RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 BCAR3O75815 825 aa30.32■■■□□ 2.44
RBFOX1-209ENST00000547427 TOMM70O94826 608 aa30.32■■■□□ 2.44
RBFOX1-209ENST00000547427 UFL1O94874 794 aa30.32■■■□□ 2.44
RBFOX1-209ENST00000547427 EPHA10Q5JZY3 1008 aa30.32■■■□□ 2.44
RBFOX1-209ENST00000547427 TBC1D16Q8TBP0 767 aa30.32■■■□□ 2.44
RBFOX1-209ENST00000547427 ARHGAP45Q92619 1136 aa30.32■■■□□ 2.44
RBFOX1-209ENST00000547427 SUCLG2Q96I99 432 aa30.32■■■□□ 2.44
RBFOX1-209ENST00000547427 LTBP1Q14766 1721 aa30.32■■■□□ 2.44
RBFOX1-209ENST00000547427 CCDC57Q2TAC2 916 aa30.31■■■□□ 2.44
RBFOX1-209ENST00000547427 ZNRF3Q9ULT6 936 aa30.31■■■□□ 2.44
RBFOX1-209ENST00000547427 GJA3Q9Y6H8 435 aa30.31■■■□□ 2.44
RBFOX1-209ENST00000547427 TAF7LQ5H9L4 462 aa30.3■■■□□ 2.44
RBFOX1-209ENST00000547427 GPC2Q8N158 579 aa30.3■■■□□ 2.44
RBFOX1-209ENST00000547427 MINPP1Q9UNW1 487 aa30.3■■■□□ 2.44
RBFOX1-209ENST00000547427 ZC3H12CQ9C0D7 883 aaKnown RBP30.29■■■□□ 2.44
RBFOX1-209ENST00000547427 USP44Q9H0E7 712 aa30.29■■■□□ 2.44
RBFOX1-209ENST00000547427 G3V3G9 751 aa30.28■■■□□ 2.44
RBFOX1-209ENST00000547427 DCAF8Q5TAQ9 597 aa30.28■■■□□ 2.44
RBFOX1-209ENST00000547427 GPR101Q96P66 508 aaPredicted RBP30.28■■■□□ 2.44
RBFOX1-209ENST00000547427 SCN4AP35499 1836 aa30.27■■■□□ 2.44
RBFOX1-209ENST00000547427 IQCA1LA6NCM1 817 aa30.27■■■□□ 2.44
RBFOX1-209ENST00000547427 ATP2B4P23634 1241 aa30.27■■■□□ 2.44
RBFOX1-209ENST00000547427 L3MBTL3Q96JM7 780 aaPredicted RBP30.27■■■□□ 2.44
RBFOX1-209ENST00000547427 BICC1Q9H694 974 aaKnown RBP30.27■■■□□ 2.44
RBFOX1-209ENST00000547427 POTECB2RU33 542 aa30.26■■■□□ 2.43
RBFOX1-209ENST00000547427 RBM46Q8TBY0 533 aaKnown RBP30.25■■■□□ 2.43
RBFOX1-209ENST00000547427 KAZALD1Q96I82 304 aa30.25■■■□□ 2.43
RBFOX1-209ENST00000547427 ANKRD2Q9GZV1 360 aa30.25■■■□□ 2.43
RBFOX1-209ENST00000547427 ATF7IPQ6VMQ6 1270 aa30.24■■■□□ 2.43
RBFOX1-209ENST00000547427 DBNDD1Q9H9R9 158 aa30.24■■■□□ 2.43
RBFOX1-209ENST00000547427 UBTFL1P0CB47 393 aaPredicted RBP30.23■■■□□ 2.43
RBFOX1-209ENST00000547427 CXCL9Q07325 125 aa30.23■■■□□ 2.43
RBFOX1-209ENST00000547427 DOK7Q18PE1 504 aa30.23■■■□□ 2.43
RBFOX1-209ENST00000547427 CIAPIN1Q6FI81 312 aa30.23■■■□□ 2.43
RBFOX1-209ENST00000547427 ZNF594Q96JF6 807 aaPredicted RBP30.23■■■□□ 2.43
RBFOX1-209ENST00000547427 HACL1Q9UJ83 578 aa30.23■■■□□ 2.43
RBFOX1-209ENST00000547427 RAD17O75943 681 aa30.22■■■□□ 2.43
RBFOX1-209ENST00000547427 TRIM27P14373 513 aa30.22■■■□□ 2.43
RBFOX1-209ENST00000547427 LMOD1P29536 600 aaPredicted RBP30.22■■■□□ 2.43
RBFOX1-209ENST00000547427 TNIP1Q15025 636 aa30.22■■■□□ 2.43
RBFOX1-209ENST00000547427 ZKSCAN2Q63HK3 967 aa30.22■■■□□ 2.43
RBFOX1-209ENST00000547427 LDHAL6AQ6ZMR3 332 aa30.22■■■□□ 2.43
RBFOX1-209ENST00000547427 ECE2O60344 883 aa30.21■■■□□ 2.43
RBFOX1-209ENST00000547427 CHRNDQ07001 517 aa30.21■■■□□ 2.43
RBFOX1-209ENST00000547427 CLUAP1Q96AJ1 413 aa30.21■■■□□ 2.43
RBFOX1-209ENST00000547427 CNNM1Q9NRU3 951 aa30.21■■■□□ 2.43
RBFOX1-209ENST00000547427 HDAC5Q9UQL6 1122 aa30.21■■■□□ 2.43
RBFOX1-209ENST00000547427 KCNJ4P48050 445 aa30.2■■■□□ 2.43
RBFOX1-209ENST00000547427 RABL6Q3YEC7 729 aaPredicted RBP30.2■■■□□ 2.43
RBFOX1-209ENST00000547427 INTS3Q68E01 1043 aaKnown RBP30.2■■■□□ 2.43
RBFOX1-209ENST00000547427 LEMD3Q9Y2U8 911 aa30.2■■■□□ 2.43
RBFOX1-209ENST00000547427 YDJCA8MPS7 323 aa30.19■■■□□ 2.42
RBFOX1-209ENST00000547427 ANKRD44Q8N8A2 993 aa30.19■■■□□ 2.42
RBFOX1-209ENST00000547427 SMC1BQ8NDV3 1235 aa30.19■■■□□ 2.42
RBFOX1-209ENST00000547427 TAF1DQ9H5J8 278 aaPredicted RBP30.18■■■□□ 2.42
RBFOX1-209ENST00000547427 EPHX2P34913 555 aa30.17■■■□□ 2.42
RBFOX1-209ENST00000547427 FSTL1Q12841 308 aa30.17■■■□□ 2.42
RBFOX1-209ENST00000547427 EAPPQ56P03 285 aaPredicted RBP30.17■■■□□ 2.42
RBFOX1-209ENST00000547427 TNNQ9UQP3 1299 aa30.17■■■□□ 2.42
RBFOX1-209ENST00000547427 ZNF804BA4D1E1 1349 aa30.17■■■□□ 2.42
RBFOX1-209ENST00000547427 WTIPA6NIX2 430 aaPredicted RBP30.16■■■□□ 2.42
RBFOX1-209ENST00000547427 HELBQ8NG08 1087 aaPredicted RBP30.16■■■□□ 2.42
RBFOX1-209ENST00000547427 MED23Q9ULK4 1368 aa30.15■■■□□ 2.42
RBFOX1-209ENST00000547427 PLIN1O60240 522 aa30.15■■■□□ 2.42
RBFOX1-209ENST00000547427 TAF5LO75529 589 aa30.15■■■□□ 2.42
RBFOX1-209ENST00000547427 MEIS3Q99687 375 aa30.15■■■□□ 2.42
RBFOX1-209ENST00000547427 A0A1B0GUL6 1792 aa30.15■■■□□ 2.42
RBFOX1-209ENST00000547427 GNAI3P08754 354 aa30.14■■■□□ 2.42
RBFOX1-209ENST00000547427 SCNN1DP51172 638 aa30.14■■■□□ 2.42
RBFOX1-209ENST00000547427 PNMA8AQ86V59 439 aaPredicted RBP30.14■■■□□ 2.42
RBFOX1-209ENST00000547427 FTSJ3Q8IY81 847 aaKnown RBP30.14■■■□□ 2.42
RBFOX1-209ENST00000547427 PSMD14O00487 310 aa30.13■■■□□ 2.41
RBFOX1-209ENST00000547427 GMPSP49915 693 aaPredicted RBP30.13■■■□□ 2.41
RBFOX1-209ENST00000547427 LRRFIP2Q9Y608 721 aaKnown RBP30.13■■■□□ 2.41
RBFOX1-209ENST00000547427 EPS15P42566 896 aa30.12■■■□□ 2.41
RBFOX1-209ENST00000547427 KCNQ5Q9NR82 932 aa30.12■■■□□ 2.41
RBFOX1-209ENST00000547427 CLEC11AQ9Y240 323 aa30.12■■■□□ 2.41
RBFOX1-209ENST00000547427 SCN9AQ15858 1988 aa30.12■■■□□ 2.41
RBFOX1-209ENST00000547427 POTEIP0CG38 1075 aa30.11■■■□□ 2.41
RBFOX1-209ENST00000547427 POTEJP0CG39 1038 aa30.11■■■□□ 2.41
RBFOX1-209ENST00000547427 PUS3Q9BZE2 481 aaKnown RBP30.11■■■□□ 2.41
RBFOX1-209ENST00000547427 GPRC5DQ9NZD1 345 aa30.11■■■□□ 2.41
RBFOX1-209ENST00000547427 HSPA6P17066 643 aa30.1■■■□□ 2.41
RBFOX1-209ENST00000547427 CHADLQ6NUI6 762 aa30.1■■■□□ 2.41
RBFOX1-209ENST00000547427 PODNQ7Z5L7 613 aa30.1■■■□□ 2.41
RBFOX1-209ENST00000547427 LDHDQ86WU2 507 aa30.1■■■□□ 2.41
RBFOX1-209ENST00000547427 TMEM57Q8N5G2 664 aa30.1■■■□□ 2.41
RBFOX1-209ENST00000547427 DZIP1LQ8IYY4 767 aaKnown RBP30.09■■■□□ 2.41
RBFOX1-209ENST00000547427 ZBTB12Q9Y330 459 aaPredicted RBP30.09■■■□□ 2.41
RBFOX1-209ENST00000547427 MROH5Q6ZUA9 1318 aa30.08■■■□□ 2.41
RBFOX1-209ENST00000547427 SNAP23O00161 211 aa30.08■■■□□ 2.41
RBFOX1-209ENST00000547427 TXNRD3Q86VQ6 643 aa30.08■■■□□ 2.41
RBFOX1-209ENST00000547427 KLHDC4Q8TBB5 520 aa30.08■■■□□ 2.41
RBFOX1-209ENST00000547427 COA1Q9GZY4 146 aa30.08■■■□□ 2.41
RBFOX1-209ENST00000547427 KLRK1P26718 216 aa30.07■■■□□ 2.4
RBFOX1-209ENST00000547427 RIPOR2Q9Y4F9 1068 aa30.07■■■□□ 2.4
RBFOX1-209ENST00000547427 PSME4Q14997 1843 aa30.07■■■□□ 2.4
RBFOX1-209ENST00000547427 RPS12P25398 132 aaKnown RBP30.06■■■□□ 2.4
RBFOX1-209ENST00000547427 LRRC24Q50LG9 513 aa30.06■■■□□ 2.4
RBFOX1-209ENST00000547427 YTHDC1Q96MU7 727 aaKnown RBP30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms