RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 KRTAP4-11Q9BYQ6 195 aa6.12□□□□□ -1.43
HCFC2-203ENST00000547194 RBM19Q9Y4C8 960 aaKnown RBP6.12□□□□□ -1.43
HCFC2-203ENST00000547194 NRLP54845 237 aa6.11□□□□□ -1.43
HCFC2-203ENST00000547194 ZNF124Q15973 351 aa6.11□□□□□ -1.43
HCFC2-203ENST00000547194 RTN1Q16799 776 aa6.11□□□□□ -1.43
HCFC2-203ENST00000547194 ZNF648Q5T619 568 aaPredicted RBP6.11□□□□□ -1.43
HCFC2-203ENST00000547194 IER5Q5VY09 327 aa6.11□□□□□ -1.43
HCFC2-203ENST00000547194 TP53INP2Q8IXH6 220 aa6.11□□□□□ -1.43
HCFC2-203ENST00000547194 ASIC4Q96FT7 647 aa6.11□□□□□ -1.43
HCFC2-203ENST00000547194 CALR3Q96L12 384 aaKnown RBP6.11□□□□□ -1.43
HCFC2-203ENST00000547194 MFSD14AQ96MC6 490 aa6.11□□□□□ -1.43
HCFC2-203ENST00000547194 CARD10Q9BWT7 1032 aa6.11□□□□□ -1.43
HCFC2-203ENST00000547194 RBSNQ9H1K0 784 aa6.11□□□□□ -1.43
HCFC2-203ENST00000547194 KCNK4Q9NYG8 393 aa6.11□□□□□ -1.43
HCFC2-203ENST00000547194 TFIP11Q9UBB9 837 aaKnown RBP6.11□□□□□ -1.43
HCFC2-203ENST00000547194 DMGDHQ9UI17 866 aaKnown RBP6.11□□□□□ -1.43
HCFC2-203ENST00000547194 LOC102724428A0A0B4J2F2 783 aa6.1□□□□□ -1.43
HCFC2-203ENST00000547194 SART1O43290 800 aaKnown RBP6.1□□□□□ -1.43
HCFC2-203ENST00000547194 DKK1O94907 266 aa6.1□□□□□ -1.43
HCFC2-203ENST00000547194 INPP5BP32019 993 aa6.1□□□□□ -1.43
HCFC2-203ENST00000547194 ARSDP51689 593 aa6.1□□□□□ -1.43
HCFC2-203ENST00000547194 SIK1P57059 783 aa6.1□□□□□ -1.43
HCFC2-203ENST00000547194 C14orf37Q86TY3 774 aa6.1□□□□□ -1.43
HCFC2-203ENST00000547194 LARGE2Q8N3Y3 721 aa6.1□□□□□ -1.43
HCFC2-203ENST00000547194 POU5F2Q8N7G0 328 aa6.1□□□□□ -1.43
HCFC2-203ENST00000547194 DCAF11Q8TEB1 546 aa6.1□□□□□ -1.43
HCFC2-203ENST00000547194 LACRTQ9GZZ8 138 aa6.1□□□□□ -1.43
HCFC2-203ENST00000547194 ZMYND15Q9H091 742 aa6.1□□□□□ -1.43
HCFC2-203ENST00000547194 MAFBQ9Y5Q3 323 aaPredicted RBP6.1□□□□□ -1.43
HCFC2-203ENST00000547194 PALM3A6NDB9 673 aaPredicted RBP6.09□□□□□ -1.43
HCFC2-203ENST00000547194 PSAPP07602 524 aa6.09□□□□□ -1.43
HCFC2-203ENST00000547194 BMP3P12645 472 aa6.09□□□□□ -1.43
HCFC2-203ENST00000547194 DGKZQ13574 1117 aa6.09□□□□□ -1.43
HCFC2-203ENST00000547194 BEND4Q6ZU67 534 aa6.09□□□□□ -1.43
HCFC2-203ENST00000547194 MAP4K3Q8IVH8 894 aa6.09□□□□□ -1.43
HCFC2-203ENST00000547194 FBXL6Q8N531 539 aa6.09□□□□□ -1.43
HCFC2-203ENST00000547194 MYRFLQ96LU7 910 aa6.09□□□□□ -1.43
HCFC2-203ENST00000547194 SRA1Q9HD15 236 aaKnown RBP6.09□□□□□ -1.43
HCFC2-203ENST00000547194 TLR7Q9NYK1 1049 aaKnown RBP6.09□□□□□ -1.43
HCFC2-203ENST00000547194 PPME1Q9Y570 386 aa6.09□□□□□ -1.43
HCFC2-203ENST00000547194 CD68P34810 354 aaPredicted RBP6.08□□□□□ -1.44
HCFC2-203ENST00000547194 DUOXA2Q1HG44 320 aa6.08□□□□□ -1.44
HCFC2-203ENST00000547194 ERICH6Q7L0X2 663 aa6.08□□□□□ -1.44
HCFC2-203ENST00000547194 SIX5Q8N196 739 aa6.08□□□□□ -1.44
HCFC2-203ENST00000547194 CMTR1Q8N1G2 835 aaKnown RBP6.08□□□□□ -1.44
HCFC2-203ENST00000547194 UBASH3BQ8TF42 649 aa6.08□□□□□ -1.44
HCFC2-203ENST00000547194 FAM46AQ96IP4 442 aaKnown RBP6.08□□□□□ -1.44
HCFC2-203ENST00000547194 PPP1R12CQ9BZL4 782 aa6.08□□□□□ -1.44
HCFC2-203ENST00000547194 TIMELESSQ9UNS1 1208 aa6.08□□□□□ -1.44
HCFC2-203ENST00000547194 DDX3YO15523 660 aaKnown RBP6.07□□□□□ -1.44
HCFC2-203ENST00000547194 UVSSAQ2YD98 709 aa6.07□□□□□ -1.44
HCFC2-203ENST00000547194 CLEC10AQ8IUN9 316 aa6.07□□□□□ -1.44
HCFC2-203ENST00000547194 FAM20CQ8IXL6 584 aa6.07□□□□□ -1.44
HCFC2-203ENST00000547194 COL26A1Q96A83 441 aa6.07□□□□□ -1.44
HCFC2-203ENST00000547194 HINFPQ9BQA5 517 aa6.07□□□□□ -1.44
HCFC2-203ENST00000547194 PIM2Q9P1W9 311 aa6.07□□□□□ -1.44
HCFC2-203ENST00000547194 M0R2N6 131 aa6.06□□□□□ -1.44
HCFC2-203ENST00000547194 MMP20O60882 483 aa6.06□□□□□ -1.44
HCFC2-203ENST00000547194 XYLBO75191 536 aa6.06□□□□□ -1.44
HCFC2-203ENST00000547194 RGL4Q8IZJ4 473 aa6.06□□□□□ -1.44
HCFC2-203ENST00000547194 FAM83CQ9BQN1 747 aa6.06□□□□□ -1.44
HCFC2-203ENST00000547194 KRTAP4-5Q9BYR2 181 aa6.06□□□□□ -1.44
HCFC2-203ENST00000547194 ATG3Q9NT62 314 aa6.06□□□□□ -1.44
HCFC2-203ENST00000547194 ZNF777Q9ULD5 760 aaPredicted RBP6.06□□□□□ -1.44
HCFC2-203ENST00000547194 LEMD3Q9Y2U8 911 aa6.06□□□□□ -1.44
HCFC2-203ENST00000547194 MICAL2O94851 1124 aa6.05□□□□□ -1.44
HCFC2-203ENST00000547194 CRTC2Q53ET0 693 aaPredicted RBP6.05□□□□□ -1.44
HCFC2-203ENST00000547194 FBLN7Q53RD9 439 aa6.05□□□□□ -1.44
HCFC2-203ENST00000547194 KANK4Q5T7N3 995 aaPredicted RBP6.05□□□□□ -1.44
HCFC2-203ENST00000547194 KIAA1211Q6ZU35 1233 aa6.05□□□□□ -1.44
HCFC2-203ENST00000547194 CCDC39Q9UFE4 941 aa6.05□□□□□ -1.44
HCFC2-203ENST00000547194 RTCBQ9Y3I0 505 aaKnown RBP6.05□□□□□ -1.44
HCFC2-203ENST00000547194 RXRBP28702 533 aa6.04□□□□□ -1.44
HCFC2-203ENST00000547194 PREPP48147 710 aa6.04□□□□□ -1.44
HCFC2-203ENST00000547194 SEC13P55735 322 aa6.04□□□□□ -1.44
HCFC2-203ENST00000547194 ATP11AP98196 1134 aa6.04□□□□□ -1.44
HCFC2-203ENST00000547194 LARP1Q6PKG0 1096 aaKnown RBP6.04□□□□□ -1.44
HCFC2-203ENST00000547194 STAG2Q8N3U4 1231 aa6.04□□□□□ -1.44
HCFC2-203ENST00000547194 OSBPL1AQ9BXW6 950 aa6.04□□□□□ -1.44
HCFC2-203ENST00000547194 MUC3BQ9H195 1237 aa6.04□□□□□ -1.44
HCFC2-203ENST00000547194 GAS2O43903 313 aaKnown RBP6.03□□□□□ -1.44
HCFC2-203ENST00000547194 LMOD1P29536 600 aaPredicted RBP6.03□□□□□ -1.44
HCFC2-203ENST00000547194 DPYDQ12882 1025 aa6.03□□□□□ -1.44
HCFC2-203ENST00000547194 CEP135Q66GS9 1140 aa6.03□□□□□ -1.44
HCFC2-203ENST00000547194 VRTNQ9H8Y1 702 aa6.03□□□□□ -1.44
HCFC2-203ENST00000547194 FAM196BA6NMK8 535 aa6.02□□□□□ -1.45
HCFC2-203ENST00000547194 PTK7Q13308 1070 aa6.02□□□□□ -1.45
HCFC2-203ENST00000547194 CFAP70Q5T0N1 1121 aa6.02□□□□□ -1.45
HCFC2-203ENST00000547194 SPOCD1Q6ZMY3 1216 aa6.02□□□□□ -1.45
HCFC2-203ENST00000547194 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.02□□□□□ -1.45
HCFC2-203ENST00000547194 CBLL1Q75N03 491 aa6.02□□□□□ -1.45
HCFC2-203ENST00000547194 FLCNQ8NFG4 579 aa6.02□□□□□ -1.45
HCFC2-203ENST00000547194 GIMAP7Q8NHV1 300 aa6.02□□□□□ -1.45
HCFC2-203ENST00000547194 CCER1Q8TC90 406 aaPredicted RBP6.02□□□□□ -1.45
HCFC2-203ENST00000547194 USP17L15C9J2P7 530 aa6.01□□□□□ -1.45
HCFC2-203ENST00000547194 USP17L10C9JJH3 530 aa6.01□□□□□ -1.45
HCFC2-203ENST00000547194 USP17L13C9JLJ4 530 aa6.01□□□□□ -1.45
HCFC2-203ENST00000547194 USP17L12C9JPN9 530 aa6.01□□□□□ -1.45
HCFC2-203ENST00000547194 USP17L11C9JVI0 530 aa6.01□□□□□ -1.45
HCFC2-203ENST00000547194 USP17L21D6R901 530 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms