RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 DPF2Q92785 391 aa20.64■□□□□ 0.89
RAPGEF3-217ENST00000548434 CNOT7Q9UIV1 285 aaKnown RBP20.64■□□□□ 0.89
RAPGEF3-217ENST00000548434 THSD7BQ9C0I4 1608 aa20.64■□□□□ 0.89
RAPGEF3-217ENST00000548434 WTIPA6NIX2 430 aaPredicted RBP20.63■□□□□ 0.89
RAPGEF3-217ENST00000548434 CCDC152Q4G0S7 254 aa20.63■□□□□ 0.89
RAPGEF3-217ENST00000548434 ZC3H15Q8WU90 426 aaKnown RBP20.63■□□□□ 0.89
RAPGEF3-217ENST00000548434 DBNDD1Q9H9R9 158 aa20.63■□□□□ 0.89
RAPGEF3-217ENST00000548434 ZBTB12Q9Y330 459 aaPredicted RBP20.63■□□□□ 0.89
RAPGEF3-217ENST00000548434 ANP32CO43423 234 aa20.62■□□□□ 0.89
RAPGEF3-217ENST00000548434 EGFRP00533 1210 aa20.62■□□□□ 0.89
RAPGEF3-217ENST00000548434 HSP90B1P14625 803 aaKnown RBP20.62■□□□□ 0.89
RAPGEF3-217ENST00000548434 CTSWP56202 376 aa20.62■□□□□ 0.89
RAPGEF3-217ENST00000548434 DEFB115Q30KQ5 88 aa20.62■□□□□ 0.89
RAPGEF3-217ENST00000548434 WBP1LQ9NX94 342 aa20.62■□□□□ 0.89
RAPGEF3-217ENST00000548434 ZNF609O15014 1411 aa20.61■□□□□ 0.89
RAPGEF3-217ENST00000548434 C6orf229H3BNL8 230 aa20.61■□□□□ 0.89
RAPGEF3-217ENST00000548434 RIMBP2O15034 1052 aa20.61■□□□□ 0.89
RAPGEF3-217ENST00000548434 ECE2O60344 883 aa20.61■□□□□ 0.89
RAPGEF3-217ENST00000548434 VIL1P09327 827 aaKnown RBP20.61■□□□□ 0.89
RAPGEF3-217ENST00000548434 FLIIQ13045 1269 aa20.61■□□□□ 0.89
RAPGEF3-217ENST00000548434 PLA2G12BQ9BX93 195 aa20.61■□□□□ 0.89
RAPGEF3-217ENST00000548434 SPEF2Q9C093 1822 aa20.61■□□□□ 0.89
RAPGEF3-217ENST00000548434 FOXN1O15353 648 aa20.6■□□□□ 0.89
RAPGEF3-217ENST00000548434 DOK7Q18PE1 504 aa20.6■□□□□ 0.89
RAPGEF3-217ENST00000548434 CCDC85AQ96PX6 553 aaPredicted RBP20.6■□□□□ 0.89
RAPGEF3-217ENST00000548434 STK31Q9BXU1 1019 aa20.6■□□□□ 0.89
RAPGEF3-217ENST00000548434 ZNF521Q96K83 1311 aa20.59■□□□□ 0.89
RAPGEF3-217ENST00000548434 CSF1RP07333 972 aa20.59■□□□□ 0.89
RAPGEF3-217ENST00000548434 EXOSC9Q06265 439 aaKnown RBP20.59■□□□□ 0.89
RAPGEF3-217ENST00000548434 GCKRQ14397 625 aa20.59■□□□□ 0.89
RAPGEF3-217ENST00000548434 MICALL2Q8IY33 904 aa20.59■□□□□ 0.89
RAPGEF3-217ENST00000548434 GMLQ99445 158 aa20.59■□□□□ 0.89
RAPGEF3-217ENST00000548434 GLIS2Q9BZE0 524 aaPredicted RBP20.59■□□□□ 0.89
RAPGEF3-217ENST00000548434 GREM2Q9H772 168 aa20.59■□□□□ 0.89
RAPGEF3-217ENST00000548434 TLL2Q9Y6L7 1015 aa20.59■□□□□ 0.89
RAPGEF3-217ENST00000548434 EYA3Q99504 573 aa20.58■□□□□ 0.89
RAPGEF3-217ENST00000548434 BSDC1Q9NW68 430 aaPredicted RBP20.58■□□□□ 0.89
RAPGEF3-217ENST00000548434 MINPP1Q9UNW1 487 aa20.58■□□□□ 0.89
RAPGEF3-217ENST00000548434 WDR33Q9C0J8 1336 aaKnown RBP20.57■□□□□ 0.88
RAPGEF3-217ENST00000548434 UFL1O94874 794 aa20.57■□□□□ 0.88
RAPGEF3-217ENST00000548434 RPS12P25398 132 aaKnown RBP20.57■□□□□ 0.88
RAPGEF3-217ENST00000548434 SAMD7Q7Z3H4 446 aa20.57■□□□□ 0.88
RAPGEF3-217ENST00000548434 ANKRD18AQ8IVF6 992 aa20.57■□□□□ 0.88
RAPGEF3-217ENST00000548434 BCL2L13Q9BXK5 485 aa20.57■□□□□ 0.88
RAPGEF3-217ENST00000548434 ZC3H12CQ9C0D7 883 aaKnown RBP20.57■□□□□ 0.88
RAPGEF3-217ENST00000548434 GGA1Q9UJY5 639 aa20.57■□□□□ 0.88
RAPGEF3-217ENST00000548434 DLK2Q6UY11 383 aa20.56■□□□□ 0.88
RAPGEF3-217ENST00000548434 UBE3BQ7Z3V4 1068 aa20.56■□□□□ 0.88
RAPGEF3-217ENST00000548434 SALL2Q9Y467 1007 aaPredicted RBP20.56■□□□□ 0.88
RAPGEF3-217ENST00000548434 XDHP47989 1333 aa20.55■□□□□ 0.88
RAPGEF3-217ENST00000548434 NEXNQ0ZGT2 675 aa20.55■□□□□ 0.88
RAPGEF3-217ENST00000548434 SAPCD2Q86UD0 394 aa20.55■□□□□ 0.88
RAPGEF3-217ENST00000548434 LINS1Q8NG48 757 aa20.55■□□□□ 0.88
RAPGEF3-217ENST00000548434 DNAAF4Q8WXU2 420 aa20.55■□□□□ 0.88
RAPGEF3-217ENST00000548434 H7C1D1 291 aa20.54■□□□□ 0.88
RAPGEF3-217ENST00000548434 ZNF280AP59817 542 aaPredicted RBP20.54■□□□□ 0.88
RAPGEF3-217ENST00000548434 ANKIB1Q9P2G1 1089 aa20.54■□□□□ 0.88
RAPGEF3-217ENST00000548434 ATP2B4P23634 1241 aa20.53■□□□□ 0.88
RAPGEF3-217ENST00000548434 BEND3Q5T5X7 828 aa20.53■□□□□ 0.88
RAPGEF3-217ENST00000548434 CDC37L1Q7L3B6 337 aa20.53■□□□□ 0.88
RAPGEF3-217ENST00000548434 HHIPL1Q96JK4 782 aa20.53■□□□□ 0.88
RAPGEF3-217ENST00000548434 CDC5LQ99459 802 aaKnown RBP20.53■□□□□ 0.88
RAPGEF3-217ENST00000548434 PRDM10Q9NQV6 1147 aa20.53■□□□□ 0.88
RAPGEF3-217ENST00000548434 ABT1Q9ULW3 272 aaKnown RBP20.53■□□□□ 0.88
RAPGEF3-217ENST00000548434 A0A1B0GUL6 1792 aa20.53■□□□□ 0.88
RAPGEF3-217ENST00000548434 IRS2Q9Y4H2 1338 aa20.53■□□□□ 0.88
RAPGEF3-217ENST00000548434 CELF2O95319 508 aaKnown RBP20.52■□□□□ 0.88
RAPGEF3-217ENST00000548434 FOXO4P98177 505 aa20.52■□□□□ 0.88
RAPGEF3-217ENST00000548434 TBC1D10BQ4KMP7 808 aaPredicted RBP20.52■□□□□ 0.88
RAPGEF3-217ENST00000548434 CYP4F22Q6NT55 531 aa20.52■□□□□ 0.88
RAPGEF3-217ENST00000548434 TXNRD3Q86VQ6 643 aa20.52■□□□□ 0.88
RAPGEF3-217ENST00000548434 CAPNS2Q96L46 248 aa20.52■□□□□ 0.88
RAPGEF3-217ENST00000548434 MED23Q9ULK4 1368 aa20.51■□□□□ 0.87
RAPGEF3-217ENST00000548434 F6X3S4 739 aa20.51■□□□□ 0.87
RAPGEF3-217ENST00000548434 FKBP5Q13451 457 aaPredicted RBP20.51■□□□□ 0.87
RAPGEF3-217ENST00000548434 RSBN1LQ6PCB5 846 aaPredicted RBP20.51■□□□□ 0.87
RAPGEF3-217ENST00000548434 USP48Q86UV5 1035 aa20.51■□□□□ 0.87
RAPGEF3-217ENST00000548434 ASTN2O75129 1339 aaPredicted RBP20.51■□□□□ 0.87
RAPGEF3-217ENST00000548434 CCT4P50991 539 aaKnown RBP20.5■□□□□ 0.87
RAPGEF3-217ENST00000548434 PODNQ7Z5L7 613 aa20.5■□□□□ 0.87
RAPGEF3-217ENST00000548434 TNS4Q8IZW8 715 aa20.5■□□□□ 0.87
RAPGEF3-217ENST00000548434 AGBL3Q8NEM8 1001 aa20.5■□□□□ 0.87
RAPGEF3-217ENST00000548434 HSPA8P11142 646 aaKnown RBP20.49■□□□□ 0.87
RAPGEF3-217ENST00000548434 ITGA6P23229 1130 aa20.49■□□□□ 0.87
RAPGEF3-217ENST00000548434 FAM161AQ3B820 660 aa20.49■□□□□ 0.87
RAPGEF3-217ENST00000548434 FAM9BQ8IZU0 186 aa20.49■□□□□ 0.87
RAPGEF3-217ENST00000548434 CTCFP49711 727 aaPredicted RBP20.48■□□□□ 0.87
RAPGEF3-217ENST00000548434 EPHA10Q5JZY3 1008 aa20.48■□□□□ 0.87
RAPGEF3-217ENST00000548434 AOC2O75106 756 aa20.47■□□□□ 0.87
RAPGEF3-217ENST00000548434 MAP2K2P36507 400 aa20.47■□□□□ 0.87
RAPGEF3-217ENST00000548434 MAP2K1Q02750 393 aaPredicted RBP20.47■□□□□ 0.87
RAPGEF3-217ENST00000548434 DACT2Q5SW24 774 aa20.47■□□□□ 0.87
RAPGEF3-217ENST00000548434 MYH16Q9H6N6 1097 aa20.47■□□□□ 0.87
RAPGEF3-217ENST00000548434 LEMD3Q9Y2U8 911 aa20.47■□□□□ 0.87
RAPGEF3-217ENST00000548434 USP17L3A6NCW0 530 aa20.46■□□□□ 0.87
RAPGEF3-217ENST00000548434 USP17L4A6NCW7 530 aa20.46■□□□□ 0.87
RAPGEF3-217ENST00000548434 KLRK1P26718 216 aa20.46■□□□□ 0.87
RAPGEF3-217ENST00000548434 ECE1P42892 770 aa20.46■□□□□ 0.87
RAPGEF3-217ENST00000548434 LBX1P52954 281 aa20.46■□□□□ 0.87
RAPGEF3-217ENST00000548434 KIF4BQ2VIQ3 1234 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms