RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 CDC5LQ99459 802 aaKnown RBP29.42■■■□□ 2.3
CACNB3-208ENST00000548279 GPRC5DQ9NZD1 345 aa29.42■■■□□ 2.3
CACNB3-208ENST00000548279 ANKIB1Q9P2G1 1089 aa29.42■■■□□ 2.3
CACNB3-208ENST00000548279 WTIPA6NIX2 430 aaPredicted RBP29.41■■■□□ 2.3
CACNB3-208ENST00000548279 FAM161AQ3B820 660 aa29.41■■■□□ 2.3
CACNB3-208ENST00000548279 MAP1SQ66K74 1059 aaPredicted RBP29.41■■■□□ 2.3
CACNB3-208ENST00000548279 MRPL50Q8N5N7 158 aaKnown RBP29.41■■■□□ 2.3
CACNB3-208ENST00000548279 KLRG1Q96E93 195 aa29.41■■■□□ 2.3
CACNB3-208ENST00000548279 KCNQ5Q9NR82 932 aa29.41■■■□□ 2.3
CACNB3-208ENST00000548279 SCN9AQ15858 1988 aa29.41■■■□□ 2.3
CACNB3-208ENST00000548279 ECE2O60344 883 aa29.4■■■□□ 2.3
CACNB3-208ENST00000548279 CSF1RP07333 972 aa29.4■■■□□ 2.3
CACNB3-208ENST00000548279 EYA3Q99504 573 aa29.4■■■□□ 2.3
CACNB3-208ENST00000548279 GGA1Q9UJY5 639 aa29.4■■■□□ 2.3
CACNB3-208ENST00000548279 BSDC1Q9NW68 430 aaPredicted RBP29.39■■■□□ 2.3
CACNB3-208ENST00000548279 SHTN1A0MZ66 631 aa29.38■■■□□ 2.29
CACNB3-208ENST00000548279 PSMD14O00487 310 aa29.38■■■□□ 2.29
CACNB3-208ENST00000548279 ITGA6P23229 1130 aa29.38■■■□□ 2.29
CACNB3-208ENST00000548279 TNIP1Q15025 636 aa29.38■■■□□ 2.29
CACNB3-208ENST00000548279 TRMT2AQ8IZ69 625 aaKnown RBP29.38■■■□□ 2.29
CACNB3-208ENST00000548279 MINPP1Q9UNW1 487 aa29.38■■■□□ 2.29
CACNB3-208ENST00000548279 XDHP47989 1333 aa29.38■■■□□ 2.29
CACNB3-208ENST00000548279 FOXO4P98177 505 aa29.37■■■□□ 2.29
CACNB3-208ENST00000548279 SLC4A10Q6U841 1118 aa29.37■■■□□ 2.29
CACNB3-208ENST00000548279 SSH1Q8WYL5 1049 aa29.37■■■□□ 2.29
CACNB3-208ENST00000548279 ZC3H12CQ9C0D7 883 aaKnown RBP29.37■■■□□ 2.29
CACNB3-208ENST00000548279 ZBTB12Q9Y330 459 aaPredicted RBP29.37■■■□□ 2.29
CACNB3-208ENST00000548279 EPHA10Q5JZY3 1008 aa29.36■■■□□ 2.29
CACNB3-208ENST00000548279 CNTROBQ8N137 903 aa29.36■■■□□ 2.29
CACNB3-208ENST00000548279 ADARB2Q9NS39 739 aaKnown RBP29.36■■■□□ 2.29
CACNB3-208ENST00000548279 USP50Q70EL3 339 aaPredicted RBP29.35■■■□□ 2.29
CACNB3-208ENST00000548279 BCL2L13Q9BXK5 485 aa29.35■■■□□ 2.29
CACNB3-208ENST00000548279 GRM8O00222 908 aa29.34■■■□□ 2.29
CACNB3-208ENST00000548279 ALDH1L1O75891 902 aa29.33■■■□□ 2.29
CACNB3-208ENST00000548279 ATP2B4P23634 1241 aa29.33■■■□□ 2.29
CACNB3-208ENST00000548279 MIER1Q8N108 512 aa29.33■■■□□ 2.29
CACNB3-208ENST00000548279 SRCIN1Q9C0H9 1055 aa29.33■■■□□ 2.29
CACNB3-208ENST00000548279 CREBZFQ9NS37 354 aa29.33■■■□□ 2.29
CACNB3-208ENST00000548279 IGHMBP2P38935 993 aaKnown RBP29.32■■■□□ 2.28
CACNB3-208ENST00000548279 FMR1Q06787 632 aaKnown RBP eCLIP29.32■■■□□ 2.28
CACNB3-208ENST00000548279 JMYQ8N9B5 988 aa29.32■■■□□ 2.28
CACNB3-208ENST00000548279 TRPM4Q8TD43 1214 aa29.32■■■□□ 2.28
CACNB3-208ENST00000548279 CNOT7Q9UIV1 285 aaKnown RBP29.32■■■□□ 2.28
CACNB3-208ENST00000548279 PSME4Q14997 1843 aa29.31■■■□□ 2.28
CACNB3-208ENST00000548279 HIRAP54198 1017 aaPredicted RBP29.31■■■□□ 2.28
CACNB3-208ENST00000548279 A0A1B0GUL6 1792 aa29.31■■■□□ 2.28
CACNB3-208ENST00000548279 CCT4P50991 539 aaKnown RBP29.3■■■□□ 2.28
CACNB3-208ENST00000548279 DIEXFQ68CQ4 756 aaKnown RBP29.3■■■□□ 2.28
CACNB3-208ENST00000548279 MICALL2Q8IY33 904 aa29.3■■■□□ 2.28
CACNB3-208ENST00000548279 LMBR1LQ6UX01 489 aa29.29■■■□□ 2.28
CACNB3-208ENST00000548279 C9orf78Q9NZ63 289 aaPredicted RBP29.29■■■□□ 2.28
CACNB3-208ENST00000548279 MED23Q9ULK4 1368 aa29.28■■■□□ 2.28
CACNB3-208ENST00000548279 PTPRCP08575 1304 aa29.28■■■□□ 2.28
CACNB3-208ENST00000548279 ANKRD18BA2A2Z9 1011 aa29.28■■■□□ 2.28
CACNB3-208ENST00000548279 DPF2Q92785 391 aa29.28■■■□□ 2.28
CACNB3-208ENST00000548279 KAZALD1Q96I82 304 aa29.28■■■□□ 2.28
CACNB3-208ENST00000548279 SUCLG2Q96I99 432 aa29.28■■■□□ 2.28
CACNB3-208ENST00000548279 CHMP3Q9Y3E7 222 aa29.28■■■□□ 2.28
CACNB3-208ENST00000548279 ZNF646O15015 1829 aaPredicted RBP29.28■■■□□ 2.28
CACNB3-208ENST00000548279 VIL1P09327 827 aaKnown RBP29.27■■■□□ 2.28
CACNB3-208ENST00000548279 NBPF7P0C2Y1 421 aaPredicted RBP29.27■■■□□ 2.28
CACNB3-208ENST00000548279 TXNRD3Q86VQ6 643 aa29.27■■■□□ 2.28
CACNB3-208ENST00000548279 MPHOSPH8Q99549 860 aa29.27■■■□□ 2.28
CACNB3-208ENST00000548279 TMEM88BA6NKF7 163 aa29.26■■■□□ 2.27
CACNB3-208ENST00000548279 G3V3G9 751 aa29.26■■■□□ 2.27
CACNB3-208ENST00000548279 TRAF5O00463 557 aa29.26■■■□□ 2.27
CACNB3-208ENST00000548279 EGFRP00533 1210 aa29.26■■■□□ 2.27
CACNB3-208ENST00000548279 ALDH1L2Q3SY69 923 aa29.26■■■□□ 2.27
CACNB3-208ENST00000548279 DCAF8Q5TAQ9 597 aa29.26■■■□□ 2.27
CACNB3-208ENST00000548279 MKRN1Q9UHC7 482 aaKnown RBP29.26■■■□□ 2.27
CACNB3-208ENST00000548279 KLRK1P26718 216 aa29.25■■■□□ 2.27
CACNB3-208ENST00000548279 CHRNDQ07001 517 aa29.25■■■□□ 2.27
CACNB3-208ENST00000548279 IFIT5Q13325 482 aaKnown RBP29.25■■■□□ 2.27
CACNB3-208ENST00000548279 SAMD7Q7Z3H4 446 aa29.25■■■□□ 2.27
CACNB3-208ENST00000548279 ZNF594Q96JF6 807 aaPredicted RBP29.25■■■□□ 2.27
CACNB3-208ENST00000548279 SMC4Q9NTJ3 1288 aa29.25■■■□□ 2.27
CACNB3-208ENST00000548279 UTYO14607 1347 aa29.24■■■□□ 2.27
CACNB3-208ENST00000548279 RPS12P25398 132 aaKnown RBP29.24■■■□□ 2.27
CACNB3-208ENST00000548279 PGAP2Q9UHJ9 254 aa29.24■■■□□ 2.27
CACNB3-208ENST00000548279 LEMD3Q9Y2U8 911 aa29.24■■■□□ 2.27
CACNB3-208ENST00000548279 H7C1D1 291 aa29.23■■■□□ 2.27
CACNB3-208ENST00000548279 SNAP23O00161 211 aa29.23■■■□□ 2.27
CACNB3-208ENST00000548279 TRPM7Q96QT4 1865 aa29.23■■■□□ 2.27
CACNB3-208ENST00000548279 ZNF804BA4D1E1 1349 aa29.22■■■□□ 2.27
CACNB3-208ENST00000548279 TBC1D10BQ4KMP7 808 aaPredicted RBP29.22■■■□□ 2.27
CACNB3-208ENST00000548279 HELBQ8NG08 1087 aaPredicted RBP29.22■■■□□ 2.27
CACNB3-208ENST00000548279 ANKRD2Q9GZV1 360 aa29.22■■■□□ 2.27
CACNB3-208ENST00000548279 CNTNAP1P78357 1384 aa29.22■■■□□ 2.27
CACNB3-208ENST00000548279 ZNF609O15014 1411 aa29.21■■■□□ 2.27
CACNB3-208ENST00000548279 PODNQ7Z5L7 613 aa29.21■■■□□ 2.27
CACNB3-208ENST00000548279 GLIS2Q9BZE0 524 aaPredicted RBP29.21■■■□□ 2.27
CACNB3-208ENST00000548279 TAF5LO75529 589 aa29.2■■■□□ 2.26
CACNB3-208ENST00000548279 RSBN1LQ6PCB5 846 aaPredicted RBP29.2■■■□□ 2.26
CACNB3-208ENST00000548279 IRS2Q9Y4H2 1338 aa29.2■■■□□ 2.26
CACNB3-208ENST00000548279 CT47B1P0C2W7 299 aaPredicted RBP29.19■■■□□ 2.26
CACNB3-208ENST00000548279 CCDC57Q2TAC2 916 aa29.19■■■□□ 2.26
CACNB3-208ENST00000548279 ZC3H15Q8WU90 426 aaKnown RBP29.19■■■□□ 2.26
CACNB3-208ENST00000548279 GMLQ99445 158 aa29.19■■■□□ 2.26
CACNB3-208ENST00000548279 USP17L3A6NCW0 530 aa29.18■■■□□ 2.26
CACNB3-208ENST00000548279 USP17L4A6NCW7 530 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms