RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 KIF4BQ2VIQ3 1234 aa17.73■□□□□ 0.43
CDX2-202ENST00000548877 PLBD2Q8NHP8 589 aa17.73■□□□□ 0.43
CDX2-202ENST00000548877 TBC1D16Q8TBP0 767 aa17.73■□□□□ 0.43
CDX2-202ENST00000548877 PODXL2Q9NZ53 605 aa17.73■□□□□ 0.43
CDX2-202ENST00000548877 RIMBP2O15034 1052 aa17.72■□□□□ 0.43
CDX2-202ENST00000548877 SOX10P56693 466 aa17.72■□□□□ 0.43
CDX2-202ENST00000548877 ZNF280AP59817 542 aaPredicted RBP17.72■□□□□ 0.43
CDX2-202ENST00000548877 FKBP1BP68106 108 aa17.72■□□□□ 0.43
CDX2-202ENST00000548877 LMOD3Q0VAK6 560 aa17.72■□□□□ 0.43
CDX2-202ENST00000548877 PRPF38BQ5VTL8 546 aaKnown RBP17.72■□□□□ 0.43
CDX2-202ENST00000548877 SULF1Q8IWU6 871 aa17.72■□□□□ 0.43
CDX2-202ENST00000548877 NECTIN2Q92692 538 aa17.72■□□□□ 0.43
CDX2-202ENST00000548877 CHL1O00533 1208 aa17.71■□□□□ 0.43
CDX2-202ENST00000548877 TMPOP42166 694 aaKnown RBP17.71■□□□□ 0.43
CDX2-202ENST00000548877 RPS8P62241 208 aaKnown RBP17.71■□□□□ 0.43
CDX2-202ENST00000548877 RBM26Q5T8P6 1007 aaKnown RBP17.71■□□□□ 0.43
CDX2-202ENST00000548877 ANKRD13DQ6ZTN6 518 aa17.71■□□□□ 0.43
CDX2-202ENST00000548877 CDCA5Q96FF9 252 aa17.71■□□□□ 0.43
CDX2-202ENST00000548877 FAM89AQ96GI7 184 aa17.71■□□□□ 0.43
CDX2-202ENST00000548877 GGA3Q9NZ52 723 aa17.71■□□□□ 0.43
CDX2-202ENST00000548877 PAPPA2Q9BXP8 1791 aa17.71■□□□□ 0.43
CDX2-202ENST00000548877 HOXB7P09629 217 aa17.7■□□□□ 0.42
CDX2-202ENST00000548877 PKN2Q16513 984 aaKnown RBP17.7■□□□□ 0.42
CDX2-202ENST00000548877 DOK7Q18PE1 504 aa17.7■□□□□ 0.42
CDX2-202ENST00000548877 RASAL3Q86YV0 1011 aa17.7■□□□□ 0.42
CDX2-202ENST00000548877 AGBL3Q8NEM8 1001 aa17.7■□□□□ 0.42
CDX2-202ENST00000548877 NOM1Q5C9Z4 860 aaKnown RBP17.69■□□□□ 0.42
CDX2-202ENST00000548877 ZC3H12CQ9C0D7 883 aaKnown RBP17.69■□□□□ 0.42
CDX2-202ENST00000548877 CHPF2Q9P2E5 772 aa17.69■□□□□ 0.42
CDX2-202ENST00000548877 ASTN2O75129 1339 aaPredicted RBP17.69■□□□□ 0.42
CDX2-202ENST00000548877 PITPNM2Q9BZ72 1349 aa17.69■□□□□ 0.42
CDX2-202ENST00000548877 GMLQ99445 158 aa17.68■□□□□ 0.42
CDX2-202ENST00000548877 IRS4O14654 1257 aaPredicted RBP17.67■□□□□ 0.42
CDX2-202ENST00000548877 KRT24Q2M2I5 525 aa17.67■□□□□ 0.42
CDX2-202ENST00000548877 RSBN1LQ6PCB5 846 aaPredicted RBP17.67■□□□□ 0.42
CDX2-202ENST00000548877 DBF4Q9UBU7 674 aaPredicted RBP17.67■□□□□ 0.42
CDX2-202ENST00000548877 HPS5Q9UPZ3 1129 aa17.67■□□□□ 0.42
CDX2-202ENST00000548877 ATP5J2-PTCD1G3V325 749 aa17.66■□□□□ 0.42
CDX2-202ENST00000548877 SCARF1Q14162 830 aa17.66■□□□□ 0.42
CDX2-202ENST00000548877 ANGEL2Q5VTE6 544 aaKnown RBP17.66■□□□□ 0.42
CDX2-202ENST00000548877 HSP90B1P14625 803 aaKnown RBP17.65■□□□□ 0.42
CDX2-202ENST00000548877 HDGFL1Q5TGJ6 251 aa17.65■□□□□ 0.42
CDX2-202ENST00000548877 HYPKQ9NX55 129 aa17.65■□□□□ 0.42
CDX2-202ENST00000548877 TM4SF4P48230 202 aa17.64■□□□□ 0.41
CDX2-202ENST00000548877 ZBTB38Q8NAP3 1195 aaPredicted RBP17.64■□□□□ 0.41
CDX2-202ENST00000548877 GGA1Q9UJY5 639 aa17.64■□□□□ 0.41
CDX2-202ENST00000548877 UFL1O94874 794 aa17.63■□□□□ 0.41
CDX2-202ENST00000548877 USP17L8P0C7I0 530 aa17.63■□□□□ 0.41
CDX2-202ENST00000548877 ZNF428Q96B54 188 aa17.63■□□□□ 0.41
CDX2-202ENST00000548877 CFHR5Q9BXR6 569 aa17.63■□□□□ 0.41
CDX2-202ENST00000548877 MYOZ2Q9NPC6 264 aa17.63■□□□□ 0.41
CDX2-202ENST00000548877 PODNQ7Z5L7 613 aa17.62■□□□□ 0.41
CDX2-202ENST00000548877 ZNF296Q8WUU4 475 aaPredicted RBP17.62■□□□□ 0.41
CDX2-202ENST00000548877 SEC31BQ9NQW1 1179 aa17.62■□□□□ 0.41
CDX2-202ENST00000548877 ANKIB1Q9P2G1 1089 aa17.62■□□□□ 0.41
CDX2-202ENST00000548877 TRIM35Q9UPQ4 493 aa17.62■□□□□ 0.41
CDX2-202ENST00000548877 ZNF646O15015 1829 aaPredicted RBP17.61■□□□□ 0.41
CDX2-202ENST00000548877 G3V3G9 751 aa17.61■□□□□ 0.41
CDX2-202ENST00000548877 DCAF8Q5TAQ9 597 aa17.61■□□□□ 0.41
CDX2-202ENST00000548877 USP17L3A6NCW0 530 aa17.6■□□□□ 0.41
CDX2-202ENST00000548877 USP17L4A6NCW7 530 aa17.6■□□□□ 0.41
CDX2-202ENST00000548877 CCDC152Q4G0S7 254 aa17.6■□□□□ 0.41
CDX2-202ENST00000548877 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
CDX2-202ENST00000548877 FBXO46Q6PJ61 603 aaPredicted RBP17.6■□□□□ 0.41
CDX2-202ENST00000548877 USP17L1Q7RTZ2 530 aa17.6■□□□□ 0.41
CDX2-202ENST00000548877 HDAC9Q9UKV0 1011 aa17.6■□□□□ 0.41
CDX2-202ENST00000548877 XDHP47989 1333 aa17.6■□□□□ 0.41
CDX2-202ENST00000548877 GPR25O00155 361 aa17.59■□□□□ 0.41
CDX2-202ENST00000548877 PDE8AO60658 829 aa17.59■□□□□ 0.41
CDX2-202ENST00000548877 TBC1D8O95759 1140 aa17.59■□□□□ 0.41
CDX2-202ENST00000548877 PCCAP05165 728 aaPredicted RBP17.59■□□□□ 0.41
CDX2-202ENST00000548877 ATP2B4P23634 1241 aa17.59■□□□□ 0.41
CDX2-202ENST00000548877 MMP14P50281 582 aa17.59■□□□□ 0.41
CDX2-202ENST00000548877 MOB2Q70IA6 237 aa17.59■□□□□ 0.41
CDX2-202ENST00000548877 CCDC191Q8NCU4 936 aa17.59■□□□□ 0.41
CDX2-202ENST00000548877 UBE2Q2LH0YL09 131 aa17.58■□□□□ 0.4
CDX2-202ENST00000548877 RALBP1Q15311 655 aa17.58■□□□□ 0.4
CDX2-202ENST00000548877 DUSP27Q5VZP5 1158 aa17.58■□□□□ 0.4
CDX2-202ENST00000548877 RIC3Q7Z5B4 369 aa17.57■□□□□ 0.4
CDX2-202ENST00000548877 MED23Q9ULK4 1368 aa17.56■□□□□ 0.4
CDX2-202ENST00000548877 GOLGA2Q08379 1002 aa17.56■□□□□ 0.4
CDX2-202ENST00000548877 SREBF2Q12772 1141 aa17.56■□□□□ 0.4
CDX2-202ENST00000548877 NBPF9Q3BBW0 867 aa17.56■□□□□ 0.4
CDX2-202ENST00000548877 DACT2Q5SW24 774 aa17.56■□□□□ 0.4
CDX2-202ENST00000548877 ANKRD18AQ8IVF6 992 aa17.56■□□□□ 0.4
CDX2-202ENST00000548877 RUNDC1Q96C34 613 aa17.56■□□□□ 0.4
CDX2-202ENST00000548877 GCC1Q96CN9 775 aa17.56■□□□□ 0.4
CDX2-202ENST00000548877 LAS1LQ9Y4W2 734 aaKnown RBP17.56■□□□□ 0.4
CDX2-202ENST00000548877 MYO3BQ8WXR4 1341 aa17.55■□□□□ 0.4
CDX2-202ENST00000548877 WNT10BO00744 389 aa17.55■□□□□ 0.4
CDX2-202ENST00000548877 NEUROD2Q15784 382 aa17.55■□□□□ 0.4
CDX2-202ENST00000548877 LAMB1P07942 1786 aa17.55■□□□□ 0.4
CDX2-202ENST00000548877 HTTP42858 3142 aa17.54■□□□□ 0.4
CDX2-202ENST00000548877 FKTNO75072 461 aa17.54■□□□□ 0.4
CDX2-202ENST00000548877 ZNF853P0CG23 659 aa17.54■□□□□ 0.4
CDX2-202ENST00000548877 LDLRAD1Q5T700 205 aa17.54■□□□□ 0.4
CDX2-202ENST00000548877 STRIP1Q5VSL9 837 aa17.54■□□□□ 0.4
CDX2-202ENST00000548877 CWC25Q9NXE8 425 aaPredicted RBP17.54■□□□□ 0.4
CDX2-202ENST00000548877 MYH3P11055 1940 aa17.53■□□□□ 0.4
CDX2-202ENST00000548877 MKI67P46013 3256 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms