RNA–Protein interactions for RNA: ENST00000548161.1

R3HDM2-212, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 802 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-212ENST00000548161 RGMBQ6NW40 437 aa11.03□□□□□ -0.64
R3HDM2-212ENST00000548161 TBC1D16Q8TBP0 767 aa11.03□□□□□ -0.64
R3HDM2-212ENST00000548161 EYA3Q99504 573 aa11.03□□□□□ -0.64
R3HDM2-212ENST00000548161 RTL9Q8NET4 1388 aa11.03□□□□□ -0.64
R3HDM2-212ENST00000548161 FAM155AB1AL88 458 aaPredicted RBP11.02□□□□□ -0.65
R3HDM2-212ENST00000548161 SLC34A2O95436 690 aa11.02□□□□□ -0.65
R3HDM2-212ENST00000548161 VIL1P09327 827 aaKnown RBP11.02□□□□□ -0.65
R3HDM2-212ENST00000548161 DOK7Q18PE1 504 aa11.02□□□□□ -0.65
R3HDM2-212ENST00000548161 RTL5Q5HYW3 569 aaPredicted RBP11.02□□□□□ -0.65
R3HDM2-212ENST00000548161 RBM26Q5T8P6 1007 aaKnown RBP11.02□□□□□ -0.65
R3HDM2-212ENST00000548161 DUSP27Q5VZP5 1158 aa11.02□□□□□ -0.65
R3HDM2-212ENST00000548161 C2orf69Q8N8R5 385 aa11.02□□□□□ -0.65
R3HDM2-212ENST00000548161 CCDC102AQ96A19 550 aa11.02□□□□□ -0.65
R3HDM2-212ENST00000548161 DCPSQ96C86 337 aaKnown RBP11.02□□□□□ -0.65
R3HDM2-212ENST00000548161 CFAP44Q96MT7 982 aa11.02□□□□□ -0.65
R3HDM2-212ENST00000548161 ZC3H12CQ9C0D7 883 aaKnown RBP11.02□□□□□ -0.65
R3HDM2-212ENST00000548161 GBA2Q9HCG7 927 aaPredicted RBP11.02□□□□□ -0.65
R3HDM2-212ENST00000548161 PODXL2Q9NZ53 605 aa11.02□□□□□ -0.65
R3HDM2-212ENST00000548161 HSP90B1P14625 803 aaKnown RBP11.01□□□□□ -0.65
R3HDM2-212ENST00000548161 DGKZQ13574 1117 aa11.01□□□□□ -0.65
R3HDM2-212ENST00000548161 ZBTB38Q8NAP3 1195 aaPredicted RBP11.01□□□□□ -0.65
R3HDM2-212ENST00000548161 ADAMTS8Q9UP79 889 aa11.01□□□□□ -0.65
R3HDM2-212ENST00000548161 MYBBP1AQ9BQG0 1328 aaKnown RBP11.01□□□□□ -0.65
R3HDM2-212ENST00000548161 COL4A1P02462 1669 aa11.01□□□□□ -0.65
R3HDM2-212ENST00000548161 SCN9AQ15858 1988 aa11□□□□□ -0.65
R3HDM2-212ENST00000548161 ADM5C9JUS6 153 aa11□□□□□ -0.65
R3HDM2-212ENST00000548161 ZNF157P51786 506 aaPredicted RBP11□□□□□ -0.65
R3HDM2-212ENST00000548161 KIF23Q02241 960 aaPredicted RBP11□□□□□ -0.65
R3HDM2-212ENST00000548161 RIC3Q7Z5B4 369 aa11□□□□□ -0.65
R3HDM2-212ENST00000548161 MBIPQ9NS73 344 aa11□□□□□ -0.65
R3HDM2-212ENST00000548161 SAGE1Q9NXZ1 904 aa11□□□□□ -0.65
R3HDM2-212ENST00000548161 ZNF853P0CG23 659 aa10.99□□□□□ -0.65
R3HDM2-212ENST00000548161 ZNF280AP59817 542 aaPredicted RBP10.99□□□□□ -0.65
R3HDM2-212ENST00000548161 WDR43Q15061 677 aaKnown RBP eCLIP10.99□□□□□ -0.65
R3HDM2-212ENST00000548161 KIF4BQ2VIQ3 1234 aa10.99□□□□□ -0.65
R3HDM2-212ENST00000548161 SULF1Q8IWU6 871 aa10.99□□□□□ -0.65
R3HDM2-212ENST00000548161 AGBL3Q8NEM8 1001 aa10.99□□□□□ -0.65
R3HDM2-212ENST00000548161 SEC31BQ9NQW1 1179 aa10.99□□□□□ -0.65
R3HDM2-212ENST00000548161 ANKIB1Q9P2G1 1089 aa10.99□□□□□ -0.65
R3HDM2-212ENST00000548161 UFL1O94874 794 aa10.98□□□□□ -0.65
R3HDM2-212ENST00000548161 GOLGA2Q08379 1002 aa10.98□□□□□ -0.65
R3HDM2-212ENST00000548161 SCARF1Q14162 830 aa10.98□□□□□ -0.65
R3HDM2-212ENST00000548161 CCDC152Q4G0S7 254 aa10.98□□□□□ -0.65
R3HDM2-212ENST00000548161 CCDC191Q8NCU4 936 aa10.98□□□□□ -0.65
R3HDM2-212ENST00000548161 CSRNP1Q96S65 589 aa10.98□□□□□ -0.65
R3HDM2-212ENST00000548161 GMLQ99445 158 aa10.98□□□□□ -0.65
R3HDM2-212ENST00000548161 PHAXQ9H814 394 aaKnown RBP10.98□□□□□ -0.65
R3HDM2-212ENST00000548161 RNF186Q9NXI6 227 aa10.98□□□□□ -0.65
R3HDM2-212ENST00000548161 GGA3Q9NZ52 723 aa10.98□□□□□ -0.65
R3HDM2-212ENST00000548161 GGA1Q9UJY5 639 aa10.98□□□□□ -0.65
R3HDM2-212ENST00000548161 ASTN2O75129 1339 aaPredicted RBP10.98□□□□□ -0.65
R3HDM2-212ENST00000548161 G3V3G9 751 aa10.97□□□□□ -0.65
R3HDM2-212ENST00000548161 PDE8AO60658 829 aa10.97□□□□□ -0.65
R3HDM2-212ENST00000548161 TRPA1O75762 1119 aa10.97□□□□□ -0.65
R3HDM2-212ENST00000548161 PCCAP05165 728 aaPredicted RBP10.97□□□□□ -0.65
R3HDM2-212ENST00000548161 SLC10A3P09131 477 aa10.97□□□□□ -0.65
R3HDM2-212ENST00000548161 DDX10Q13206 875 aaKnown RBP10.97□□□□□ -0.65
R3HDM2-212ENST00000548161 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
R3HDM2-212ENST00000548161 RSBN1LQ6PCB5 846 aaPredicted RBP10.97□□□□□ -0.65
R3HDM2-212ENST00000548161 CDCA5Q96FF9 252 aa10.97□□□□□ -0.65
R3HDM2-212ENST00000548161 MYD88Q99836 296 aa10.97□□□□□ -0.65
R3HDM2-212ENST00000548161 ZNF609O15014 1411 aa10.97□□□□□ -0.65
R3HDM2-212ENST00000548161 AKAP11Q9UKA4 1901 aa10.97□□□□□ -0.65
R3HDM2-212ENST00000548161 XDHP47989 1333 aa10.96□□□□□ -0.65
R3HDM2-212ENST00000548161 ELL2O00472 640 aaPredicted RBP10.96□□□□□ -0.65
R3HDM2-212ENST00000548161 ANGEL2Q5VTE6 544 aaKnown RBP10.96□□□□□ -0.65
R3HDM2-212ENST00000548161 PODNQ7Z5L7 613 aa10.96□□□□□ -0.65
R3HDM2-212ENST00000548161 REM2Q8IYK8 340 aaPredicted RBP10.96□□□□□ -0.65
R3HDM2-212ENST00000548161 IFT57Q9NWB7 429 aa10.96□□□□□ -0.65
R3HDM2-212ENST00000548161 CWC25Q9NXE8 425 aaPredicted RBP10.96□□□□□ -0.65
R3HDM2-212ENST00000548161 USP17L3A6NCW0 530 aa10.95□□□□□ -0.66
R3HDM2-212ENST00000548161 USP17L4A6NCW7 530 aa10.95□□□□□ -0.66
R3HDM2-212ENST00000548161 USP17L8P0C7I0 530 aa10.95□□□□□ -0.66
R3HDM2-212ENST00000548161 ATP2B4P23634 1241 aa10.95□□□□□ -0.66
R3HDM2-212ENST00000548161 GNAI1P63096 354 aa10.95□□□□□ -0.66
R3HDM2-212ENST00000548161 FKBP1BP68106 108 aa10.95□□□□□ -0.66
R3HDM2-212ENST00000548161 USP17L1Q7RTZ2 530 aa10.95□□□□□ -0.66
R3HDM2-212ENST00000548161 ANKRD18AQ8IVF6 992 aa10.95□□□□□ -0.66
R3HDM2-212ENST00000548161 C8orf58Q8NAV2 365 aa10.95□□□□□ -0.66
R3HDM2-212ENST00000548161 JARID2Q92833 1246 aaPredicted RBP10.95□□□□□ -0.66
R3HDM2-212ENST00000548161 CCDC85AQ96PX6 553 aaPredicted RBP10.95□□□□□ -0.66
R3HDM2-212ENST00000548161 METTL22Q9BUU2 404 aaPredicted RBP10.95□□□□□ -0.66
R3HDM2-212ENST00000548161 MYOZ2Q9NPC6 264 aa10.95□□□□□ -0.66
R3HDM2-212ENST00000548161 PITPNM2Q9BZ72 1349 aa10.94□□□□□ -0.66
R3HDM2-212ENST00000548161 PSME4Q14997 1843 aa10.94□□□□□ -0.66
R3HDM2-212ENST00000548161 APAF1O14727 1248 aa10.94□□□□□ -0.66
R3HDM2-212ENST00000548161 CALD1Q05682 793 aaKnown RBP10.94□□□□□ -0.66
R3HDM2-212ENST00000548161 RASAL3Q86YV0 1011 aa10.94□□□□□ -0.66
R3HDM2-212ENST00000548161 CHMP4AQ9BY43 222 aa10.94□□□□□ -0.66
R3HDM2-212ENST00000548161 HTTP42858 3142 aa10.93□□□□□ -0.66
R3HDM2-212ENST00000548161 WTIPA6NIX2 430 aaPredicted RBP10.93□□□□□ -0.66
R3HDM2-212ENST00000548161 DDX58O95786 925 aaKnown RBP10.93□□□□□ -0.66
R3HDM2-212ENST00000548161 CCDC30Q5VVM6 783 aa10.93□□□□□ -0.66
R3HDM2-212ENST00000548161 CTU1Q7Z7A3 348 aaKnown RBP10.93□□□□□ -0.66
R3HDM2-212ENST00000548161 CDC5LQ99459 802 aaKnown RBP10.93□□□□□ -0.66
R3HDM2-212ENST00000548161 BSDC1Q9NW68 430 aaPredicted RBP10.93□□□□□ -0.66
R3HDM2-212ENST00000548161 MINPP1Q9UNW1 487 aa10.93□□□□□ -0.66
R3HDM2-212ENST00000548161 CENPFP49454 3210 aa10.93□□□□□ -0.66
R3HDM2-212ENST00000548161 MKI67P46013 3256 aaKnown RBP10.92□□□□□ -0.66
R3HDM2-212ENST00000548161 PI4KAP2A4QPH2 592 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms