RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 LTBP3Q9NS15 1303 aa11□□□□□ -0.65
SP1-203ENST00000548560 H7C1W4 665 aa10.99□□□□□ -0.65
SP1-203ENST00000548560 NFKBIEO00221 500 aa10.99□□□□□ -0.65
SP1-203ENST00000548560 GRM8O00222 908 aa10.99□□□□□ -0.65
SP1-203ENST00000548560 IPO8O15397 1037 aaKnown RBP10.99□□□□□ -0.65
SP1-203ENST00000548560 BBOX1O75936 387 aa10.99□□□□□ -0.65
SP1-203ENST00000548560 BRPF1P55201 1214 aaPredicted RBP10.99□□□□□ -0.65
SP1-203ENST00000548560 NOB1Q9ULX3 412 aaKnown RBP10.99□□□□□ -0.65
SP1-203ENST00000548560 PCDHB8Q9UN66 801 aa10.99□□□□□ -0.65
SP1-203ENST00000548560 PCDHB13Q9Y5F0 798 aa10.99□□□□□ -0.65
SP1-203ENST00000548560 PSEN1P49768 467 aa10.98□□□□□ -0.65
SP1-203ENST00000548560 FKBP4Q02790 459 aaKnown RBP eCLIP10.98□□□□□ -0.65
SP1-203ENST00000548560 C7orf43Q8WVR3 580 aa10.98□□□□□ -0.65
SP1-203ENST00000548560 CCDC85AQ96PX6 553 aaPredicted RBP10.98□□□□□ -0.65
SP1-203ENST00000548560 CDC5LQ99459 802 aaKnown RBP10.98□□□□□ -0.65
SP1-203ENST00000548560 ATP6V0A2Q9Y487 856 aa10.98□□□□□ -0.65
SP1-203ENST00000548560 ZC3H4Q9UPT8 1303 aaKnown RBP10.98□□□□□ -0.65
SP1-203ENST00000548560 CCT4P50991 539 aaKnown RBP10.97□□□□□ -0.65
SP1-203ENST00000548560 OLFM4Q6UX06 510 aa10.97□□□□□ -0.65
SP1-203ENST00000548560 ANKRD18AQ8IVF6 992 aa10.97□□□□□ -0.65
SP1-203ENST00000548560 ZNF579Q8NAF0 562 aaKnown RBP10.97□□□□□ -0.65
SP1-203ENST00000548560 FRAT1Q92837 279 aaPredicted RBP10.97□□□□□ -0.65
SP1-203ENST00000548560 CELF1Q92879 486 aaKnown RBP10.97□□□□□ -0.65
SP1-203ENST00000548560 PLA2G12BQ9BX93 195 aa10.97□□□□□ -0.65
SP1-203ENST00000548560 CHMP3Q9Y3E7 222 aa10.97□□□□□ -0.65
SP1-203ENST00000548560 A0A1B0GUL6 1792 aa10.97□□□□□ -0.65
SP1-203ENST00000548560 LTBP1Q14766 1721 aa10.96□□□□□ -0.65
SP1-203ENST00000548560 COL4A1P02462 1669 aa10.96□□□□□ -0.65
SP1-203ENST00000548560 RTL9Q8NET4 1388 aa10.96□□□□□ -0.65
SP1-203ENST00000548560 CASP7P55210 303 aa10.96□□□□□ -0.65
SP1-203ENST00000548560 RPS8P62241 208 aaKnown RBP10.96□□□□□ -0.65
SP1-203ENST00000548560 DPP8Q6V1X1 898 aaPredicted RBP10.96□□□□□ -0.65
SP1-203ENST00000548560 SP8Q8IXZ3 490 aa10.96□□□□□ -0.65
SP1-203ENST00000548560 SUPT20HQ8NEM7 779 aa10.96□□□□□ -0.65
SP1-203ENST00000548560 TTLL11Q8NHH1 800 aa10.96□□□□□ -0.65
SP1-203ENST00000548560 ARHGAP45Q92619 1136 aa10.96□□□□□ -0.65
SP1-203ENST00000548560 YTHDC1Q96MU7 727 aaKnown RBP10.96□□□□□ -0.65
SP1-203ENST00000548560 PSMD1Q99460 953 aa10.96□□□□□ -0.65
SP1-203ENST00000548560 SNED1Q8TER0 1413 aa10.95□□□□□ -0.66
SP1-203ENST00000548560 BCAR3O75815 825 aa10.95□□□□□ -0.66
SP1-203ENST00000548560 IGHMBP2P38935 993 aaKnown RBP10.95□□□□□ -0.66
SP1-203ENST00000548560 IARSP41252 1262 aaKnown RBP10.95□□□□□ -0.66
SP1-203ENST00000548560 FAM161AQ3B820 660 aa10.95□□□□□ -0.66
SP1-203ENST00000548560 ZKSCAN2Q63HK3 967 aa10.95□□□□□ -0.66
SP1-203ENST00000548560 MPNDQ8N594 471 aa10.95□□□□□ -0.66
SP1-203ENST00000548560 ZNF526Q8TF50 670 aaPredicted RBP10.95□□□□□ -0.66
SP1-203ENST00000548560 GREM2Q9H772 168 aa10.95□□□□□ -0.66
SP1-203ENST00000548560 GPBP1L1Q9HC44 474 aaPredicted RBP10.95□□□□□ -0.66
SP1-203ENST00000548560 SEC31BQ9NQW1 1179 aa10.95□□□□□ -0.66
SP1-203ENST00000548560 ZNF277Q9NRM2 450 aaPredicted RBP10.95□□□□□ -0.66
SP1-203ENST00000548560 KDM2BQ8NHM5 1336 aa10.94□□□□□ -0.66
SP1-203ENST00000548560 ANKRD18BA2A2Z9 1011 aa10.94□□□□□ -0.66
SP1-203ENST00000548560 TULP1O00294 542 aaPredicted RBP10.94□□□□□ -0.66
SP1-203ENST00000548560 TRIM27P14373 513 aa10.94□□□□□ -0.66
SP1-203ENST00000548560 ITGA6P23229 1130 aa10.94□□□□□ -0.66
SP1-203ENST00000548560 IFIT5Q13325 482 aaKnown RBP10.94□□□□□ -0.66
SP1-203ENST00000548560 CCDC57Q2TAC2 916 aa10.94□□□□□ -0.66
SP1-203ENST00000548560 TAF7LQ5H9L4 462 aa10.94□□□□□ -0.66
SP1-203ENST00000548560 ATF7IPQ6VMQ6 1270 aa10.94□□□□□ -0.66
SP1-203ENST00000548560 FTSJ3Q8IY81 847 aaKnown RBP10.94□□□□□ -0.66
SP1-203ENST00000548560 JDP2Q8WYK2 163 aa10.94□□□□□ -0.66
SP1-203ENST00000548560 MPHOSPH8Q99549 860 aa10.94□□□□□ -0.66
SP1-203ENST00000548560 HDAC5Q9UQL6 1122 aa10.94□□□□□ -0.66
SP1-203ENST00000548560 DUOX1Q9NRD9 1551 aa10.94□□□□□ -0.66
SP1-203ENST00000548560 WDR90Q96KV7 1748 aa10.93□□□□□ -0.66
SP1-203ENST00000548560 UTYO14607 1347 aa10.93□□□□□ -0.66
SP1-203ENST00000548560 KIF3CO14782 793 aa10.93□□□□□ -0.66
SP1-203ENST00000548560 PPIP5K2O43314 1243 aa10.93□□□□□ -0.66
SP1-203ENST00000548560 NBPF7P0C2Y1 421 aaPredicted RBP10.93□□□□□ -0.66
SP1-203ENST00000548560 UBTFL1P0CB47 393 aaPredicted RBP10.93□□□□□ -0.66
SP1-203ENST00000548560 DPY19L2Q6NUT2 758 aa10.93□□□□□ -0.66
SP1-203ENST00000548560 LMBR1LQ6UX01 489 aa10.93□□□□□ -0.66
SP1-203ENST00000548560 LARGE2Q8N3Y3 721 aa10.93□□□□□ -0.66
SP1-203ENST00000548560 ANKIB1Q9P2G1 1089 aa10.93□□□□□ -0.66
SP1-203ENST00000548560 NSFL1CQ9UNZ2 370 aaKnown RBP10.93□□□□□ -0.66
SP1-203ENST00000548560 CSF1RP07333 972 aa10.92□□□□□ -0.66
SP1-203ENST00000548560 PRELPP51888 382 aa10.92□□□□□ -0.66
SP1-203ENST00000548560 FOXO4P98177 505 aa10.92□□□□□ -0.66
SP1-203ENST00000548560 NIM1KQ8IY84 436 aa10.92□□□□□ -0.66
SP1-203ENST00000548560 CLUAP1Q96AJ1 413 aa10.92□□□□□ -0.66
SP1-203ENST00000548560 SUCLG2Q96I99 432 aa10.92□□□□□ -0.66
SP1-203ENST00000548560 EYA3Q99504 573 aa10.92□□□□□ -0.66
SP1-203ENST00000548560 VPS33BQ9H267 617 aa10.92□□□□□ -0.66
SP1-203ENST00000548560 BICC1Q9H694 974 aaKnown RBP10.92□□□□□ -0.66
SP1-203ENST00000548560 SCN4AP35499 1836 aa10.92□□□□□ -0.66
SP1-203ENST00000548560 PSME4Q14997 1843 aa10.91□□□□□ -0.66
SP1-203ENST00000548560 XDHP47989 1333 aa10.91□□□□□ -0.66
SP1-203ENST00000548560 C6orf229H3BNL8 230 aa10.91□□□□□ -0.66
SP1-203ENST00000548560 UFL1O94874 794 aa10.91□□□□□ -0.66
SP1-203ENST00000548560 GPSM2P81274 684 aa10.91□□□□□ -0.66
SP1-203ENST00000548560 AOC3Q16853 763 aa10.91□□□□□ -0.66
SP1-203ENST00000548560 INTS3Q68E01 1043 aaKnown RBP10.91□□□□□ -0.66
SP1-203ENST00000548560 SLC51AQ86UW1 340 aa10.91□□□□□ -0.66
SP1-203ENST00000548560 KCNV2Q8TDN2 545 aa10.91□□□□□ -0.66
SP1-203ENST00000548560 RTFDC1Q9BY42 306 aaPredicted RBP10.91□□□□□ -0.66
SP1-203ENST00000548560 USP44Q9H0E7 712 aa10.91□□□□□ -0.66
SP1-203ENST00000548560 BSDC1Q9NW68 430 aaPredicted RBP10.91□□□□□ -0.66
SP1-203ENST00000548560 GGA1Q9UJY5 639 aa10.91□□□□□ -0.66
SP1-203ENST00000548560 RCAN3Q9UKA8 241 aa10.91□□□□□ -0.66
SP1-203ENST00000548560 GLTPD2A6NH11 291 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms