.2■□□□□ 0.34
GCN1-206ENST00000549815 FAM9BQ8IZU0 186 aa17.2■□□□□ 0.34
GCN1-206ENST00000549815 DNAAF4Q8WXU2 420 aa17.2■□□□□ 0.34
GCN1-206ENST00000549815 PLA2G12BQ9BX93 195 aa17.2■□□□□ 0.34
GCN1-206ENST00000549815 ZC3H12CQ9C0D7 883 aaKnown RBP17.2■□□□□ 0.34
GCN1-206ENST00000549815 GREM2Q9H772 168 aa17.2■□□□□ 0.34
GCN1-206ENST00000549815 ANKIB1Q9P2G1 1089 aa17.2■□□□□ 0.34
GCN1-206ENST00000549815 XDHP47989 1333 aa17.2■□□□□ 0.34
GCN1-206ENST00000549815 THSD7BQ9C0I4 1608 aa17.19■□□□□ 0.34
GCN1-206ENST00000549815 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
GCN1-206ENST00000549815 UBE3BQ7Z3V4 1068 aa17.19■□□□□ 0.34
GCN1-206ENST00000549815 CDC5LQ99459 802 aaKnown RBP17.19■□□□□ 0.34
GCN1-206ENST00000549815 GLIS2Q9BZE0 524 aaPredicted RBP17.19■□□□□ 0.34
GCN1-206ENST00000549815 ZNF521Q96K83 1311 aa17.19■□□□□ 0.34
GCN1-206ENST00000549815 H7C1D1 291 aa17.18■□□□□ 0.34
GCN1-206ENST00000549815 VIL1P09327 827 aaKnown RBP17.18■□□□□ 0.34
GCN1-206ENST00000549815 RPS12P25398 132 aaKnown RBP17.18■□□□□ 0.34
GCN1-206ENST00000549815 LINS1Q8NG48 757 aa17.18■□□□□ 0.34
GCN1-206ENST00000549815 BSDC1Q9NW68 430 aaPredicted RBP17.18■□□□□ 0.34
GCN1-206ENST00000549815 ABT1Q9ULW3 272 aaKnown RBP17.18■□□□□ 0.34
GCN1-206ENST00000549815 MINPP1Q9UNW1 487 aa17.18■□□□□ 0.34
GCN1-206ENST00000549815 ZNF609O15014 1411 aa17.18■□□□□ 0.34
GCN1-206ENST00000549815 WTIPA6NIX2 430 aaPredicted RBP17.17■□□□□ 0.34
GCN1-206ENST00000549815 EGFRP00533 1210 aa17.17■□□□□ 0.34
GCN1-206ENST00000549815 CSF1RP07333 972 aa17.17■□□□□ 0.34
GCN1-206ENST00000549815 ATP2B4P23634 1241 aa17.17■□□□□ 0.34
GCN1-206ENST00000549815 SAMD7Q7Z3H4 446 aa17.17■□□□□ 0.34
GCN1-206ENST00000549815 TLL2Q9Y6L7 1015 aa17.17■□□□□ 0.34
GCN1-206ENST00000549815 WDR33Q9C0J8 1336 aaKnown RBP17.17■□□□□ 0.34
GCN1-206ENST00000549815 FOXN1O15353 648 aa17.16■□□□□ 0.34
GCN1-206ENST00000549815 MYH16Q9H6N6 1097 aa17.16■□□□□ 0.34
GCN1-206ENST00000549815 WBP1LQ9NX94 342 aa17.16■□□□□ 0.34
GCN1-206ENST00000549815 ZNF646O15015 1829 aaPredicted RBP17.16■□□□□ 0.34
GCN1-206ENST00000549815 POLR2AP24928 1970 aaKnown RBP17.15■□□□□ 0.34
GCN1-206ENST00000549815 TBC1D10BQ4KMP7 808 aaPredicted RBP17.15■□□□□ 0.34
GCN1-206ENST00000549815 BEND3Q5T5X7 828 aa17.15■□□□□ 0.34
GCN1-206ENST00000549815 CDC37L1Q7L3B6 337 aa17.15■□□□□ 0.34
GCN1-206ENST00000549815 MED23Q9ULK4 1368 aa17.15■□□□□ 0.34
GCN1-206ENST00000549815 F6X3S4 739 aa17.14■□□□□ 0.33
GCN1-206ENST00000549815 CELF2O95319 508 aaKnown RBP17.14■□□□□ 0.33
GCN1-206ENST00000549815 ITGA6P23229 1130 aa17.13■□□□□ 0.33
GCN1-206ENST00000549815 CCT4P50991 539 aaKnown RBP17.13■□□□□ 0.33
GCN1-206ENST00000549815 FAM161AQ3B820 660 aa17.13■□□□□ 0.33
GCN1-206ENST00000549815 CYP4F22Q6NT55 531 aa17.13■□□□□ 0.33
GCN1-206ENST00000549815 RSBN1LQ6PCB5 846 aaPredicted RBP17.13■□□□□ 0.33
GCN1-206ENST00000549815 PODNQ7Z5L7 613 aa17.13■□□□□ 0.33
GCN1-206ENST00000549815 SAPCD2Q86UD0 394 aa17.13■□□□□ 0.33
GCN1-206ENST00000549815 CAPNS2Q96L46 248 aa17.13■□□□□ 0.33
GCN1-206ENST00000549815 GMLQ99445 158 aa17.13■□□□□ 0.33
GCN1-206ENST00000549815 G3V3G9 751 aa17.12■□□□□ 0.33
GCN1-206ENST00000549815 IGHMBP2P38935 993 aaKnown RBP17.12■□□□□ 0.33
GCN1-206ENST00000549815 ZNF280AP59817 542 aaPredicted RBP17.12■□□□□ 0.33
GCN1-206ENST00000549815 DCAF8Q5TAQ9 597 aa17.12■□□□□ 0.33
GCN1-206ENST00000549815 DLK2Q6UY11 383 aa17.12■□□□□ 0.33
GCN1-206ENST00000549815 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
GCN1-206ENST00000549815 TNS4Q8IZW8 715 aa17.12■□□□□ 0.33
GCN1-206ENST00000549815 AGBL3Q8NEM8 1001 aa17.12■□□□□ 0.33
GCN1-206ENST00000549815 A0A1B0GUL6 1792 aa17.11■□□□□ 0.33
GCN1-206ENST00000549815 FOXO4P98177 505 aa17.11■□□□□ 0.33
GCN1-206ENST00000549815 KIF4BQ2VIQ3 1234 aa17.11■□□□□ 0.33
GCN1-206ENST00000549815 RBM26Q5T8P6 1007 aaKnown RBP17.11■□□□□ 0.33
GCN1-206ENST00000549815 TXNRD3Q86VQ6 643 aa17.11■□□□□ 0.33
GCN1-206ENST00000549815 HHIPL1Q96JK4 782 aa17.11■□□□□ 0.33
GCN1-206ENST00000549815 LEMD3Q9Y2U8 911 aa17.11■□□□□ 0.33
GCN1-206ENST00000549815 USP17L3A6NCW0 530 aa17.1■□□□□ 0.33
GCN1-206ENST00000549815 USP17L4A6NCW7 530 aa17.1■□□□□ 0.33
GCN1-206ENST00000549815 ECE1P42892 770 aa17.1■□□□□ 0.33
GCN1-206ENST00000549815 USP17L1Q7RTZ2 530 aa17.1■□□□□ 0.33
GCN1-206ENST00000549815 PRDM10Q9NQV6 1147 aa17.1■□□□□ 0.33
GCN1-206ENST00000549815 CTCFP49711 727 aaPredicted RBP17.09■□□□□ 0.33
GCN1-206ENST00000549815 MAP2K1Q02750 393 aaPredicted RBP17.09■□□□□ 0.33
GCN1-206ENST00000549815 EPHA10Q5JZY3 1008 aa17.09■□□□□ 0.33
GCN1-206ENST00000549815 AIDAQ96BJ3 306 aa17.09■□□□□ 0.33
GCN1-206ENST00000549815 ZNF408Q9H9D4 720 aa17.09■□□□□ 0.33
GCN1-206ENST00000549815 ASTN2O75129 1339 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms