RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 RNF214Q8ND24 703 aa18.46■□□□□ 0.55
BRF1-212ENST00000547562 PIGBQ92521 554 aa18.45■□□□□ 0.54
BRF1-212ENST00000547562 PUS3Q9BZE2 481 aaKnown RBP18.45■□□□□ 0.54
BRF1-212ENST00000547562 ASAP1Q9ULH1 1129 aa18.45■□□□□ 0.54
BRF1-212ENST00000547562 ZNF330Q9Y3S2 320 aaPredicted RBP18.45■□□□□ 0.54
BRF1-212ENST00000547562 CDC37L1Q7L3B6 337 aa18.45■□□□□ 0.54
BRF1-212ENST00000547562 DNAJC10Q8IXB1 793 aa18.45■□□□□ 0.54
BRF1-212ENST00000547562 LETM1O95202 739 aaPredicted RBP18.44■□□□□ 0.54
BRF1-212ENST00000547562 IFIT1P09914 478 aaKnown RBP18.44■□□□□ 0.54
BRF1-212ENST00000547562 STK3Q13188 491 aa18.44■□□□□ 0.54
BRF1-212ENST00000547562 CCDC57Q2TAC2 916 aa18.44■□□□□ 0.54
BRF1-212ENST00000547562 KIF6Q6ZMV9 814 aa18.44■□□□□ 0.54
BRF1-212ENST00000547562 ZMYM1Q5SVZ6 1142 aa18.44■□□□□ 0.54
BRF1-212ENST00000547562 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.44■□□□□ 0.54
BRF1-212ENST00000547562 GTF3C6Q969F1 213 aa18.44■□□□□ 0.54
BRF1-212ENST00000547562 DSCC1Q9BVC3 393 aa18.44■□□□□ 0.54
BRF1-212ENST00000547562 CEP126Q9P2H0 1117 aa18.44■□□□□ 0.54
BRF1-212ENST00000547562 FBXO3Q9UK99 471 aa18.44■□□□□ 0.54
BRF1-212ENST00000547562 Q6ZUG5 572 aa18.43■□□□□ 0.54
BRF1-212ENST00000547562 PCCAP05165 728 aaPredicted RBP18.43■□□□□ 0.54
BRF1-212ENST00000547562 SLFNL1Q499Z3 407 aa18.43■□□□□ 0.54
BRF1-212ENST00000547562 KAT6BQ8WYB5 2073 aa18.43■□□□□ 0.54
BRF1-212ENST00000547562 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.42■□□□□ 0.54
BRF1-212ENST00000547562 STARD3NLO95772 234 aa18.42■□□□□ 0.54
BRF1-212ENST00000547562 TPRNQ4KMQ1 711 aa18.42■□□□□ 0.54
BRF1-212ENST00000547562 PLA2G12BQ9BX93 195 aa18.42■□□□□ 0.54
BRF1-212ENST00000547562 BTG4Q9NY30 223 aa18.42■□□□□ 0.54
BRF1-212ENST00000547562 HMGB1P09429 215 aaKnown RBP18.42■□□□□ 0.54
BRF1-212ENST00000547562 KRT85P78386 507 aa18.42■□□□□ 0.54
BRF1-212ENST00000547562 STOX1Q6ZVD7 989 aa18.42■□□□□ 0.54
BRF1-212ENST00000547562 FAM184AQ8NB25 1140 aa18.42■□□□□ 0.54
BRF1-212ENST00000547562 FERMT3Q86UX7 667 aa18.41■□□□□ 0.54
BRF1-212ENST00000547562 ZBTB38Q8NAP3 1195 aaPredicted RBP18.41■□□□□ 0.54
BRF1-212ENST00000547562 FAM89AQ96GI7 184 aa18.41■□□□□ 0.54
BRF1-212ENST00000547562 RNF113AO15541 343 aaKnown RBP18.41■□□□□ 0.54
BRF1-212ENST00000547562 KLHL34Q8N239 644 aa18.41■□□□□ 0.54
BRF1-212ENST00000547562 AKAP2Q9Y2D5 859 aa18.41■□□□□ 0.54
BRF1-212ENST00000547562 CSF1RP07333 972 aa18.4■□□□□ 0.54
BRF1-212ENST00000547562 MSNP26038 577 aaKnown RBP18.4■□□□□ 0.54
BRF1-212ENST00000547562 MAST3O60307 1309 aa18.4■□□□□ 0.54
BRF1-212ENST00000547562 MAP3K15Q6ZN16 1313 aa18.4■□□□□ 0.54
BRF1-212ENST00000547562 MYH3P11055 1940 aa18.4■□□□□ 0.54
BRF1-212ENST00000547562 HSPD1P10809 573 aaKnown RBP18.4■□□□□ 0.54
BRF1-212ENST00000547562 HSP90B1P14625 803 aaKnown RBP18.4■□□□□ 0.54
BRF1-212ENST00000547562 GIGYF2Q6Y7W6 1299 aaKnown RBP18.4■□□□□ 0.54
BRF1-212ENST00000547562 ANKRD36CQ5JPF3 1778 aa18.4■□□□□ 0.54
BRF1-212ENST00000547562 ELP1O95163 1332 aa18.4■□□□□ 0.54
BRF1-212ENST00000547562 DISP2A7MBM2 1401 aa18.39■□□□□ 0.54
BRF1-212ENST00000547562 CCDC158Q5M9N0 1113 aa18.39■□□□□ 0.53
BRF1-212ENST00000547562 DHX32Q7L7V1 743 aaKnown RBP18.39■□□□□ 0.53
BRF1-212ENST00000547562 TTC6Q86TZ1 520 aa18.39■□□□□ 0.53
BRF1-212ENST00000547562 BRF1Q92994 677 aa18.39■□□□□ 0.53
BRF1-212ENST00000547562 NOL7Q9UMY1 257 aaKnown RBP18.39■□□□□ 0.53
BRF1-212ENST00000547562 COL14A1Q05707 1796 aaKnown RBP18.39■□□□□ 0.53
BRF1-212ENST00000547562 JAK2O60674 1132 aa18.39■□□□□ 0.53
BRF1-212ENST00000547562 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.53
BRF1-212ENST00000547562 UVSSAQ2YD98 709 aa18.39■□□□□ 0.53
BRF1-212ENST00000547562 XAGE2Q96GT9 111 aa18.39■□□□□ 0.53
BRF1-212ENST00000547562 MYH7P12883 1935 aa18.38■□□□□ 0.53
BRF1-212ENST00000547562 KDM4FA0A1W2PPD8 638 aa18.38■□□□□ 0.53
BRF1-212ENST00000547562 TAF7LQ5H9L4 462 aa18.38■□□□□ 0.53
BRF1-212ENST00000547562 TTC39AQ5SRH9 613 aa18.38■□□□□ 0.53
BRF1-212ENST00000547562 CCDC85AQ96PX6 553 aaPredicted RBP18.38■□□□□ 0.53
BRF1-212ENST00000547562 LRRC2Q9BYS8 371 aa18.38■□□□□ 0.53
BRF1-212ENST00000547562 BCL9O00512 1426 aa18.38■□□□□ 0.53
BRF1-212ENST00000547562 LRP6O75581 1613 aa18.38■□□□□ 0.53
BRF1-212ENST00000547562 ADORA1P30542 326 aa18.38■□□□□ 0.53
BRF1-212ENST00000547562 FGD1P98174 961 aa18.38■□□□□ 0.53
BRF1-212ENST00000547562 FKBP4Q02790 459 aaKnown RBP eCLIP18.38■□□□□ 0.53
BRF1-212ENST00000547562 GORABQ5T7V8 394 aa18.38■□□□□ 0.53
BRF1-212ENST00000547562 FAM173BQ6P4H8 233 aa18.38■□□□□ 0.53
BRF1-212ENST00000547562 CDHR2Q9BYE9 1310 aa18.38■□□□□ 0.53
BRF1-212ENST00000547562 LRRFIP1Q32MZ4 808 aaKnown RBP18.37■□□□□ 0.53
BRF1-212ENST00000547562 SCAND2PQ9GZW5 306 aaPredicted RBP18.37■□□□□ 0.53
BRF1-212ENST00000547562 PLCH1Q4KWH8 1693 aa18.37■□□□□ 0.53
BRF1-212ENST00000547562 NUP98P52948 1817 aa18.37■□□□□ 0.53
BRF1-212ENST00000547562 M0R2C6 588 aa18.37■□□□□ 0.53
BRF1-212ENST00000547562 PFKFB2O60825 505 aa18.37■□□□□ 0.53
BRF1-212ENST00000547562 EXOSC10Q01780 885 aaKnown RBP18.37■□□□□ 0.53
BRF1-212ENST00000547562 SCRN1Q12765 414 aa18.37■□□□□ 0.53
BRF1-212ENST00000547562 HLFQ16534 295 aa18.37■□□□□ 0.53
BRF1-212ENST00000547562 FUCA2Q9BTY2 467 aa18.37■□□□□ 0.53
BRF1-212ENST00000547562 E7EWF7 191 aa18.36■□□□□ 0.53
BRF1-212ENST00000547562 NLRP10Q86W26 655 aa18.36■□□□□ 0.53
BRF1-212ENST00000547562 NAP1L5Q96NT1 182 aaPredicted RBP18.36■□□□□ 0.53
BRF1-212ENST00000547562 LLPHQ9BRT6 129 aaKnown RBP18.36■□□□□ 0.53
BRF1-212ENST00000547562 AGXT2Q9BYV1 514 aa18.36■□□□□ 0.53
BRF1-212ENST00000547562 CCDC39Q9UFE4 941 aa18.36■□□□□ 0.53
BRF1-212ENST00000547562 CYP19A1P11511 503 aaPredicted RBP18.35■□□□□ 0.53
BRF1-212ENST00000547562 HCLS1P14317 486 aaPredicted RBP18.35■□□□□ 0.53
BRF1-212ENST00000547562 HSP90AB3PQ58FF7 597 aa18.35■□□□□ 0.53
BRF1-212ENST00000547562 GIMAP6Q6P9H5 292 aa18.35■□□□□ 0.53
BRF1-212ENST00000547562 SYNE4Q8N205 404 aa18.35■□□□□ 0.53
BRF1-212ENST00000547562 SMARCC2Q8TAQ2 1214 aa18.35■□□□□ 0.53
BRF1-212ENST00000547562 OSBP2Q969R2 916 aa18.35■□□□□ 0.53
BRF1-212ENST00000547562 SLC4A9Q96Q91 983 aa18.35■□□□□ 0.53
BRF1-212ENST00000547562 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.35■□□□□ 0.53
BRF1-212ENST00000547562 RIC1Q4ADV7 1423 aa18.35■□□□□ 0.53
BRF1-212ENST00000547562 ABCC12Q96J65 1359 aa18.35■□□□□ 0.53
BRF1-212ENST00000547562 A0A0G2JLW4 131 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 286.8 ms