RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 RBM26Q5T8P6 1007 aaKnown RBP12.73□□□□□ -0.37
SLC48A1-206ENST00000548498 CTU1Q7Z7A3 348 aaKnown RBP12.73□□□□□ -0.37
SLC48A1-206ENST00000548498 C2orf69Q8N8R5 385 aa12.73□□□□□ -0.37
SLC48A1-206ENST00000548498 DPF2Q92785 391 aa12.73□□□□□ -0.37
SLC48A1-206ENST00000548498 CCDC102AQ96A19 550 aa12.73□□□□□ -0.37
SLC48A1-206ENST00000548498 CSRNP1Q96S65 589 aa12.73□□□□□ -0.37
SLC48A1-206ENST00000548498 ECM29Q5VYK3 1845 aa12.72□□□□□ -0.37
SLC48A1-206ENST00000548498 SH3TC1Q8TE82 1336 aa12.72□□□□□ -0.37
SLC48A1-206ENST00000548498 RIMBP2O15034 1052 aa12.72□□□□□ -0.37
SLC48A1-206ENST00000548498 EIF2S2P20042 333 aaKnown RBP12.72□□□□□ -0.37
SLC48A1-206ENST00000548498 RASAL3Q86YV0 1011 aa12.72□□□□□ -0.37
SLC48A1-206ENST00000548498 GGA3Q9NZ52 723 aa12.72□□□□□ -0.37
SLC48A1-206ENST00000548498 HPS5Q9UPZ3 1129 aa12.72□□□□□ -0.37
SLC48A1-206ENST00000548498 ECE2O60344 883 aa12.71□□□□□ -0.37
SLC48A1-206ENST00000548498 WASHC4Q2M389 1173 aa12.71□□□□□ -0.37
SLC48A1-206ENST00000548498 KIF4BQ2VIQ3 1234 aa12.71□□□□□ -0.37
SLC48A1-206ENST00000548498 CELF1Q92879 486 aaKnown RBP12.71□□□□□ -0.37
SLC48A1-206ENST00000548498 DCPSQ96C86 337 aaKnown RBP12.71□□□□□ -0.37
SLC48A1-206ENST00000548498 CDCA5Q96FF9 252 aa12.71□□□□□ -0.37
SLC48A1-206ENST00000548498 TRMT112Q9UI30 125 aaKnown RBP12.71□□□□□ -0.37
SLC48A1-206ENST00000548498 HOXB7P09629 217 aa12.7□□□□□ -0.38
SLC48A1-206ENST00000548498 ZNF853P0CG23 659 aa12.7□□□□□ -0.38
SLC48A1-206ENST00000548498 GPSM2P81274 684 aa12.7□□□□□ -0.38
SLC48A1-206ENST00000548498 AIMP1Q12904 312 aaKnown RBP12.7□□□□□ -0.38
SLC48A1-206ENST00000548498 DOK7Q18PE1 504 aa12.7□□□□□ -0.38
SLC48A1-206ENST00000548498 COPS6Q7L5N1 327 aa12.7□□□□□ -0.38
SLC48A1-206ENST00000548498 XAGE3Q8WTP9 111 aa12.7□□□□□ -0.38
SLC48A1-206ENST00000548498 NECTIN2Q92692 538 aa12.7□□□□□ -0.38
SLC48A1-206ENST00000548498 POLLQ9UGP5 575 aa12.7□□□□□ -0.38
SLC48A1-206ENST00000548498 TSPYL4Q9UJ04 414 aa12.7□□□□□ -0.38
SLC48A1-206ENST00000548498 NSFL1CQ9UNZ2 370 aaKnown RBP12.7□□□□□ -0.38
SLC48A1-206ENST00000548498 ZNF609O15014 1411 aa12.7□□□□□ -0.38
SLC48A1-206ENST00000548498 HTTP42858 3142 aa12.69□□□□□ -0.38
SLC48A1-206ENST00000548498 RPS12P25398 132 aaKnown RBP12.69□□□□□ -0.38
SLC48A1-206ENST00000548498 TCIRG1Q13488 830 aa12.69□□□□□ -0.38
SLC48A1-206ENST00000548498 HSP90AB3PQ58FF7 597 aa12.69□□□□□ -0.38
SLC48A1-206ENST00000548498 TMC4Q7Z404 712 aa12.69□□□□□ -0.38
SLC48A1-206ENST00000548498 SULF1Q8IWU6 871 aa12.69□□□□□ -0.38
SLC48A1-206ENST00000548498 C6orf229H3BNL8 230 aa12.68□□□□□ -0.38
SLC48A1-206ENST00000548498 CCDC146Q8IYE0 955 aa12.68□□□□□ -0.38
SLC48A1-206ENST00000548498 A0A1B0GUL6 1792 aa12.68□□□□□ -0.38
SLC48A1-206ENST00000548498 MKI67P46013 3256 aaKnown RBP12.68□□□□□ -0.38
SLC48A1-206ENST00000548498 CCDC27Q2M243 656 aa12.67□□□□□ -0.38
SLC48A1-206ENST00000548498 KRT24Q2M2I5 525 aa12.67□□□□□ -0.38
SLC48A1-206ENST00000548498 ANGEL2Q5VTE6 544 aaKnown RBP12.67□□□□□ -0.38
SLC48A1-206ENST00000548498 MOB2Q70IA6 237 aa12.67□□□□□ -0.38
SLC48A1-206ENST00000548498 TBC1D16Q8TBP0 767 aa12.67□□□□□ -0.38
SLC48A1-206ENST00000548498 ZNF296Q8WUU4 475 aaPredicted RBP12.67□□□□□ -0.38
SLC48A1-206ENST00000548498 SCAF8Q9UPN6 1271 aaKnown RBP12.67□□□□□ -0.38
SLC48A1-206ENST00000548498 OTOFQ9HC10 1997 aa12.67□□□□□ -0.38
SLC48A1-206ENST00000548498 CENPFP49454 3210 aa12.66□□□□□ -0.38
SLC48A1-206ENST00000548498 TBC1D8O95759 1140 aa12.66□□□□□ -0.38
SLC48A1-206ENST00000548498 FAM89AQ96GI7 184 aa12.66□□□□□ -0.38
SLC48A1-206ENST00000548498 IFT57Q9NWB7 429 aa12.66□□□□□ -0.38
SLC48A1-206ENST00000548498 APAF1O14727 1248 aa12.65□□□□□ -0.38
SLC48A1-206ENST00000548498 VIL1P09327 827 aaKnown RBP12.65□□□□□ -0.38
SLC48A1-206ENST00000548498 CALD1Q05682 793 aaKnown RBP12.65□□□□□ -0.38
SLC48A1-206ENST00000548498 SF3B3Q15393 1217 aaKnown RBP12.65□□□□□ -0.38
SLC48A1-206ENST00000548498 CCDC184Q52MB2 194 aa12.65□□□□□ -0.38
SLC48A1-206ENST00000548498 RTL5Q5HYW3 569 aaPredicted RBP12.65□□□□□ -0.38
SLC48A1-206ENST00000548498 EYA3Q99504 573 aa12.65□□□□□ -0.38
SLC48A1-206ENST00000548498 KIAA0100Q14667 2235 aaKnown RBP12.65□□□□□ -0.38
SLC48A1-206ENST00000548498 ATP5J2-PTCD1G3V325 749 aa12.64□□□□□ -0.39
SLC48A1-206ENST00000548498 ZNF280AP59817 542 aaPredicted RBP12.64□□□□□ -0.39
SLC48A1-206ENST00000548498 SCARF1Q14162 830 aa12.64□□□□□ -0.39
SLC48A1-206ENST00000548498 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
SLC48A1-206ENST00000548498 ISCA1Q9BUE6 129 aa12.64□□□□□ -0.39
SLC48A1-206ENST00000548498 CHPF2Q9P2E5 772 aa12.64□□□□□ -0.39
SLC48A1-206ENST00000548498 HDAC9Q9UKV0 1011 aa12.64□□□□□ -0.39
SLC48A1-206ENST00000548498 BRCA2P51587 3418 aa12.63□□□□□ -0.39
SLC48A1-206ENST00000548498 UFL1O94874 794 aa12.63□□□□□ -0.39
SLC48A1-206ENST00000548498 FKBP1BP68106 108 aa12.63□□□□□ -0.39
SLC48A1-206ENST00000548498 PKN2Q16513 984 aaKnown RBP12.63□□□□□ -0.39
SLC48A1-206ENST00000548498 PRAMEF18Q5VWM3 479 aa12.63□□□□□ -0.39
SLC48A1-206ENST00000548498 UBE2Q2LH0YL09 131 aa12.62□□□□□ -0.39
SLC48A1-206ENST00000548498 ANP32CO43423 234 aa12.62□□□□□ -0.39
SLC48A1-206ENST00000548498 NEUROD2Q15784 382 aa12.62□□□□□ -0.39
SLC48A1-206ENST00000548498 RSBN1LQ6PCB5 846 aaPredicted RBP12.62□□□□□ -0.39
SLC48A1-206ENST00000548498 PLBD2Q8NHP8 589 aa12.62□□□□□ -0.39
SLC48A1-206ENST00000548498 GMLQ99445 158 aa12.62□□□□□ -0.39
SLC48A1-206ENST00000548498 ZC3H12CQ9C0D7 883 aaKnown RBP12.62□□□□□ -0.39
SLC48A1-206ENST00000548498 SEC31BQ9NQW1 1179 aa12.62□□□□□ -0.39
SLC48A1-206ENST00000548498 MBIPQ9NS73 344 aa12.62□□□□□ -0.39
SLC48A1-206ENST00000548498 IL16Q14005 1332 aa12.62□□□□□ -0.39
SLC48A1-206ENST00000548498 PITPNM2Q9BZ72 1349 aa12.62□□□□□ -0.39
SLC48A1-206ENST00000548498 ZSWIM8A7E2V4 1837 aa12.61□□□□□ -0.39
SLC48A1-206ENST00000548498 GPR25O00155 361 aa12.61□□□□□ -0.39
SLC48A1-206ENST00000548498 RPS8P62241 208 aaKnown RBP12.61□□□□□ -0.39
SLC48A1-206ENST00000548498 GNAI1P63096 354 aa12.61□□□□□ -0.39
SLC48A1-206ENST00000548498 MKRN3Q13064 507 aaKnown RBP12.61□□□□□ -0.39
SLC48A1-206ENST00000548498 FBXO46Q6PJ61 603 aaPredicted RBP12.61□□□□□ -0.39
SLC48A1-206ENST00000548498 AGBL3Q8NEM8 1001 aa12.61□□□□□ -0.39
SLC48A1-206ENST00000548498 R3HDMLQ9H3Y0 253 aa12.61□□□□□ -0.39
SLC48A1-206ENST00000548498 MYOZ2Q9NPC6 264 aa12.61□□□□□ -0.39
SLC48A1-206ENST00000548498 PODXL2Q9NZ53 605 aa12.61□□□□□ -0.39
SLC48A1-206ENST00000548498 IRS4O14654 1257 aaPredicted RBP12.6□□□□□ -0.39
SLC48A1-206ENST00000548498 G3V3G9 751 aa12.59□□□□□ -0.39
SLC48A1-206ENST00000548498 USP17L8P0C7I0 530 aa12.59□□□□□ -0.39
SLC48A1-206ENST00000548498 TM4SF4P48230 202 aa12.59□□□□□ -0.39
SLC48A1-206ENST00000548498 NBPF9Q3BBW0 867 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms