RNA–Protein interactions for RNA: ENST00000548516.5

LETMD1-217, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-217ENST00000548516 ISCA1Q9BUE6 129 aa12.17□□□□□ -0.46
LETMD1-217ENST00000548516 RNF186Q9NXI6 227 aa12.17□□□□□ -0.46
LETMD1-217ENST00000548516 ASTN2O75129 1339 aaPredicted RBP12.16□□□□□ -0.46
LETMD1-217ENST00000548516 THSD7BQ9C0I4 1608 aa12.16□□□□□ -0.46
LETMD1-217ENST00000548516 CHL1O00533 1208 aa12.16□□□□□ -0.46
LETMD1-217ENST00000548516 RPS12P25398 132 aaKnown RBP12.16□□□□□ -0.46
LETMD1-217ENST00000548516 JARID2Q92833 1246 aaPredicted RBP12.16□□□□□ -0.46
LETMD1-217ENST00000548516 CCDC85AQ96PX6 553 aaPredicted RBP12.16□□□□□ -0.46
LETMD1-217ENST00000548516 SEC31BQ9NQW1 1179 aa12.16□□□□□ -0.46
LETMD1-217ENST00000548516 GGA3Q9NZ52 723 aa12.16□□□□□ -0.46
LETMD1-217ENST00000548516 ANKIB1Q9P2G1 1089 aa12.16□□□□□ -0.46
LETMD1-217ENST00000548516 UFL1O94874 794 aa12.15□□□□□ -0.46
LETMD1-217ENST00000548516 WDR43Q15061 677 aaKnown RBP eCLIP12.15□□□□□ -0.46
LETMD1-217ENST00000548516 RIC3Q7Z5B4 369 aa12.15□□□□□ -0.46
LETMD1-217ENST00000548516 CDCA5Q96FF9 252 aa12.15□□□□□ -0.46
LETMD1-217ENST00000548516 DBF4Q9UBU7 674 aaPredicted RBP12.15□□□□□ -0.46
LETMD1-217ENST00000548516 RTL9Q8NET4 1388 aa12.15□□□□□ -0.46
LETMD1-217ENST00000548516 VIL1P09327 827 aaKnown RBP12.14□□□□□ -0.47
LETMD1-217ENST00000548516 SCARF1Q14162 830 aa12.14□□□□□ -0.47
LETMD1-217ENST00000548516 ANGEL2Q5VTE6 544 aaKnown RBP12.14□□□□□ -0.47
LETMD1-217ENST00000548516 CSRNP1Q96S65 589 aa12.14□□□□□ -0.47
LETMD1-217ENST00000548516 HYPKQ9NX55 129 aa12.14□□□□□ -0.47
LETMD1-217ENST00000548516 GGA1Q9UJY5 639 aa12.14□□□□□ -0.47
LETMD1-217ENST00000548516 SCAF8Q9UPN6 1271 aaKnown RBP12.14□□□□□ -0.47
LETMD1-217ENST00000548516 ELL2O00472 640 aaPredicted RBP12.13□□□□□ -0.47
LETMD1-217ENST00000548516 GOLGA2Q08379 1002 aa12.13□□□□□ -0.47
LETMD1-217ENST00000548516 DUSP27Q5VZP5 1158 aa12.13□□□□□ -0.47
LETMD1-217ENST00000548516 MYD88Q99836 296 aa12.13□□□□□ -0.47
LETMD1-217ENST00000548516 SAGE1Q9NXZ1 904 aa12.13□□□□□ -0.47
LETMD1-217ENST00000548516 TRIM35Q9UPQ4 493 aa12.13□□□□□ -0.47
LETMD1-217ENST00000548516 MYBBP1AQ9BQG0 1328 aaKnown RBP12.12□□□□□ -0.47
LETMD1-217ENST00000548516 TAF1P21675 1872 aa12.12□□□□□ -0.47
LETMD1-217ENST00000548516 SLC10A3P09131 477 aa12.12□□□□□ -0.47
LETMD1-217ENST00000548516 TTLL12Q14166 644 aaPredicted RBP12.12□□□□□ -0.47
LETMD1-217ENST00000548516 PRAMEF18Q5VWM3 479 aa12.12□□□□□ -0.47
LETMD1-217ENST00000548516 RSBN1LQ6PCB5 846 aaPredicted RBP12.12□□□□□ -0.47
LETMD1-217ENST00000548516 MOB2Q70IA6 237 aa12.12□□□□□ -0.47
LETMD1-217ENST00000548516 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
LETMD1-217ENST00000548516 DUOX1Q9NRD9 1551 aa12.12□□□□□ -0.47
LETMD1-217ENST00000548516 ANKRD36CQ5JPF3 1778 aa12.11□□□□□ -0.47
LETMD1-217ENST00000548516 UBE2Q2LH0YL09 131 aa12.11□□□□□ -0.47
LETMD1-217ENST00000548516 TRIM28Q13263 835 aaKnown RBP12.11□□□□□ -0.47
LETMD1-217ENST00000548516 CCDC152Q4G0S7 254 aa12.11□□□□□ -0.47
LETMD1-217ENST00000548516 CTU1Q7Z7A3 348 aaKnown RBP12.11□□□□□ -0.47
LETMD1-217ENST00000548516 RASAL3Q86YV0 1011 aa12.11□□□□□ -0.47
LETMD1-217ENST00000548516 ZBTB38Q8NAP3 1195 aaPredicted RBP12.11□□□□□ -0.47
LETMD1-217ENST00000548516 FBXW7Q969H0 707 aa12.11□□□□□ -0.47
LETMD1-217ENST00000548516 PHAXQ9H814 394 aaKnown RBP12.11□□□□□ -0.47
LETMD1-217ENST00000548516 HDAC9Q9UKV0 1011 aa12.11□□□□□ -0.47
LETMD1-217ENST00000548516 TBC1D8O95759 1140 aa12.1□□□□□ -0.47
LETMD1-217ENST00000548516 HOXB7P09629 217 aa12.1□□□□□ -0.47
LETMD1-217ENST00000548516 USP17L8P0C7I0 530 aa12.1□□□□□ -0.47
LETMD1-217ENST00000548516 HSP90B1P14625 803 aaKnown RBP12.1□□□□□ -0.47
LETMD1-217ENST00000548516 MKRN3Q13064 507 aaKnown RBP12.1□□□□□ -0.47
LETMD1-217ENST00000548516 ANKRD18AQ8IVF6 992 aa12.1□□□□□ -0.47
LETMD1-217ENST00000548516 AGBL3Q8NEM8 1001 aa12.1□□□□□ -0.47
LETMD1-217ENST00000548516 MYOZ2Q9NPC6 264 aa12.1□□□□□ -0.47
LETMD1-217ENST00000548516 PODXL2Q9NZ53 605 aa12.1□□□□□ -0.47
LETMD1-217ENST00000548516 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.1□□□□□ -0.47
LETMD1-217ENST00000548516 LAMB2P55268 1798 aa12.1□□□□□ -0.47
LETMD1-217ENST00000548516 PDE8AO60658 829 aa12.09□□□□□ -0.47
LETMD1-217ENST00000548516 ZNF280AP59817 542 aaPredicted RBP12.09□□□□□ -0.47
LETMD1-217ENST00000548516 DDX10Q13206 875 aaKnown RBP12.09□□□□□ -0.47
LETMD1-217ENST00000548516 MBIPQ9NS73 344 aa12.09□□□□□ -0.47
LETMD1-217ENST00000548516 CWC25Q9NXE8 425 aaPredicted RBP12.09□□□□□ -0.47
LETMD1-217ENST00000548516 ADAMTS8Q9UP79 889 aa12.09□□□□□ -0.47
LETMD1-217ENST00000548516 PDE4DIPQ5VU43 2346 aa12.09□□□□□ -0.47
LETMD1-217ENST00000548516 POLR2AP24928 1970 aaKnown RBP12.09□□□□□ -0.47
LETMD1-217ENST00000548516 COL4A1P02462 1669 aa12.08□□□□□ -0.48
LETMD1-217ENST00000548516 USP17L3A6NCW0 530 aa12.08□□□□□ -0.48
LETMD1-217ENST00000548516 USP17L4A6NCW7 530 aa12.08□□□□□ -0.48
LETMD1-217ENST00000548516 ATP2B4P23634 1241 aa12.08□□□□□ -0.48
LETMD1-217ENST00000548516 PRKG1Q13976 671 aa12.08□□□□□ -0.48
LETMD1-217ENST00000548516 USP17L1Q7RTZ2 530 aa12.08□□□□□ -0.48
LETMD1-217ENST00000548516 REM2Q8IYK8 340 aaPredicted RBP12.08□□□□□ -0.48
LETMD1-217ENST00000548516 MXD3Q9BW11 206 aa12.08□□□□□ -0.48
LETMD1-217ENST00000548516 HPS5Q9UPZ3 1129 aa12.08□□□□□ -0.48
LETMD1-217ENST00000548516 XDHP47989 1333 aa12.08□□□□□ -0.48
LETMD1-217ENST00000548516 WTIPA6NIX2 430 aaPredicted RBP12.07□□□□□ -0.48
LETMD1-217ENST00000548516 PCCAP05165 728 aaPredicted RBP12.07□□□□□ -0.48
LETMD1-217ENST00000548516 FKBP1BP68106 108 aa12.07□□□□□ -0.48
LETMD1-217ENST00000548516 NBPF9Q3BBW0 867 aa12.07□□□□□ -0.48
LETMD1-217ENST00000548516 CCDC191Q8NCU4 936 aa12.07□□□□□ -0.48
LETMD1-217ENST00000548516 ZNF296Q8WUU4 475 aaPredicted RBP12.07□□□□□ -0.48
LETMD1-217ENST00000548516 PODNQ7Z5L7 613 aa12.06□□□□□ -0.48
LETMD1-217ENST00000548516 OGFOD1Q8N543 542 aa12.06□□□□□ -0.48
LETMD1-217ENST00000548516 GMLQ99445 158 aa12.06□□□□□ -0.48
LETMD1-217ENST00000548516 PCDH10Q9P2E7 1040 aa12.06□□□□□ -0.48
LETMD1-217ENST00000548516 DDX58O95786 925 aaKnown RBP12.05□□□□□ -0.48
LETMD1-217ENST00000548516 NF2P35240 595 aa12.05□□□□□ -0.48
LETMD1-217ENST00000548516 CALD1Q05682 793 aaKnown RBP12.05□□□□□ -0.48
LETMD1-217ENST00000548516 CDC5LQ99459 802 aaKnown RBP12.05□□□□□ -0.48
LETMD1-217ENST00000548516 METTL22Q9BUU2 404 aaPredicted RBP12.05□□□□□ -0.48
LETMD1-217ENST00000548516 MAP3K2Q9Y2U5 619 aa12.05□□□□□ -0.48
LETMD1-217ENST00000548516 DDX60Q8IY21 1712 aaKnown RBP12.05□□□□□ -0.48
LETMD1-217ENST00000548516 LRRC37AA6NMS7 1700 aa12.04□□□□□ -0.48
LETMD1-217ENST00000548516 APAF1O14727 1248 aa12.04□□□□□ -0.48
LETMD1-217ENST00000548516 SASH1O94885 1247 aa12.04□□□□□ -0.48
LETMD1-217ENST00000548516 GNAI1P63096 354 aa12.04□□□□□ -0.48
LETMD1-217ENST00000548516 C8orf58Q8NAV2 365 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms