RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 DOK7Q18PE1 504 aa20.71■□□□□ 0.91
SVOP-202ENST00000548229 CELF1Q92879 486 aaKnown RBP20.71■□□□□ 0.91
SVOP-202ENST00000548229 CDCA5Q96FF9 252 aa20.71■□□□□ 0.91
SVOP-202ENST00000548229 HDAC9Q9UKV0 1011 aa20.71■□□□□ 0.91
SVOP-202ENST00000548229 HPS5Q9UPZ3 1129 aa20.71■□□□□ 0.91
SVOP-202ENST00000548229 GPSM2P81274 684 aa20.7■□□□□ 0.9
SVOP-202ENST00000548229 RTL9Q8NET4 1388 aa20.7■□□□□ 0.9
SVOP-202ENST00000548229 HSP90B1P14625 803 aaKnown RBP20.69■□□□□ 0.9
SVOP-202ENST00000548229 RIPK4P57078 832 aa20.69■□□□□ 0.9
SVOP-202ENST00000548229 RPS8P62241 208 aaKnown RBP20.69■□□□□ 0.9
SVOP-202ENST00000548229 RASAL3Q86YV0 1011 aa20.69■□□□□ 0.9
SVOP-202ENST00000548229 AGBL3Q8NEM8 1001 aa20.69■□□□□ 0.9
SVOP-202ENST00000548229 PLBD2Q8NHP8 589 aa20.69■□□□□ 0.9
SVOP-202ENST00000548229 TBC1D16Q8TBP0 767 aa20.69■□□□□ 0.9
SVOP-202ENST00000548229 GCC1Q96CN9 775 aa20.69■□□□□ 0.9
SVOP-202ENST00000548229 KCNQ5Q9NR82 932 aa20.69■□□□□ 0.9
SVOP-202ENST00000548229 ZNF280AP59817 542 aaPredicted RBP20.68■□□□□ 0.9
SVOP-202ENST00000548229 ANKRD13DQ6ZTN6 518 aa20.68■□□□□ 0.9
SVOP-202ENST00000548229 PODXL2Q9NZ53 605 aa20.68■□□□□ 0.9
SVOP-202ENST00000548229 DDX60Q8IY21 1712 aaKnown RBP20.67■□□□□ 0.9
SVOP-202ENST00000548229 TAF1P21675 1872 aa20.67■□□□□ 0.9
SVOP-202ENST00000548229 SCARF1Q14162 830 aa20.67■□□□□ 0.9
SVOP-202ENST00000548229 NOM1Q5C9Z4 860 aaKnown RBP20.67■□□□□ 0.9
SVOP-202ENST00000548229 ANGEL2Q5VTE6 544 aaKnown RBP20.67■□□□□ 0.9
SVOP-202ENST00000548229 FAM89AQ96GI7 184 aa20.67■□□□□ 0.9
SVOP-202ENST00000548229 PITPNM2Q9BZ72 1349 aa20.67■□□□□ 0.9
SVOP-202ENST00000548229 RSBN1LQ6PCB5 846 aaPredicted RBP20.66■□□□□ 0.9
SVOP-202ENST00000548229 ISCA1Q9BUE6 129 aa20.66■□□□□ 0.9
SVOP-202ENST00000548229 ZNF609O15014 1411 aa20.66■□□□□ 0.9
SVOP-202ENST00000548229 TRIM28Q13263 835 aaKnown RBP20.65■□□□□ 0.9
SVOP-202ENST00000548229 ZNF296Q8WUU4 475 aaPredicted RBP20.65■□□□□ 0.9
SVOP-202ENST00000548229 ANKIB1Q9P2G1 1089 aa20.65■□□□□ 0.9
SVOP-202ENST00000548229 GGA1Q9UJY5 639 aa20.65■□□□□ 0.9
SVOP-202ENST00000548229 IRS4O14654 1257 aaPredicted RBP20.64■□□□□ 0.89
SVOP-202ENST00000548229 UFL1O94874 794 aa20.63■□□□□ 0.89
SVOP-202ENST00000548229 USP17L8P0C7I0 530 aa20.63■□□□□ 0.89
SVOP-202ENST00000548229 FBXO46Q6PJ61 603 aaPredicted RBP20.63■□□□□ 0.89
SVOP-202ENST00000548229 CHPF2Q9P2E5 772 aa20.63■□□□□ 0.89
SVOP-202ENST00000548229 DBF4Q9UBU7 674 aaPredicted RBP20.63■□□□□ 0.89
SVOP-202ENST00000548229 PAPPA2Q9BXP8 1791 aa20.63■□□□□ 0.89
SVOP-202ENST00000548229 ASTN2O75129 1339 aaPredicted RBP20.62■□□□□ 0.89
SVOP-202ENST00000548229 ATP5J2-PTCD1G3V325 749 aa20.62■□□□□ 0.89
SVOP-202ENST00000548229 HOXB7P09629 217 aa20.62■□□□□ 0.89
SVOP-202ENST00000548229 TM4SF4P48230 202 aa20.62■□□□□ 0.89
SVOP-202ENST00000548229 MYOZ2Q9NPC6 264 aa20.62■□□□□ 0.89
SVOP-202ENST00000548229 TBC1D8O95759 1140 aa20.61■□□□□ 0.89
SVOP-202ENST00000548229 HDGFL1Q5TGJ6 251 aa20.61■□□□□ 0.89
SVOP-202ENST00000548229 HYPKQ9NX55 129 aa20.61■□□□□ 0.89
SVOP-202ENST00000548229 GPR25O00155 361 aa20.6■□□□□ 0.89
SVOP-202ENST00000548229 CHL1O00533 1208 aa20.6■□□□□ 0.89
SVOP-202ENST00000548229 NF2P35240 595 aa20.6■□□□□ 0.89
SVOP-202ENST00000548229 TMPOP42166 694 aaKnown RBP20.6■□□□□ 0.89
SVOP-202ENST00000548229 SREBF2Q12772 1141 aa20.6■□□□□ 0.89
SVOP-202ENST00000548229 PODNQ7Z5L7 613 aa20.6■□□□□ 0.89
SVOP-202ENST00000548229 ZNF428Q96B54 188 aa20.6■□□□□ 0.89
SVOP-202ENST00000548229 USP17L3A6NCW0 530 aa20.59■□□□□ 0.89
SVOP-202ENST00000548229 USP17L4A6NCW7 530 aa20.59■□□□□ 0.89
SVOP-202ENST00000548229 MMP14P50281 582 aa20.59■□□□□ 0.89
SVOP-202ENST00000548229 TTLL12Q14166 644 aaPredicted RBP20.59■□□□□ 0.89
SVOP-202ENST00000548229 RTL5Q5HYW3 569 aaPredicted RBP20.59■□□□□ 0.89
SVOP-202ENST00000548229 USP17L1Q7RTZ2 530 aa20.59■□□□□ 0.89
SVOP-202ENST00000548229 ZBTB38Q8NAP3 1195 aaPredicted RBP20.59■□□□□ 0.89
SVOP-202ENST00000548229 GMLQ99445 158 aa20.59■□□□□ 0.89
SVOP-202ENST00000548229 SCN9AQ15858 1988 aa20.59■□□□□ 0.89
SVOP-202ENST00000548229 UBE2Q2LH0YL09 131 aa20.58■□□□□ 0.89
SVOP-202ENST00000548229 CCDC152Q4G0S7 254 aa20.58■□□□□ 0.89
SVOP-202ENST00000548229 OGFOD1Q8N543 542 aa20.58■□□□□ 0.89
SVOP-202ENST00000548229 CFHR5Q9BXR6 569 aa20.58■□□□□ 0.89
SVOP-202ENST00000548229 MKI67P46013 3256 aaKnown RBP20.58■□□□□ 0.88
SVOP-202ENST00000548229 XDHP47989 1333 aa20.57■□□□□ 0.88
SVOP-202ENST00000548229 FKTNO75072 461 aa20.57■□□□□ 0.88
SVOP-202ENST00000548229 ALDH1A1P00352 501 aa20.56■□□□□ 0.88
SVOP-202ENST00000548229 ATP2B4P23634 1241 aa20.56■□□□□ 0.88
SVOP-202ENST00000548229 INTS3Q68E01 1043 aaKnown RBP20.55■□□□□ 0.88
SVOP-202ENST00000548229 SEC31BQ9NQW1 1179 aa20.55■□□□□ 0.88
SVOP-202ENST00000548229 LAS1LQ9Y4W2 734 aaKnown RBP20.55■□□□□ 0.88
SVOP-202ENST00000548229 GOLGA2Q08379 1002 aa20.54■□□□□ 0.88
SVOP-202ENST00000548229 KRT24Q2M2I5 525 aa20.54■□□□□ 0.88
SVOP-202ENST00000548229 MOB2Q70IA6 237 aa20.54■□□□□ 0.88
SVOP-202ENST00000548229 ARMC9Q7Z3E5 817 aa20.54■□□□□ 0.88
SVOP-202ENST00000548229 RIC3Q7Z5B4 369 aa20.54■□□□□ 0.88
SVOP-202ENST00000548229 ANKRD18AQ8IVF6 992 aa20.54■□□□□ 0.88
SVOP-202ENST00000548229 MYO3BQ8WXR4 1341 aa20.53■□□□□ 0.88
SVOP-202ENST00000548229 PDE8AO60658 829 aa20.53■□□□□ 0.88
SVOP-202ENST00000548229 INHBEP58166 350 aa20.53■□□□□ 0.88
SVOP-202ENST00000548229 CCDC191Q8NCU4 936 aa20.53■□□□□ 0.88
SVOP-202ENST00000548229 NBPF9Q3BBW0 867 aa20.52■□□□□ 0.88
SVOP-202ENST00000548229 CENPFP49454 3210 aa20.52■□□□□ 0.88
SVOP-202ENST00000548229 HTTP42858 3142 aa20.51■□□□□ 0.87
SVOP-202ENST00000548229 PSME4Q14997 1843 aa20.51■□□□□ 0.87
SVOP-202ENST00000548229 PCCAP05165 728 aaPredicted RBP20.51■□□□□ 0.87
SVOP-202ENST00000548229 NEUROD2Q15784 382 aa20.51■□□□□ 0.87
SVOP-202ENST00000548229 COL4A1P02462 1669 aa20.51■□□□□ 0.87
SVOP-202ENST00000548229 WNT10BO00744 389 aa20.5■□□□□ 0.87
SVOP-202ENST00000548229 PRAMEF18Q5VWM3 479 aa20.5■□□□□ 0.87
SVOP-202ENST00000548229 CDC5LQ99459 802 aaKnown RBP20.5■□□□□ 0.87
SVOP-202ENST00000548229 PTPN12Q05209 780 aaKnown RBP20.49■□□□□ 0.87
SVOP-202ENST00000548229 MKRN3Q13064 507 aaKnown RBP20.49■□□□□ 0.87
SVOP-202ENST00000548229 HABP4Q5JVS0 413 aaKnown RBP20.49■□□□□ 0.87
SVOP-202ENST00000548229 STRIP1Q5VSL9 837 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms