RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, human

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-208	ENST00000547372	CDK19	Q9BWU1	502 aa		13.81	□□□□□ -0.2
RBFOX1-208	ENST00000547372	PLCH2	O75038	1416 aa		13.81	□□□□□ -0.2
RBFOX1-208	ENST00000547372	EIF3J	O75822	258 aa	Known RBP	13.81	□□□□□ -0.2
RBFOX1-208	ENST00000547372	LRRC31	Q6UY01	552 aa		13.81	□□□□□ -0.2
RBFOX1-208	ENST00000547372	GPATCH3	Q96I76	525 aa		13.81	□□□□□ -0.2
RBFOX1-208	ENST00000547372	HYPK	Q9NX55	129 aa		13.81	□□□□□ -0.2
RBFOX1-208	ENST00000547372	AKAP2	Q9Y2D5	859 aa		13.81	□□□□□ -0.2
RBFOX1-208	ENST00000547372	SIL1	Q9H173	461 aa		13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	CAVIN2	O95810	425 aa		13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	ME1	P48163	572 aa		13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	NBPF6	Q5VWK0	638 aa		13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	SARM1	Q6SZW1	724 aa		13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	NBPF11	Q86T75	865 aa		13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	PRPF38A	Q8NAV1	312 aa	Known RBP	13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	NBPF4	Q96M43	638 aa		13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	FAM204A	Q9H8W3	233 aa		13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	ANO10	Q9NW15	660 aa		13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	INO80	Q9ULG1	1556 aa	Predicted RBP	13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	SALL3	Q9BXA9	1300 aa		13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	ATP8B1	O43520	1251 aa		13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	RDX	P35241	583 aa	Known RBP	13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	TTC19	Q6DKK2	380 aa	Predicted RBP	13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	EFCAB13	Q8IY85	973 aa		13.8	□□□□□ -0.2
RBFOX1-208	ENST00000547372	RAB11FIP3	O75154	756 aa		13.79	□□□□□ -0.2
RBFOX1-208	ENST00000547372	SERPINC1	P01008	464 aa		13.79	□□□□□ -0.2
RBFOX1-208	ENST00000547372	CCT5	P48643	541 aa		13.79	□□□□□ -0.2
RBFOX1-208	ENST00000547372	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.79	□□□□□ -0.2
RBFOX1-208	ENST00000547372	WDR24	Q96S15	920 aa		13.79	□□□□□ -0.2
RBFOX1-208	ENST00000547372	NAT10	Q9H0A0	1025 aa	Known RBP	13.79	□□□□□ -0.2
RBFOX1-208	ENST00000547372	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.79	□□□□□ -0.2
RBFOX1-208	ENST00000547372	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.79	□□□□□ -0.2
RBFOX1-208	ENST00000547372	PNPLA6	Q8IY17	1366 aa		13.79	□□□□□ -0.2
RBFOX1-208	ENST00000547372	HNRNPH1	P31943	449 aa	Known RBP	13.79	□□□□□ -0.2
RBFOX1-208	ENST00000547372	GOLGA1	Q92805	767 aa		13.79	□□□□□ -0.2
RBFOX1-208	ENST00000547372	SGSM2	O43147	1006 aa		13.78	□□□□□ -0.2
RBFOX1-208	ENST00000547372	CFAP100	Q494V2	611 aa		13.78	□□□□□ -0.2
RBFOX1-208	ENST00000547372	MKRN1	Q9UHC7	482 aa	Known RBP	13.78	□□□□□ -0.2
RBFOX1-208	ENST00000547372	TPCN1	Q9ULQ1	816 aa		13.78	□□□□□ -0.2
RBFOX1-208	ENST00000547372	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
RBFOX1-208	ENST00000547372	CCT4	P50991	539 aa	Known RBP	13.78	□□□□□ -0.2
RBFOX1-208	ENST00000547372	RBM43	Q6ZSC3	357 aa	Known RBP	13.78	□□□□□ -0.2
RBFOX1-208	ENST00000547372	HDX	Q7Z353	690 aa		13.78	□□□□□ -0.2
RBFOX1-208	ENST00000547372	CLASRP	Q8N2M8	674 aa	Known RBP	13.78	□□□□□ -0.2
RBFOX1-208	ENST00000547372	PARP3	Q9Y6F1	533 aa		13.78	□□□□□ -0.2
RBFOX1-208	ENST00000547372		A0A087WUV0	522 aa	Predicted RBP	13.78	□□□□□ -0.2
RBFOX1-208	ENST00000547372	EPB41L2	O43491	1005 aa	Known RBP	13.78	□□□□□ -0.2
RBFOX1-208	ENST00000547372	DHX40	Q8IX18	779 aa	Known RBP	13.78	□□□□□ -0.2
RBFOX1-208	ENST00000547372	CCDC150	Q8NCX0	1101 aa		13.78	□□□□□ -0.2
RBFOX1-208	ENST00000547372	KIAA0232	Q92628	1395 aa		13.77	□□□□□ -0.2
RBFOX1-208	ENST00000547372	PNMA6E	A0A0J9YXQ4	647 aa		13.77	□□□□□ -0.2
RBFOX1-208	ENST00000547372	PSD	A5PKW4	1024 aa	Predicted RBP	13.77	□□□□□ -0.2
RBFOX1-208	ENST00000547372	GUCY1B3	Q02153	619 aa		13.77	□□□□□ -0.2
RBFOX1-208	ENST00000547372	KAT2B	Q92831	832 aa		13.77	□□□□□ -0.2
RBFOX1-208	ENST00000547372	DHX58	Q96C10	678 aa		13.77	□□□□□ -0.2
RBFOX1-208	ENST00000547372	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.77	□□□□□ -0.2
RBFOX1-208	ENST00000547372	NME9	Q86XW9	330 aa		13.77	□□□□□ -0.21
RBFOX1-208	ENST00000547372	SGSM3	Q96HU1	749 aa		13.77	□□□□□ -0.21
RBFOX1-208	ENST00000547372	CEP89	Q96ST8	783 aa		13.77	□□□□□ -0.21
RBFOX1-208	ENST00000547372	IRX2	Q9BZI1	471 aa	Predicted RBP	13.77	□□□□□ -0.21
RBFOX1-208	ENST00000547372	LSG1	Q9H089	658 aa	Known RBP	13.77	□□□□□ -0.21
RBFOX1-208	ENST00000547372	MED4	Q9NPJ6	270 aa		13.77	□□□□□ -0.21
RBFOX1-208	ENST00000547372	PSD3	Q9NYI0	1048 aa		13.77	□□□□□ -0.21
RBFOX1-208	ENST00000547372	PPP6R1	Q9UPN7	881 aa		13.77	□□□□□ -0.21
RBFOX1-208	ENST00000547372	RIMS2	Q9UQ26	1411 aa		13.77	□□□□□ -0.21
RBFOX1-208	ENST00000547372	KIF1C	O43896	1103 aa	Known RBP	13.77	□□□□□ -0.21
RBFOX1-208	ENST00000547372	WDHD1	O75717	1129 aa	Predicted RBP	13.77	□□□□□ -0.21
RBFOX1-208	ENST00000547372	BLOC1S2	Q6QNY1	142 aa		13.77	□□□□□ -0.21
RBFOX1-208	ENST00000547372	STAP2	Q9UGK3	403 aa		13.77	□□□□□ -0.21
RBFOX1-208	ENST00000547372	USP8	P40818	1118 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	KIRREL3	Q8IZU9	778 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	HINFP	Q9BQA5	517 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	DESI2	Q9BSY9	194 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	UBXN6	Q9BZV1	441 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	ABCB6	Q9NP58	842 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	LZTFL1	Q9NQ48	299 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	TTC21A	Q8NDW8	1320 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	TULP4	Q9NRJ4	1543 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	CCDC196	A0A1B0GTZ2	297 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	FANCG	O15287	622 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	AMPH	P49418	695 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	VPS53	Q5VIR6	699 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	SUGP1	Q8IWZ8	645 aa	Known RBP	13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	FSD1	Q9BTV5	496 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	ZRANB1	Q9UGI0	708 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	JAK2	O60674	1132 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	GSC	P56915	257 aa	Predicted RBP	13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	PTH1R	Q03431	593 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	NAIF1	Q69YI7	327 aa	Predicted RBP	13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	G2E3	Q7L622	706 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	FSIP1	Q8NA03	581 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	ACBD3	Q9H3P7	528 aa		13.76	□□□□□ -0.21
RBFOX1-208	ENST00000547372	ERLIN1	O75477	346 aa		13.75	□□□□□ -0.21
RBFOX1-208	ENST00000547372	TXLNA	P40222	546 aa		13.75	□□□□□ -0.21
RBFOX1-208	ENST00000547372	PPARD	Q03181	441 aa		13.75	□□□□□ -0.21
RBFOX1-208	ENST00000547372	CEP57	Q86XR8	500 aa		13.75	□□□□□ -0.21
RBFOX1-208	ENST00000547372	TTC21B	Q7Z4L5	1316 aa		13.75	□□□□□ -0.21
RBFOX1-208	ENST00000547372	NRXN1	Q9ULB1	1477 aa		13.75	□□□□□ -0.21
RBFOX1-208	ENST00000547372	SETBP1	Q9Y6X0	1596 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms